Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07720

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
1,700,917	+				+0.4
1,700,917	+				+0.1
1,700,917	+				+0.1
1,700,917	+				+0.7
1,700,917	+				+0.9
1,700,917	+				-0.4
1,700,917	+				-2.1
1,700,918	-				-0.3
1,700,918	-				+0.6
1,700,918	-				-0.4
1,700,918	-				+0.5
1,700,918	-				-1.9
1,700,918	-				-1.0
1,700,918	-				+0.6
1,700,920	+				+0.9
1,700,920	+				-1.4
1,700,920	+				-0.0
1,700,920	+				-1.3
1,700,920	+				+0.5
1,700,921	-				-0.6
1,700,921	-				+0.1
1,700,930	-				+0.2
1,700,962	+				+0.3
1,701,067	+				-1.1
1,701,067	+				+1.6
1,701,067	+				-0.7
1,701,068	-				-0.4
1,701,068	-				+0.4
1,701,121	+		AO353_07715	0.10	-1.8
1,701,121	+		AO353_07715	0.10	+1.1
1,701,122	-		AO353_07715	0.11	-1.5
1,701,122	-		AO353_07715	0.11	+1.3
1,701,208	+		AO353_07715	0.27	-0.2
1,701,208	+		AO353_07715	0.27	-1.9
1,701,208	+		AO353_07715	0.27	+1.7
1,701,208	+		AO353_07715	0.27	-1.8
1,701,208	+		AO353_07715	0.27	+0.7
1,701,208	+		AO353_07715	0.27	-0.2
1,701,209	-		AO353_07715	0.27	+0.4
1,701,209	-		AO353_07715	0.27	+0.8
1,701,209	-		AO353_07715	0.27	-0.6
1,701,209	-		AO353_07715	0.27	+0.1
1,701,209	-		AO353_07715	0.27	+0.2
1,701,209	-		AO353_07715	0.27	-0.8
1,701,235	+		AO353_07715	0.32	+0.1
1,701,242	-		AO353_07715	0.33	+0.1
1,701,242	-		AO353_07715	0.33	-0.2
1,701,242	-		AO353_07715	0.33	+0.2
1,701,346	+		AO353_07715	0.53	-1.6
1,701,346	+		AO353_07715	0.53	-0.9
1,701,347	-		AO353_07715	0.53	+1.9
1,701,347	-		AO353_07715	0.53	-0.4
1,701,347	-		AO353_07715	0.53	-2.4
1,701,347	-		AO353_07715	0.53	-0.5
1,701,347	-		AO353_07715	0.53	+1.2
1,701,347	-		AO353_07715	0.53	-1.3
1,701,422	-		AO353_07715	0.67	-0.7
1,701,433	+		AO353_07715	0.69	-0.7
1,701,433	+		AO353_07715	0.69	+1.1
1,701,433	+		AO353_07715	0.69	-1.4
1,701,434	-		AO353_07715	0.69	-0.1
1,701,434	-		AO353_07715	0.69	-0.6
1,701,434	-		AO353_07715	0.69	-1.1
1,701,434	-		AO353_07715	0.69	-0.6
1,701,448	+		AO353_07715	0.72	-1.3
1,701,449	-		AO353_07715	0.72	-1.0
1,701,514	+		AO353_07715	0.84	+0.0
1,701,514	+		AO353_07715	0.84	-2.1
1,701,514	+		AO353_07715	0.84	+0.3
1,701,514	+		AO353_07715	0.84	-1.8
1,701,514	+		AO353_07715	0.84	-0.9
1,701,514	+		AO353_07715	0.84	-1.2
1,701,514	+		AO353_07715	0.84	+0.1
1,701,514	+		AO353_07715	0.84	-2.4
1,701,514	+		AO353_07715	0.84	+0.6
1,701,514	+		AO353_07715	0.84	+1.1
1,701,515	-		AO353_07715	0.85	-0.9
1,701,515	-		AO353_07715	0.85	-0.2
1,701,515	-		AO353_07715	0.85	-0.7
1,701,515	-		AO353_07715	0.85	+0.3
1,701,515	-		AO353_07715	0.85	-1.2
1,701,515	-		AO353_07715	0.85	+0.2
