Experiment: Chlorite 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS17865 and ABZR86_RS17870 are separated by 211 nucleotides ABZR86_RS17870 and ABZR86_RS17875 are separated by 142 nucleotides ABZR86_RS17875 and ABZR86_RS17880 are separated by 59 nucleotides
ABZR86_RS17865: ABZR86_RS17865 - MFS transporter, at 4,028,178 to 4,029,695
_RS17865
ABZR86_RS17870: ABZR86_RS17870 - LysR family transcriptional regulator, at 4,029,907 to 4,030,773
_RS17870
ABZR86_RS17875: ABZR86_RS17875 - hypothetical protein, at 4,030,916 to 4,031,515
_RS17875
ABZR86_RS17880: ABZR86_RS17880 - hypothetical protein, at 4,031,575 to 4,032,057
_RS17880
Position (kb)
4029
4030
4031 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4028.959 kb on + strand, within ABZR86_RS17865 at 4029.067 kb on - strand, within ABZR86_RS17865 at 4029.084 kb on + strand, within ABZR86_RS17865 at 4029.084 kb on + strand, within ABZR86_RS17865 at 4029.085 kb on - strand, within ABZR86_RS17865 at 4029.085 kb on - strand, within ABZR86_RS17865 at 4029.085 kb on - strand, within ABZR86_RS17865 at 4029.532 kb on + strand, within ABZR86_RS17865 at 4029.532 kb on + strand, within ABZR86_RS17865 at 4029.701 kb on - strand at 4029.772 kb on + strand at 4029.772 kb on + strand at 4029.773 kb on - strand at 4029.834 kb on - strand at 4030.057 kb on + strand, within ABZR86_RS17870 at 4030.112 kb on - strand, within ABZR86_RS17870 at 4030.569 kb on - strand, within ABZR86_RS17870 at 4030.569 kb on - strand, within ABZR86_RS17870 at 4030.771 kb on + strand at 4030.772 kb on - strand at 4030.786 kb on + strand at 4030.787 kb on - strand at 4030.874 kb on + strand at 4030.874 kb on + strand at 4030.875 kb on - strand at 4030.884 kb on + strand at 4030.884 kb on + strand at 4030.936 kb on - strand at 4030.936 kb on - strand at 4030.936 kb on - strand at 4031.136 kb on - strand, within ABZR86_RS17875 at 4031.435 kb on - strand, within ABZR86_RS17875 at 4031.483 kb on + strand at 4031.483 kb on + strand at 4031.483 kb on + strand at 4031.487 kb on + strand at 4031.487 kb on + strand at 4031.488 kb on - strand at 4031.488 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.32 mM remove 4,028,959 + ABZR86_RS17865 0.51 +0.7 4,029,067 - ABZR86_RS17865 0.59 +0.0 4,029,084 + ABZR86_RS17865 0.60 -0.4 4,029,084 + ABZR86_RS17865 0.60 +1.0 4,029,085 - ABZR86_RS17865 0.60 +2.6 4,029,085 - ABZR86_RS17865 0.60 -0.1 4,029,085 - ABZR86_RS17865 0.60 -0.4 4,029,532 + ABZR86_RS17865 0.89 +1.2 4,029,532 + ABZR86_RS17865 0.89 -0.2 4,029,701 - -0.1 4,029,772 + +0.3 4,029,772 + +0.0 4,029,773 - +0.9 4,029,834 - -0.7 4,030,057 + ABZR86_RS17870 0.17 +0.2 4,030,112 - ABZR86_RS17870 0.24 +0.2 4,030,569 - ABZR86_RS17870 0.76 -0.2 4,030,569 - ABZR86_RS17870 0.76 +1.6 4,030,771 + +0.3 4,030,772 - +0.2 4,030,786 + -1.1 4,030,787 - +0.5 4,030,874 + +1.5 4,030,874 + -0.2 4,030,875 - -0.2 4,030,884 + +0.1 4,030,884 + -1.5 4,030,936 - -0.1 4,030,936 - +0.3 4,030,936 - +0.2 4,031,136 - ABZR86_RS17875 0.37 -0.3 4,031,435 - ABZR86_RS17875 0.86 -0.4 4,031,483 + -0.5 4,031,483 + -0.5 4,031,483 + -0.1 4,031,487 + -1.3 4,031,487 + +1.0 4,031,488 - -1.9 4,031,488 - +0.0
Or see this region's nucleotide sequence