Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS11530

Experiment: Chlorite 0.32 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS11525 and ABZR86_RS11530 are separated by 84 nucleotidesABZR86_RS11530 and ABZR86_RS11535 are separated by 160 nucleotides ABZR86_RS11525: ABZR86_RS11525 - tRNA dihydrouridine synthase DusB, at 2,572,940 to 2,573,926 _RS11525 ABZR86_RS11530: ABZR86_RS11530 - SGNH/GDSL hydrolase family protein, at 2,574,011 to 2,574,619 _RS11530 ABZR86_RS11535: ABZR86_RS11535 - protease pro-enzyme activation domain-containing protein, at 2,574,780 to 2,576,657 _RS11535 Position (kb) 2574 2575Strain fitness (log2 ratio) -3 -2 -1 0 1at 2573.192 kb on + strand, within ABZR86_RS11525at 2573.192 kb on + strand, within ABZR86_RS11525at 2573.193 kb on - strand, within ABZR86_RS11525at 2573.468 kb on + strand, within ABZR86_RS11525at 2573.468 kb on + strand, within ABZR86_RS11525at 2573.468 kb on + strand, within ABZR86_RS11525at 2573.468 kb on + strand, within ABZR86_RS11525at 2573.468 kb on + strand, within ABZR86_RS11525at 2573.469 kb on - strand, within ABZR86_RS11525at 2573.469 kb on - strand, within ABZR86_RS11525at 2573.469 kb on - strand, within ABZR86_RS11525at 2573.486 kb on + strand, within ABZR86_RS11525at 2573.486 kb on + strand, within ABZR86_RS11525at 2573.738 kb on + strand, within ABZR86_RS11525at 2573.738 kb on + strand, within ABZR86_RS11525at 2573.738 kb on + strand, within ABZR86_RS11525at 2573.738 kb on + strand, within ABZR86_RS11525at 2573.739 kb on - strand, within ABZR86_RS11525at 2573.739 kb on - strand, within ABZR86_RS11525at 2573.739 kb on - strand, within ABZR86_RS11525at 2573.747 kb on + strand, within ABZR86_RS11525at 2573.748 kb on - strand, within ABZR86_RS11525at 2573.748 kb on - strand, within ABZR86_RS11525at 2573.885 kb on + strandat 2573.924 kb on + strandat 2573.924 kb on + strandat 2573.925 kb on - strandat 2574.052 kb on - strandat 2574.094 kb on - strand, within ABZR86_RS11530at 2574.110 kb on - strand, within ABZR86_RS11530at 2574.110 kb on - strand, within ABZR86_RS11530at 2574.381 kb on + strand, within ABZR86_RS11530at 2574.381 kb on + strand, within ABZR86_RS11530at 2574.381 kb on + strand, within ABZR86_RS11530at 2574.382 kb on - strand, within ABZR86_RS11530at 2574.382 kb on - strand, within ABZR86_RS11530at 2574.382 kb on - strand, within ABZR86_RS11530at 2574.382 kb on - strand, within ABZR86_RS11530at 2574.402 kb on + strand, within ABZR86_RS11530at 2574.402 kb on + strand, within ABZR86_RS11530at 2574.402 kb on + strand, within ABZR86_RS11530at 2574.403 kb on - strand, within ABZR86_RS11530at 2574.427 kb on - strand, within ABZR86_RS11530at 2574.450 kb on + strand, within ABZR86_RS11530at 2574.453 kb on + strand, within ABZR86_RS11530at 2574.453 kb on + strand, within ABZR86_RS11530at 2574.453 kb on + strand, within ABZR86_RS11530at 2574.453 kb on + strand, within ABZR86_RS11530at 2574.453 kb on + strand, within ABZR86_RS11530at 2574.454 kb on - strand, within ABZR86_RS11530at 2574.454 kb on - strand, within ABZR86_RS11530at 2574.454 kb on - strand, within ABZR86_RS11530at 2574.454 kb on - strand, within ABZR86_RS11530at 