1,701,515	-		AO353_07715	0.85	+0.6
1,701,515	-		AO353_07715	0.85	-1.8
1,701,515	-		AO353_07715	0.85	+0.5
1,701,515	-		AO353_07715	0.85	-0.4
1,701,515	-		AO353_07715	0.85	+0.9
1,701,515	-		AO353_07715	0.85	+0.1
1,701,605	-				-1.6
1,701,605	-				+0.1
1,701,605	-				-1.4
1,701,667	+				+1.3
1,701,668	-				-0.1
1,701,668	-				-1.4
1,701,677	+				-1.7
1,701,677	+				-1.1
1,701,678	-				+0.1
1,701,678	-				-1.0
1,701,736	+				+0.2
1,701,737	-				-0.3
1,701,852	-		AO353_07720	0.18	+0.6
1,701,873	-		AO353_07720	0.20	-0.3
1,701,954	-		AO353_07720	0.28	+1.4
1,701,954	-		AO353_07720	0.28	-2.1
1,701,954	-		AO353_07720	0.28	-0.1
1,701,954	-		AO353_07720	0.28	+0.6
1,701,954	-		AO353_07720	0.28	+0.3
1,701,972	-		AO353_07720	0.30	-0.2
1,701,993	+		AO353_07720	0.32	-0.6
1,701,994	-		AO353_07720	0.33	-0.1
1,702,121	+		AO353_07720	0.46	-0.7
1,702,121	+		AO353_07720	0.46	-1.2
1,702,121	+		AO353_07720	0.46	+1.3
1,702,121	+		AO353_07720	0.46	+0.3
1,702,122	-		AO353_07720	0.46	-0.2
1,702,122	-		AO353_07720	0.46	+2.1
1,702,122	-		AO353_07720	0.46	+1.4
1,702,262	+		AO353_07720	0.60	-1.9
1,702,262	+		AO353_07720	0.60	+0.2
1,702,262	+		AO353_07720	0.60	+0.3
1,702,263	-		AO353_07720	0.60	+0.8
1,702,263	-		AO353_07720	0.60	+0.5
1,702,263	-		AO353_07720	0.60	+0.6
1,702,263	-		AO353_07720	0.60	+0.1
1,702,295	+				+0.1
1,702,295	+				+0.1
1,702,295	+		AO353_07720	0.63	-0.6
1,702,295	+		AO353_07720	0.63	+0.7
1,702,295	+		AO353_07720	0.63	+2.0
1,702,295	+		AO353_07720	0.63	+1.4
1,702,295	+		AO353_07720	0.63	-0.6
1,702,295	+		AO353_07720	0.63	-0.3
1,702,295	+		AO353_07720	0.63	-0.7
1,702,295	+		AO353_07720	0.63	+0.8
1,702,295	+		AO353_07720	0.63	-0.3
1,702,295	+		AO353_07720	0.63	+1.0
1,702,296	-		AO353_07720	0.63	+0.7
1,702,296	-		AO353_07720	0.63	+0.5
1,702,296	-		AO353_07720	0.63	+0.6
1,702,296	-		AO353_07720	0.63	-1.7
1,702,296	-		AO353_07720	0.63	+1.0
1,702,296	-		AO353_07720	0.63	+1.1
1,702,312	-		AO353_07720	0.65	+0.2
1,702,343	+		AO353_07720	0.68	-0.8
1,702,343	+		AO353_07720	0.68	+0.1
1,702,343	+		AO353_07720	0.68	-0.6
1,702,344	-		AO353_07720	0.68	+1.0
1,702,344	-		AO353_07720	0.68	-0.2
1,702,344	-		AO353_07720	0.68	-2.2
1,702,569	+				-0.0
1,702,569	+				+0.4
1,702,569	+				+1.3
1,702,570	-				-0.8
1,702,570	-				+0.3
1,702,570	-				+0.1
1,702,602	+				+0.1
1,702,602	+				+0.6
1,702,602	+				-0.5
1,702,603	-				+0.2
1,702,666	+				+0.1
1,702,667	-				-0.9
1,702,667	-				-1.3
1,702,667	-				-0.5
1,702,670	-				+0.3
1,702,714	+				+0.8
1,702,714	+				-1.4
1,702,714	+				+0.9
1,702,714	+				-1.2
1,702,714	+				-0.2
