Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05830

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
1,285,604	+				-0.2
1,285,604	+				+0.1
1,285,604	+				-1.9
1,285,605	-				-0.2
1,285,605	-				-0.5
1,285,610	+				-0.8
1,285,610	+				+0.1
1,285,611	-				-1.3
1,285,611	-				+0.1
1,285,654	+				-2.2
1,285,654	+				-1.9
1,285,655	-				-0.7
1,285,655	-				+1.2
1,285,655	-				-2.2
1,285,655	-				+0.9
1,285,655	-				+1.9
1,285,748	+				+1.3
1,285,748	+				+0.6
1,285,748	+				+0.8
1,285,748	+				+1.0
1,285,748	+				+0.7
1,285,748	+				-1.8
1,285,748	+				+0.4
1,285,749	-				+0.4
1,285,749	-				-0.8
1,285,749	-				-1.0
1,285,749	-				+0.5
1,285,749	-				-0.7
1,285,749	-				+0.5
1,285,749	-				+1.0
1,285,749	-				+0.4
1,285,749	-				-1.0
1,285,749	-				+0.2
1,285,749	-				+1.2
1,285,749	-				-0.6
1,285,749	-				-1.9
1,285,749	-				-0.6
1,285,749	-				+0.7
1,285,749	-				-0.2
1,285,749	-				+0.3
1,285,749	-				-0.2
1,285,759	+				+0.2
1,285,759	+				+0.5
1,285,759	+				+2.0
1,285,759	+				-0.8
1,285,759	+				-0.0
1,285,759	+				-0.1
1,285,759	+				+1.3
1,285,759	+				-0.5
1,285,759	+				-0.5
1,285,759	+				-0.8
1,285,759	+				+1.6
1,285,759	+				-0.2
1,285,759	+				+0.4
1,285,759	+				+0.5
1,285,759	+				-0.7
1,285,759	+				+1.7
1,285,759	+				-1.2
1,285,759	+				+0.0
1,285,759	+				+0.3
1,285,759	+				-1.5
1,285,759	+				+0.5
1,285,760	-				-1.2
1,285,760	-				+0.2
1,285,760	-				-0.6
1,285,760	-				-1.8
1,285,760	-				-0.4
1,285,760	-				-0.3
1,285,760	-				+0.9
1,285,760	-				+0.0
1,285,760	-				-0.3
1,285,760	-				-0.2
1,285,760	-				+0.3
1,285,760	-				-0.2
1,285,760	-				-0.1
1,285,760	-				-0.5
1,285,760	-				+3.0
1,285,760	-				-0.8
1,285,760	-				+0.0
1,285,760	-				-0.8
1,285,761	+				+2.6
1,285,761	+				-2.1
1,285,761	+				+0.7
1,285,761	+				+0.0
1,285,761	+				-0.7
1,285,761	+				+1.8
1,285,761	+				+1.0
1,285,762	-				+0.4
1,285,762	-				+0.4
1,285,762	-				+0.2
1,285,762	-				+0.2
1,285,762	-				+0.2
1,285,762	-				+1.3
1,285,762	-				+1.4
1,285,762	-				-0.7
1,286,066	+		AO353_05825	0.42	-0.8
1,286,067	-		AO353_05825	0.42	+0.8
1,286,092	+		AO353_05825	0.45	-1.1
1,286,092	+		AO353_05825	0.45	+0.3
1,286,092	+		AO353_05825	0.45	+0.6
1,286,093	-		AO353_05825	0.45	+0.4
1,286,093	-		AO353_05825	0.45	+0.9
1,286,159	+		AO353_05825	0.52	+1.0
1,286,160	-		AO353_05825	0.52	-0.8
1,286,160	-		AO353_05825	0.52	-1.2
1,286,256	+		AO353_05825	0.63	-1.4
1,286,256	+		AO353_05825	0.63	-2.0
1,286,256	+		AO353_05825	0.63	-0.3
1,286,256	+		AO353_05825	0.63	-1.6
1,286,256	+		AO353_05825	0.63	-1.9
1,286,257	-		AO353_05825	0.63	-0.2
1,286,257	-		AO353_05825	0.63	+0.2
1,286,257	-		AO353_05825	0.63	-1.2
1,286,257	-		AO353_05825	0.63	+2.8
1,286,257	-		AO353_05825	0.63	+0.1
1,286,257	-		AO353_05825	0.63	-1.6