2574.689 kb on + strandat 2574.689 kb on + strandat 2574.767 kb on - strandat 2574.782 kb on - strandat 2574.793 kb on + strandat 2574.806 kb on - strandat 2574.806 kb on - strandat 2574.806 kb on - strandat 2574.806 kb on - strandat 2574.806 kb on - strandat 2574.877 kb on + strandat 2574.877 kb on + strandat 2574.877 kb on + strandat 2574.877 kb on + strandat 2574.877 kb on + strandat 2574.878 kb on - strandat 2574.878 kb on - strandat 2574.878 kb on - strandat 2574.878 kb on - strandat 2574.878 kb on - strandat 2574.883 kb on + strandat 2574.946 kb on + strandat 2574.946 kb on + strandat 2574.947 kb on - strandat 2574.947 kb on - strandat 2574.947 kb on - strandat 2574.947 kb on - strandat 2574.947 kb on - strandat 2575.045 kb on + strand, within ABZR86_RS11535at 2575.045 kb on + strand, within ABZR86_RS11535at 2575.046 kb on - strand, within ABZR86_RS11535at 2575.046 kb on - strand, within ABZR86_RS11535at 2575.046 kb on - strand, within ABZR86_RS11535at 2575.106 kb on + strand, within ABZR86_RS11535at 2575.107 kb on - strand, within ABZR86_RS11535at 2575.139 kb on + strand, within ABZR86_RS11535at 2575.139 kb on + strand, within ABZR86_RS11535at 2575.168 kb on + strand, within ABZR86_RS11535at 2575.168 kb on + strand, within ABZR86_RS11535at 2575.267 kb on + strand, within ABZR86_RS11535at 2575.282 kb on + strand, within ABZR86_RS11535at 2575.282 kb on + strand, within ABZR86_RS11535at 2575.283 kb on - strand, within ABZR86_RS11535at 2575.283 kb on - strand, within ABZR86_RS11535at 2575.288 kb on + strand, within ABZR86_RS11535at 2575.294 kb on + strand, within ABZR86_RS11535at 2575.294 kb on + strand, within ABZR86_RS11535at 2575.294 kb on + strand, within ABZR86_RS11535at 2575.294 kb on + strand, within ABZR86_RS11535at 2575.294 kb on + strand, within ABZR86_RS11535at 2575.294 kb on + strand, within ABZR86_RS11535at 2575.295 kb on - strand, within ABZR86_RS11535at 2575.295 kb on - strand, within ABZR86_RS11535at 2575.393 kb on - strand, within ABZR86_RS11535at 2575.405 kb on + strand, within ABZR86_RS11535at 2575.406 kb on - strand, within ABZR86_RS11535at 2575.438 kb on + strand, within ABZR86_RS11535at 2575.438 kb on + strand, within ABZR86_RS11535at 2575.439 kb on - strand, within ABZR86_RS11535at 2575.439 kb on - strand, within ABZR86_RS11535at 2575.442 kb on + strand, within ABZR86_RS11535at 2575.559 kb on - strand, within ABZR86_RS11535at 2575.559 kb on - strand, within ABZR86_RS11535

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Per-strain Table

Position Strand Gene LocusTag Fraction Chlorite 0.32 mM
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2,573,192 + ABZR86_RS11525 0.26 -0.6
2,573,192 + ABZR86_RS11525 0.26 -0.5
2,573,193 - ABZR86_RS11525 0.26 -0.5
2,573,468 + ABZR86_RS11525 0.53 +0.3
2,573,468 + ABZR86_RS11525 0.53 -0.6
2,573,468 + ABZR86_RS11525 0.53 -0.3
2,573,468 + ABZR86_RS11525 0.53 -0.7
2,573,468 + ABZR86_RS11525 0.53 +0.4
2,573,469 - ABZR86_RS11525 0.54 -1.2
2,573,469 - ABZR86_RS11525 0.54 -0.1
2,573,469 - ABZR86_RS11525 0.54 +0.3
2,573,486 + ABZR86_RS11525 0.55 -0.8
2,573,486 + ABZR86_RS11525 0.55 -0.5
2,573,738 + ABZR86_RS11525 0.81 -1.2