1,702,714	+				-0.7
1,702,714	+				-0.4
1,702,714	+				-0.9
1,702,714	+				+1.1
1,702,714	+				-0.2
1,702,714	+				+0.3
1,702,714	+				-2.2
1,702,715	-				+1.1
1,702,715	-				-0.4
1,702,715	-				+0.6
1,702,715	-				-0.7
1,702,715	-				+1.9
1,702,715	-				-1.2
1,702,715	-				+0.3
1,702,715	-				+0.1
1,702,715	-				+0.1
1,702,715	-				-2.1
1,702,715	-				+0.5
1,702,715	-				+0.8
1,702,775	+				+1.1
1,702,776	-				+0.9
1,702,828	+				-0.2
1,702,828	+				+1.2
1,702,828	+				+0.9
1,702,829	-				+1.7
1,702,829	-				+1.1
1,702,829	-				+0.4
1,702,932	+		AO353_07725	0.11	-0.3
1,702,932	+		AO353_07725	0.11	-1.6
1,702,933	-		AO353_07725	0.11	-1.1
1,703,009	+		AO353_07725	0.30	+1.1
1,703,009	+		AO353_07725	0.30	+0.8
1,703,009	+		AO353_07725	0.30	-0.2
1,703,009	+		AO353_07725	0.30	+0.1
1,703,009	+		AO353_07725	0.30	+0.6
1,703,009	+		AO353_07725	0.30	+0.2
1,703,009	+		AO353_07725	0.30	-0.1
1,703,009	+		AO353_07725	0.30	+1.7
1,703,009	+		AO353_07725	0.30	+1.4
1,703,009	+		AO353_07725	0.30	-0.2
1,703,009	+		AO353_07725	0.30	+0.3
1,703,009	+		AO353_07725	0.30	+0.1
1,703,010	-		AO353_07725	0.30	+0.0
1,703,010	-		AO353_07725	0.30	+0.5
1,703,010	-		AO353_07725	0.30	-0.2
1,703,010	-		AO353_07725	0.30	-1.4
1,703,010	-		AO353_07725	0.30	-0.1
1,703,010	-		AO353_07725	0.30	+0.4
1,703,010	-		AO353_07725	0.30	-0.6
1,703,010	-		AO353_07725	0.30	+2.0
1,703,010	-		AO353_07725	0.30	-0.8
1,703,010	-		AO353_07725	0.30	+1.1
1,703,010	-		AO353_07725	0.30	+2.3
1,703,011	+		AO353_07725	0.30	+0.3
1,703,012	-		AO353_07725	0.31	+1.2
1,703,012	-		AO353_07725	0.31	+1.6
1,703,061	+		AO353_07725	0.43	-0.4
1,703,061	+		AO353_07725	0.43	+1.8
1,703,061	+		AO353_07725	0.43	+1.1
1,703,061	+		AO353_07725	0.43	+0.1
1,703,061	+		AO353_07725	0.43	-0.2
1,703,061	+		AO353_07725	0.43	-0.3
1,703,061	+		AO353_07725	0.43	-1.4
1,703,061	+		AO353_07725	0.43	+2.1
1,703,061	+		AO353_07725	0.43	-2.6
1,703,061	+		AO353_07725	0.43	+1.6
1,703,062	-		AO353_07725	0.43	+0.3
1,703,062	-		AO353_07725	0.43	-0.0
1,703,062	-		AO353_07725	0.43	-1.9
1,703,062	-		AO353_07725	0.43	+2.4
1,703,210	+		AO353_07725	0.80	-0.6
1,703,210	+				+1.6
1,703,210	+		AO353_07725	0.80	+0.7
1,703,210	+		AO353_07725	0.80	+0.1
1,703,210	+		AO353_07725	0.80	+0.7
1,703,210	+		AO353_07725	0.80	-1.2
1,703,211	-		AO353_07725	0.80	+0.1
1,703,211	-		AO353_07725	0.80	-0.9
1,703,211	-		AO353_07725	0.80	-1.7
1,703,211	-		AO353_07725	0.80	-0.7
1,703,211	-		AO353_07725	0.80	-0.2
1,703,289	-				-0.2
1,703,289	-				-1.1
1,703,300	+				+0.1
1,703,300	+				-0.1
1,703,301	-				+0.1
1,703,301	-				-1.0
1,703,301	-				-1.9