1,286,257	-		AO353_05825	0.63	-0.3
1,286,257	-		AO353_05825	0.63	-1.6
1,286,257	-		AO353_05825	0.63	-1.7
1,286,300	+		AO353_05825	0.68	-1.0
1,286,300	+		AO353_05825	0.68	+1.3
1,286,300	+		AO353_05825	0.68	+2.0
1,286,300	+		AO353_05825	0.68	-0.8
1,286,300	+		AO353_05825	0.68	+0.2
1,286,300	+		AO353_05825	0.68	-2.2
1,286,300	+				-0.6
1,286,300	+		AO353_05825	0.68	+0.2
1,286,300	+		AO353_05825	0.68	-0.8
1,286,300	+		AO353_05825	0.68	-1.5
1,286,300	+		AO353_05825	0.68	-1.6
1,286,300	+		AO353_05825	0.68	-1.2
1,286,301	-		AO353_05825	0.68	-0.5
1,286,301	-		AO353_05825	0.68	-0.3
1,286,301	-		AO353_05825	0.68	-0.8
1,286,301	-		AO353_05825	0.68	-1.9
1,286,301	-		AO353_05825	0.68	+0.7
1,286,301	-		AO353_05825	0.68	+1.6
1,286,301	-		AO353_05825	0.68	+0.3
1,286,301	-		AO353_05825	0.68	+0.8
1,286,317	-		AO353_05825	0.70	-1.0
1,286,326	+		AO353_05825	0.71	+1.0
1,286,431	-		AO353_05825	0.83	-1.3
1,286,452	+		AO353_05825	0.85	-1.0
1,286,453	-		AO353_05825	0.85	+0.4
1,286,512	+				+0.1
1,286,513	-				-1.3
1,286,513	-				+1.3
1,286,642	+		AO353_05830	0.12	-0.3
1,286,642	+		AO353_05830	0.12	+1.8
1,286,642	+		AO353_05830	0.12	-0.2
1,286,642	+		AO353_05830	0.12	+1.3
1,286,642	+		AO353_05830	0.12	+0.1
1,286,642	+		AO353_05830	0.12	+1.8
1,286,642	+		AO353_05830	0.12	+0.9
1,286,643	-		AO353_05830	0.12	-2.4
1,286,643	-		AO353_05830	0.12	+0.5
1,286,643	-		AO353_05830	0.12	-0.2
1,286,643	-		AO353_05830	0.12	-1.3
1,286,643	-		AO353_05830	0.12	+1.2
1,286,643	-		AO353_05830	0.12	+1.6
1,286,643	-		AO353_05830	0.12	+0.1
1,286,689	-		AO353_05830	0.20	+0.5
1,286,689	-		AO353_05830	0.20	-0.5
1,286,729	-		AO353_05830	0.27	-0.2
1,286,732	+		AO353_05830	0.28	-2.1
1,286,732	+		AO353_05830	0.28	-1.0
1,286,732	+		AO353_05830	0.28	-0.3
1,286,732	+		AO353_05830	0.28	-0.0
1,286,732	+		AO353_05830	0.28	-0.6
1,286,732	+		AO353_05830	0.28	-0.6
1,286,732	+		AO353_05830	0.28	+0.2
1,286,732	+		AO353_05830	0.28	+0.2
1,286,732	+		AO353_05830	0.28	-0.5
1,286,732	+		AO353_05830	0.28	-1.1
1,286,732	+		AO353_05830	0.28	+1.2
1,286,732	+		AO353_05830	0.28	-1.0
1,286,732	+		AO353_05830	0.28	+0.4
1,286,732	+		AO353_05830	0.28	+1.1
1,286,732	+		AO353_05830	0.28	+0.2
1,286,733	-		AO353_05830	0.28	+0.4
1,286,733	-		AO353_05830	0.28	-0.1
1,286,733	-		AO353_05830	0.28	-0.8
1,286,733	-		AO353_05830	0.28	+0.3
1,286,733	-		AO353_05830	0.28	-0.6
1,286,733	-		AO353_05830	0.28	-1.9
1,286,767	+		AO353_05830	0.34	-0.3
1,286,767	+		AO353_05830	0.34	+0.2
1,286,767	+		AO353_05830	0.34	+0.2
1,286,767	+		AO353_05830	0.34	-2.2
1,286,767	+		AO353_05830	0.34	+0.6
1,286,767	+		AO353_05830	0.34	+0.6
1,286,767	+		AO353_05830	0.34	+1.8
1,286,768	-		AO353_05830	0.34	-0.5
1,286,768	-		AO353_05830	0.34	+0.9
1,286,768	-		AO353_05830	0.34	-1.3
1,286,768	-		AO353_05830	0.34	-0.9