2,573,738 + ABZR86_RS11525 0.81 -0.4
2,573,738 + ABZR86_RS11525 0.81 -0.4
2,573,738 + ABZR86_RS11525 0.81 +0.3
2,573,739 - ABZR86_RS11525 0.81 +0.5
2,573,739 - ABZR86_RS11525 0.81 -0.4
2,573,739 - ABZR86_RS11525 0.81 -0.1
2,573,747 + ABZR86_RS11525 0.82 -0.7
2,573,748 - ABZR86_RS11525 0.82 -0.5
2,573,748 - ABZR86_RS11525 0.82 -2.8
2,573,885 + +0.4
2,573,924 + +0.2
2,573,924 + +0.4
2,573,925 - +0.1
2,574,052 - +0.3
2,574,094 - ABZR86_RS11530 0.14 +0.7
2,574,110 - ABZR86_RS11530 0.16 +0.4
2,574,110 - ABZR86_RS11530 0.16 +0.2
2,574,381 + ABZR86_RS11530 0.61 -0.4
2,574,381 + ABZR86_RS11530 0.61 +0.3
2,574,381 + ABZR86_RS11530 0.61 -0.3
2,574,382 - ABZR86_RS11530 0.61 -0.3
2,574,382 - ABZR86_RS11530 0.61 -0.2
2,574,382 - ABZR86_RS11530 0.61 +0.2
2,574,382 - ABZR86_RS11530 0.61 -0.7
2,574,402 + ABZR86_RS11530 0.64 -0.5
2,574,402 + ABZR86_RS11530 0.64 +0.3
2,574,402 + ABZR86_RS11530 0.64 -1.1
2,574,403 - ABZR86_RS11530 0.64 +1.1
2,574,427 - ABZR86_RS11530 0.68 -0.9
2,574,450 + ABZR86_RS11530 0.72 +0.5
2,574,453 + ABZR86_RS11530 0.73 +0.1
2,574,453 + ABZR86_RS11530 0.73 +0.1
2,574,453 + ABZR86_RS11530 0.73 +0.3
2,574,453 + ABZR86_RS11530 0.73 +1.0
2,574,453 + ABZR86_RS11530 0.73 +0.6
2,574,454 - ABZR86_RS11530 0.73 +0.1
2,574,454 - ABZR86_RS11530 0.73 -0.1
2,574,454 - ABZR86_RS11530 0.73 +0.1
2,574,454 - ABZR86_RS11530 0.73 -0.0
2,574,689 + -0.0
2,574,689 + -0.8
2,574,767 - -0.9
2,574,782 - +0.2
2,574,793 + +0.6
2,574,806 - +0.1
2,574,806 - +0.3
2,574,806 - +0.1
2,574,806 - +0.7
2,574,806 - +0.1
2,574,877 + -0.0
2,574,877 + +1.3
2,574,877 + -0.2
2,574,877 + +0.2
2,574,877 + +0.4
2,574,878 - +0.1
2,574,878 - +0.9
2,574,878 - -0.9
2,574,878 - -0.1
2,574,878 - +0.1
2,574,883 + +0.3
2,574,946 + +0.3
2,574,946 + -0.6
2,574,947 - +0.2
2,574,947 - +0.6
2,574,947 - +0.8
2,574,947 - -0.1
2,574,947 - +0.8
2,575,045 + ABZR86_RS11535 0.14 +0.5
2,575,045 + ABZR86_RS11535 0.14 -0.8
2,575,046 - ABZR86_RS11535 0.14 -0.0
2,575,046 - ABZR86_RS11535 0.14 +0.1
2,575,046 - ABZR86_RS11535 0.14 -0.2
2,575,106 + ABZR86_RS11535 0.17 -0.1
2,575,107 - ABZR86_RS11535 0.17 +0.7
2,575,139 + ABZR86_RS11535 0.19 -0.6
2,575,139 + ABZR86_RS11535 0.19 +0.1
2,575,168 + ABZR86_RS11535 0.21 +0.5
2,575,168 + ABZR86_RS11535 0.21 +0.3
2,575,267 + ABZR86_RS11535 0.26 +0.4
2,575,282 + ABZR86_RS11535 0.27 -0.5
2,575,282 + ABZR86_RS11535 0.27 +0.3
2,575,283 - ABZR86_RS11535 0.27 +0.2
2,575,283 - ABZR86_RS11535 0.27 +0.4
2,575,288 + ABZR86_RS11535 0.27 -2.2
2,575,294 + ABZR86_RS11535 0.27 +0.1
2,575,294 + ABZR86_RS11535 0.27 +1.1
2,575,294 + ABZR86_RS11535 0.27 -0.0
2,575,294 + ABZR86_RS11535 0.27 +0.5
2,575,294 + ABZR86_RS11535 0.27 +0.1
2,575,294 + ABZR86_RS11535 0.27 -0.2
2,575,295 - ABZR86_RS11535 0.27 +1.4
2,575,295 - ABZR86_RS11535 0.27 -0.1
2,575,393 - ABZR86_RS11535 0.33 +1.7
2,575,405 + ABZR86_RS11535 0.33 +0.8
2,575,406 - ABZR86_RS11535 0.33 -0.3
2,575,438 + ABZR86_RS11535 0.35 -0.5
2,575,438 + ABZR86_RS11535 0.35 +0.0
2,575,439 - ABZR86_RS11535 0.35 +0.3
2,575,439 - ABZR86_RS11535 0.35 -0.6
2,575,442 + ABZR86_RS11535 0.35 +0.5
2,575,559 - ABZR86_RS11535 0.41 +0.4
2,575,559 - ABZR86_RS11535 0.41 +0.3

Or see this region's nucleotide sequence