Experiment: Chlorite 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS12675 and ABZR86_RS12680 overlap by 4 nucleotides ABZR86_RS12680 and ABZR86_RS12685 are separated by 55 nucleotides ABZR86_RS12685 and ABZR86_RS12690 are separated by 593 nucleotides
ABZR86_RS12675: ABZR86_RS12675 - DUF692 domain-containing protein, at 2,842,505 to 2,843,353
_RS12675
ABZR86_RS12680: ABZR86_RS12680 - DNA-binding domain-containing protein, at 2,843,350 to 2,844,135
_RS12680
ABZR86_RS12685: ABZR86_RS12685 - AraC family transcriptional regulator, at 2,844,191 to 2,845,090
_RS12685
ABZR86_RS12690: ABZR86_RS12690 - peptidyl-dipeptidase Dcp, at 2,845,684 to 2,847,876
_RS12690
Position (kb)
2844
2845
2846 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2843.471 kb on - strand, within ABZR86_RS12680 at 2843.599 kb on + strand, within ABZR86_RS12680 at 2843.599 kb on + strand, within ABZR86_RS12680 at 2843.599 kb on + strand, within ABZR86_RS12680 at 2843.599 kb on + strand, within ABZR86_RS12680 at 2843.599 kb on + strand, within ABZR86_RS12680 at 2843.600 kb on - strand, within ABZR86_RS12680 at 2843.600 kb on - strand, within ABZR86_RS12680 at 2843.600 kb on - strand, within ABZR86_RS12680 at 2843.600 kb on - strand, within ABZR86_RS12680 at 2843.644 kb on + strand, within ABZR86_RS12680 at 2843.645 kb on - strand, within ABZR86_RS12680 at 2843.796 kb on - strand, within ABZR86_RS12680 at 2844.134 kb on - strand at 2844.302 kb on + strand, within ABZR86_RS12685 at 2844.302 kb on + strand, within ABZR86_RS12685 at 2844.303 kb on - strand, within ABZR86_RS12685 at 2844.303 kb on - strand, within ABZR86_RS12685 at 2844.303 kb on - strand, within ABZR86_RS12685 at 2844.335 kb on + strand, within ABZR86_RS12685 at 2844.711 kb on + strand, within ABZR86_RS12685 at 2844.719 kb on + strand, within ABZR86_RS12685 at 2844.720 kb on - strand, within ABZR86_RS12685 at 2844.914 kb on + strand, within ABZR86_RS12685 at 2844.914 kb on + strand, within ABZR86_RS12685 at 2844.915 kb on - strand, within ABZR86_RS12685 at 2844.915 kb on - strand, within ABZR86_RS12685 at 2844.915 kb on - strand, within ABZR86_RS12685 at 2845.001 kb on + strand at 2845.001 kb on + strand at 2845.002 kb on - strand at 2845.002 kb on - strand at 2845.002 kb on - strand at 2845.234 kb on + strand at 2845.265 kb on + strand at 2845.265 kb on + strand at 2845.266 kb on - strand at 2845.266 kb on - strand at 2845.266 kb on - strand at 2845.266 kb on - strand at 2845.266 kb on - strand at 2845.266 kb on - strand at 2845.266 kb on - strand at 2845.266 kb on - strand at 2845.686 kb on - strand at 2845.769 kb on + strand at 2845.769 kb on + strand at 2845.770 kb on - strand at 2845.904 kb on + strand, within ABZR86_RS12690 at 2845.904 kb on + strand, within ABZR86_RS12690 at 2845.905 kb on - strand, within ABZR86_RS12690 at 2845.910 kb on + strand, within ABZR86_RS12690 at 2845.910 kb on + strand, within ABZR86_RS12690 at 2845.910 kb on + strand, within ABZR86_RS12690 at 2845.911 kb on - strand, within ABZR86_RS12690 at 2845.911 kb on - strand, within ABZR86_RS12690 at 2845.911 kb on - strand, within ABZR86_RS12690 at 2845.911 kb on - strand, within ABZR86_RS12690 at 2845.911 kb on - strand, within ABZR86_RS12690 at 2845.911 kb on - strand, within ABZR86_RS12690 at 2845.913 kb on + strand, within ABZR86_RS12690 at 2845.953 kb on - strand, within ABZR86_RS12690 at 2845.953 kb on - strand, within ABZR86_RS12690 at 2845.979 kb on + strand, within ABZR86_RS12690 at 2845.980 kb on - strand, within ABZR86_RS12690 at 2845.980 kb on - strand, within ABZR86_RS12690 at 2845.980 kb on - strand, within ABZR86_RS12690
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.32 mM remove 2,843,471 - ABZR86_RS12680 0.15 -3.5 2,843,599 + ABZR86_RS12680 0.32 -2.4 2,843,599 + ABZR86_RS12680 0.32 -1.5 2,843,599 + ABZR86_RS12680 0.32 -2.7 2,843,599 + ABZR86_RS12680 0.32 -3.3 2,843,599 + ABZR86_RS12680 0.32 -3.1 2,843,600 - ABZR86_RS12680 0.32 -1.1 2,843,600 - ABZR86_RS12680 0.32 -3.0 2,843,600 - ABZR86_RS12680 0.32 -1.6 2,843,600 - ABZR86_RS12680 0.32 -2.7 2,843,644 + ABZR86_RS12680 0.37 -3.4 2,843,645 - ABZR86_RS12680 0.38 -4.1 2,843,796 - ABZR86_RS12680 0.57 -2.2 2,844,134 - -2.1 2,844,302 + ABZR86_RS12685 0.12 -1.7 2,844,302 + ABZR86_RS12685 0.12 -1.3 2,844,303 - ABZR86_RS12685 0.12 -1.3 2,844,303 - ABZR86_RS12685 0.12 -1.0 2,844,303 - ABZR86_RS12685 0.12 -2.0 2,844,335 + ABZR86_RS12685 0.16 -1.9 2,844,711 + ABZR86_RS12685 0.58 -1.5 2,844,719 + ABZR86_RS12685 0.59 -3.0 2,844,720 - ABZR86_RS12685 0.59 -3.0 2,844,914 + ABZR86_RS12685 0.80 -2.5 2,844,914 + ABZR86_RS12685 0.80 -1.7 2,844,915 - ABZR86_RS12685 0.80 -2.6 2,844,915 - ABZR86_RS12685 0.80 -3.1 2,844,915 - ABZR86_RS12685 0.80 -2.3 2,845,001 + -3.2 2,845,001 + -1.1 2,845,002 - -2.5 2,845,002 - -3.3 2,845,002 - -2.1 2,845,234 + -0.0 2,845,265 + +0.3 2,845,265 + +0.4 2,845,266 - -0.3 2,845,266 - -0.3 2,845,266 - +0.3 2,845,266 - -0.4 2,845,266 - -0.2 2,845,266 - -0.1 2,845,266 - +1.6 2,845,266 - -0.4 2,845,686 - -0.5 2,845,769 + -2.0 2,845,769 + +0.2 2,845,770 - +0.2 2,845,904 + ABZR86_RS12690 0.10 +0.5 2,845,904 + ABZR86_RS12690 0.10 +0.4 2,845,905 - ABZR86_RS12690 0.10 +0.1 2,845,910 + ABZR86_RS12690 0.10 -0.7 2,845,910 + ABZR86_RS12690 0.10 +0.3 2,845,910 + ABZR86_RS12690 0.10 +0.3 2,845,911 - ABZR86_RS12690 0.10 +0.7 2,845,911 - ABZR86_RS12690 0.10 +0.4 2,845,911 - ABZR86_RS12690 0.10 +0.2 2,845,911 - ABZR86_RS12690 0.10 -0.4 2,845,911 - ABZR86_RS12690 0.10 +0.3 2,845,911 - ABZR86_RS12690 0.10 +0.2 2,845,913 + ABZR86_RS12690 0.10 +0.2 2,845,953 - ABZR86_RS12690 0.12 +0.3 2,845,953 - ABZR86_RS12690 0.12 -2.3 2,845,979 + ABZR86_RS12690 0.13 +0.6 2,845,980 - ABZR86_RS12690 0.13 +0.3 2,845,980 - ABZR86_RS12690 0.13 +0.4 2,845,980 - ABZR86_RS12690 0.13 +0.6
Or see this region's nucleotide sequence