Experiment: Chlorite 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS11520 and ABZR86_RS11525 are separated by 32 nucleotides ABZR86_RS11525 and ABZR86_RS11530 are separated by 84 nucleotides ABZR86_RS11530 and ABZR86_RS11535 are separated by 160 nucleotides
ABZR86_RS11520: ABZR86_RS11520 - TonB-dependent siderophore receptor, at 2,570,691 to 2,572,907
_RS11520
ABZR86_RS11525: ABZR86_RS11525 - tRNA dihydrouridine synthase DusB, at 2,572,940 to 2,573,926
_RS11525
ABZR86_RS11530: ABZR86_RS11530 - SGNH/GDSL hydrolase family protein, at 2,574,011 to 2,574,619
_RS11530
ABZR86_RS11535: ABZR86_RS11535 - protease pro-enzyme activation domain-containing protein, at 2,574,780 to 2,576,657
_RS11535
Position (kb)
2572
2573
2574 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2571.952 kb on - strand, within ABZR86_RS11520 at 2572.086 kb on + strand, within ABZR86_RS11520 at 2572.087 kb on - strand, within ABZR86_RS11520 at 2572.119 kb on + strand, within ABZR86_RS11520 at 2572.120 kb on - strand, within ABZR86_RS11520 at 2572.120 kb on - strand, within ABZR86_RS11520 at 2572.120 kb on - strand, within ABZR86_RS11520 at 2572.120 kb on - strand, within ABZR86_RS11520 at 2572.120 kb on - strand, within ABZR86_RS11520 at 2572.120 kb on - strand, within ABZR86_RS11520 at 2572.120 kb on - strand, within ABZR86_RS11520 at 2572.146 kb on + strand, within ABZR86_RS11520 at 2572.183 kb on - strand, within ABZR86_RS11520 at 2572.183 kb on - strand, within ABZR86_RS11520 at 2572.250 kb on + strand, within ABZR86_RS11520 at 2572.254 kb on + strand, within ABZR86_RS11520 at 2572.254 kb on + strand, within ABZR86_RS11520 at 2572.255 kb on - strand, within ABZR86_RS11520 at 2572.255 kb on - strand, within ABZR86_RS11520 at 2572.491 kb on + strand, within ABZR86_RS11520 at 2572.492 kb on - strand, within ABZR86_RS11520 at 2572.506 kb on + strand, within ABZR86_RS11520 at 2572.507 kb on - strand, within ABZR86_RS11520 at 2572.507 kb on - strand, within ABZR86_RS11520 at 2572.545 kb on + strand, within ABZR86_RS11520 at 2572.677 kb on + strand, within ABZR86_RS11520 at 2572.677 kb on + strand, within ABZR86_RS11520 at 2572.677 kb on + strand, within ABZR86_RS11520 at 2572.678 kb on - strand, within ABZR86_RS11520 at 2572.678 kb on - strand, within ABZR86_RS11520 at 2572.752 kb on + strand at 2572.752 kb on + strand at 2572.822 kb on - strand at 2572.822 kb on - strand at 2572.857 kb on + strand at 2572.857 kb on + strand at 2572.857 kb on + strand at 2572.857 kb on + strand at 2572.858 kb on - strand at 2572.858 kb on - strand at 2572.858 kb on - strand at 2572.858 kb on - strand at 2572.861 kb on + strand at 2572.955 kb on + strand at 2573.192 kb on + strand, within ABZR86_RS11525 at 2573.192 kb on + strand, within ABZR86_RS11525 at 2573.193 kb on - strand, within ABZR86_RS11525 at 2573.468 kb on + strand, within ABZR86_RS11525 at 2573.468 kb on + strand, within ABZR86_RS11525 at 2573.468 kb on + strand, within ABZR86_RS11525 at 2573.468 kb on + strand, within ABZR86_RS11525 at 2573.468 kb on + strand, within ABZR86_RS11525 at 2573.469 kb on - strand, within ABZR86_RS11525 at 2573.469 kb on - strand, within ABZR86_RS11525 at 2573.469 kb on - strand, within ABZR86_RS11525 at 2573.486 kb on + strand, within ABZR86_RS11525 at 2573.486 kb on + strand, within ABZR86_RS11525 at 2573.738 kb on + strand, within ABZR86_RS11525 at 2573.738 kb on + strand, within ABZR86_RS11525 at 2573.738 kb on + strand, within ABZR86_RS11525 at 2573.738 kb on + strand, within ABZR86_RS11525 at 2573.739 kb on - strand, within ABZR86_RS11525 at 2573.739 kb on - strand, within ABZR86_RS11525 at 2573.739 kb on - strand, within ABZR86_RS11525 at 2573.747 kb on + strand, within ABZR86_RS11525 at 2573.748 kb on - strand, within ABZR86_RS11525 at 2573.748 kb on - strand, within ABZR86_RS11525 at 2573.885 kb on + strand at 