1,286,768	-		AO353_05830	0.34	+1.8
1,286,768	-		AO353_05830	0.34	+1.5
1,286,768	-		AO353_05830	0.34	+1.3
1,286,768	-		AO353_05830	0.34	+1.1
1,286,768	-		AO353_05830	0.34	-0.8
1,286,862	+		AO353_05830	0.51	+1.2
1,286,862	+		AO353_05830	0.51	-0.3
1,286,862	+		AO353_05830	0.51	-2.5
1,286,862	+		AO353_05830	0.51	-0.1
1,286,863	-		AO353_05830	0.51	+0.4
1,286,863	-		AO353_05830	0.51	-0.6
1,286,863	-		AO353_05830	0.51	-0.0
1,286,863	-		AO353_05830	0.51	+0.7
1,286,863	-		AO353_05830	0.51	+2.3
1,286,863	-		AO353_05830	0.51	-0.6
1,286,943	+		AO353_05830	0.65	+1.3
1,286,943	+		AO353_05830	0.65	+0.4
1,286,943	+		AO353_05830	0.65	-1.6
1,286,943	+		AO353_05830	0.65	+1.5
1,286,943	+		AO353_05830	0.65	+0.4
1,286,944	-		AO353_05830	0.65	+0.2
1,286,944	-		AO353_05830	0.65	+1.2
1,286,944	-		AO353_05830	0.65	+0.5
1,286,944	-		AO353_05830	0.65	-0.0
1,286,944	-		AO353_05830	0.65	-1.8
1,287,004	+		AO353_05830	0.76	-0.0
1,287,004	+		AO353_05830	0.76	+0.2
1,287,004	+		AO353_05830	0.76	+0.4
1,287,004	+		AO353_05830	0.76	+0.2
1,287,004	+		AO353_05830	0.76	+0.9
1,287,005	-		AO353_05830	0.76	-2.0
1,287,005	-		AO353_05830	0.76	-0.5
1,287,005	-		AO353_05830	0.76	+0.7
1,287,005	-		AO353_05830	0.76	+0.3
1,287,005	-		AO353_05830	0.76	+1.4
1,287,005	-		AO353_05830	0.76	+0.8
1,287,006	+		AO353_05830	0.76	+0.6
1,287,006	+		AO353_05830	0.76	+1.0
1,287,006	+		AO353_05830	0.76	+1.3
1,287,007	-		AO353_05830	0.76	-0.5
1,287,007	-		AO353_05830	0.76	-1.9
1,287,007	-		AO353_05830	0.76	-0.2
1,287,007	-		AO353_05830	0.76	-1.2
1,287,007	-		AO353_05830	0.76	+1.0
1,287,007	-		AO353_05830	0.76	+1.7
1,287,022	+		AO353_05830	0.79	+0.9
1,287,022	+		AO353_05830	0.79	-1.9
1,287,064	-		AO353_05830	0.86	+0.5
1,287,064	-		AO353_05830	0.86	+0.1
1,287,132	+				-0.6
1,287,132	+				-0.1
1,287,132	+				+1.6
1,287,235	+				+0.2
1,287,235	+				-0.3
1,287,235	+				-0.3
1,287,235	+				+1.1
1,287,235	+				+1.4
1,287,235	+				-0.2
1,287,235	+				-0.8
1,287,235	+				+0.7
1,287,235	+				+0.6
1,287,235	+				+0.2
1,287,235	+				-1.0
1,287,235	+				-0.3
1,287,235	+				+0.1
1,287,236	-				+0.0
1,287,236	-				-1.0
1,287,236	-				-1.0
1,287,236	-				+0.4
1,287,236	-				+0.2
1,287,236	-				+1.1
1,287,236	-				-0.0
1,287,236	-				-0.7
1,287,236	-				+0.2
1,287,236	-				-0.5
1,287,236	-				-0.2
1,287,236	-				-0.3
1,287,236	-				+0.2
1,287,267	+				-0.0
1,287,268	-				+1.2
1,287,268	-				+0.6
1,287,268	-				+2.0
1,287,268	-				-0.5
1,287,268	-				+0.9
1,287,268	-				+1.4
1,287,268	-				-0.3
1,287,268	-				-0.8
1,287,268	-				-1.4
1,287,290	+				+0.1
1,287,290	+				-0.3
1,287,290	+				+1.5
1,287,290	+				-0.0
1,287,291	-				-1.6
1,287,300	+				+1.9
1,287,301	-				+1.4
1,287,301	-				-0.8
1,287,318	+				-0.5
1,287,355	+				+0.6
1,287,355	+				-0.3
1,287,356	-				+1.7
1,287,373	+				-1.0
1,287,373	+				+1.6
1,287,373	+				-1.8
1,287,374	-				-1.9
1,287,374	-				-0.0
1,287,374	-				+0.8
1,287,374	-				-1.4
1,287,374	-				-0.4
1,287,374	-				-0.4
1,287,628	+		AO353_05835	0.13	-0.2
1,287,629	-		AO353_05835	0.13	+0.0
1,287,629	-		AO353_05835	0.13	-2.2
1,287,629	-		AO353_05835	0.13	-0.7
1,287,908	-		AO353_05835	0.33	-2.2
1,287,908	-		AO353_05835	0.33	-0.7
1,287,958	+		AO353_05835	0.37	+0.6
1,287,959	-		AO353_05835	0.37	+1.2
1,287,959	-		AO353_05835	0.37	+0.6
1,287,974	-		AO353_05835	0.38	-1.3
1,288,035	+		AO353_05835	0.42	-0.3
1,288,035	+		AO353_05835	0.42	-0.1
1,288,036	-		AO353_05835	0.42	+0.2
1,288,036	-		AO353_05835	0.42	-1.5
1,288,079	+		AO353_05835	0.45	-2.0
1,288,079	+		AO353_05835	0.45	-0.4
1,288,079	+		AO353_05835	0.45	-0.8
1,288,079	+		AO353_05835	0.45	-0.3
1,288,079	+		AO353_05835	0.45	+2.3
1,288,079	+		AO353_05835	0.45	-0.2
1,288,079	+		AO353_05835	0.45	+0.7
1,288,079	+		AO353_05835	0.45	-1.4
1,288,079	+		AO353_05835	0.45	-0.5
1,288,079	+		AO353_05835	0.45	+1.6
1,288,079	+		AO353_05835	0.45	-0.5
1,288,079	+		AO353_05835	0.45	+2.0
1,288,079	+		AO353_05835	0.45	+0.5
1,288,080	-		AO353_05835	0.45	+0.0
1,288,080	-		AO353_05835	0.45	-0.6
1,288,080	-		AO353_05835	0.45	-0.8
1,288,080	-		AO353_05835	0.45	-0.6
1,288,080	-		AO353_05835	0.45	+0.4
1,288,080	-		AO353_05835	0.45	+0.4
1,288,080	-		AO353_05835	0.45	+1.0
1,288,080	-		AO353_05835	0.45	-0.2
1,288,080	-		AO353_05835	0.45	+2.3
1,288,080	-		AO353_05835	0.45	+0.0
1,288,080	-		AO353_05835	0.45	-0.2
1,288,080	-		AO353_05835	0.45	+0.0
1,288,080	-		AO353_05835	0.45	+1.7
1,288,080	-		AO353_05835	0.45	-1.0
1,288,080	-		AO353_05835	0.45	+0.6
1,288,080	-		AO353_05835	0.45	+1.5
1,288,131	+		AO353_05835	0.49	-0.3
1,288,131	+		AO353_05835	0.49	-0.9
1,288,131	+		AO353_05835	0.49	-0.2
1,288,131	+		AO353_05835	0.49	-0.2
1,288,131	+		AO353_05835	0.49	+0.3
1,288,131	+		AO353_05835	0.49	-0.2
1,288,131	+		AO353_05835	0.49	-0.4
1,288,131	+		AO353_05835	0.49	+0.8
1,288,131	+		AO353_05835	0.49	-0.7
1,288,131	+		AO353_05835	0.49	+0.1
1,288,131	+		AO353_05835	0.49	-0.5
1,288,132	-		AO353_05835	0.49	-0.1
1,288,132	-		AO353_05835	0.49	-0.6
1,288,132	-		AO353_05835	0.49	+0.4
1,288,132	-		AO353_05835	0.49	-1.1
1,288,132	-		AO353_05835	0.49	-0.2
1,288,132	-		AO353_05835	0.49	+1.2
1,288,132	-		AO353_05835	0.49	+0.7
1,288,132	-		AO353_05835	0.49	+0.0
1,288,132	-		AO353_05835	0.49	-0.2
1,288,132	-		AO353_05835	0.49	+0.5
1,288,132	-		AO353_05835	0.49	+0.3
1,288,132	-		AO353_05835	0.49	-1.1
1,288,132	-		AO353_05835	0.49	+1.0
1,288,132	-		AO353_05835	0.49	-0.9
1,288,132	-		AO353_05835	0.49	-1.5
1,288,132	-		AO353_05835	0.49	-0.6
1,288,132	-		AO353_05835	0.49	+0.4
1,288,132	-		AO353_05835	0.49	-0.1
1,288,132	-		AO353_05835	0.49	-0.2