2573.924 kb on + strand at 2573.924 kb on + strand at 2573.925 kb on - strand at 2574.052 kb on - strand at 2574.094 kb on - strand, within ABZR86_RS11530 at 2574.110 kb on - strand, within ABZR86_RS11530 at 2574.110 kb on - strand, within ABZR86_RS11530 at 2574.381 kb on + strand, within ABZR86_RS11530 at 2574.381 kb on + strand, within ABZR86_RS11530 at 2574.381 kb on + strand, within ABZR86_RS11530 at 2574.382 kb on - strand, within ABZR86_RS11530 at 2574.382 kb on - strand, within ABZR86_RS11530 at 2574.382 kb on - strand, within ABZR86_RS11530 at 2574.382 kb on - strand, within ABZR86_RS11530 at 2574.402 kb on + strand, within ABZR86_RS11530 at 2574.402 kb on + strand, within ABZR86_RS11530 at 2574.402 kb on + strand, within ABZR86_RS11530 at 2574.403 kb on - strand, within ABZR86_RS11530 at 2574.427 kb on - strand, within ABZR86_RS11530 at 2574.450 kb on + strand, within ABZR86_RS11530 at 2574.453 kb on + strand, within ABZR86_RS11530 at 2574.453 kb on + strand, within ABZR86_RS11530 at 2574.453 kb on + strand, within ABZR86_RS11530 at 2574.453 kb on + strand, within ABZR86_RS11530 at 2574.453 kb on + strand, within ABZR86_RS11530 at 2574.454 kb on - strand, within ABZR86_RS11530 at 2574.454 kb on - strand, within ABZR86_RS11530 at 2574.454 kb on - strand, within ABZR86_RS11530 at 2574.454 kb on - strand, within ABZR86_RS11530 at 2574.689 kb on + strand at 2574.689 kb on + strand at 2574.767 kb on - strand at 2574.782 kb on - strand at 2574.793 kb on + strand at 2574.806 kb on - strand at 2574.806 kb on - strand at 2574.806 kb on - strand at 2574.806 kb on - strand at 2574.806 kb on - strand at 2574.877 kb on + strand at 2574.877 kb on + strand at 2574.877 kb on + strand at 2574.877 kb on + strand at 2574.877 kb on + strand at 2574.878 kb on - strand at 2574.878 kb on - strand at 2574.878 kb on - strand at 2574.878 kb on - strand at 2574.878 kb on - strand at 2574.883 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.32 mM remove 2,571,952 - ABZR86_RS11520 0.57 +0.4 2,572,086 + ABZR86_RS11520 0.63 +0.3 2,572,087 - ABZR86_RS11520 0.63 +0.6 2,572,119 + ABZR86_RS11520 0.64 -0.6 2,572,120 - ABZR86_RS11520 0.64 +1.2 2,572,120 - ABZR86_RS11520 0.64 -0.2 2,572,120 - ABZR86_RS11520 0.64 -0.3 2,572,120 - ABZR86_RS11520 0.64 +0.6 2,572,120 - ABZR86_RS11520 0.64 -0.0 2,572,120 - ABZR86_RS11520 0.64 -0.1 2,572,120 - ABZR86_RS11520 0.64 -0.4 2,572,146 + ABZR86_RS11520 0.66 +0.1 2,572,183 - ABZR86_RS11520 0.67 -0.8 2,572,183 - ABZR86_RS11520 0.67 +0.1 2,572,250 + ABZR86_RS11520 0.70 -0.5 2,572,254 + ABZR86_RS11520 0.71 -0.7 2,572,254 + ABZR86_RS11520 0.71 +0.6 2,572,255 - ABZR86_RS11520 0.71 -0.0 2,572,255 - ABZR86_RS11520 0.71 +0.2 2,572,491 + ABZR86_RS11520 0.81 +0.1 2,572,492 - ABZR86_RS11520 0.81 +0.1 2,572,506 + ABZR86_RS11520 0.82 +0.7 2,572,507 - ABZR86_RS11520 0.82 -0.4 2,572,507 - ABZR86_RS11520 0.82 -1.4 2,572,545 + ABZR86_RS11520 0.84 -0.5 2,572,677 + ABZR86_RS11520 0.90 -0.2 2,572,677 + ABZR86_RS11520 0.90 +0.1 2,572,677 + ABZR86_RS11520 0.90 -0.8 2,572,678 - ABZR86_RS11520 0.90 -0.2 2,572,678 - ABZR86_RS11520 0.90 -0.4 2,572,752 + +0.3 2,572,752 + +0.6 2,572,822 - -1.0 2,572,822 - +0.1 2,572,857 + +0.3 2,572,857 + +0.1 2,572,857 + -0.2 2,572,857 + +0.7 2,572,858 - -0.5 2,572,858 - +0.5 2,572,858 - -0.5 2,572,858 - +1.5 2,572,861 + -0.2 2,572,955 + -0.5 2,573,192 + ABZR86_RS11525 0.26 -0.6 2,573,192 + ABZR86_RS11525 0.26 -0.5 2,573,193 - ABZR86_RS11525 0.26 -0.5 2,573,468 + ABZR86_RS11525 0.53 +0.3 2,573,468 + ABZR86_RS11525 0.53 -0.6 2,573,468 + ABZR86_RS11525 0.53 -0.3 2,573,468 + ABZR86_RS11525 0.53 -0.7 2,573,468 + ABZR86_RS11525 0.53 +0.4 2,573,469 - ABZR86_RS11525 0.54 -1.2 2,573,469 - ABZR86_RS11525 0.54 -0.1 2,573,469 - ABZR86_RS11525 0.54 +0.3 2,573,486 + ABZR86_RS11525 0.55 -0.8 2,573,486 + ABZR86_RS11525 0.55 -0.5 2,573,738 + ABZR86_RS11525 0.81 -1.2 2,573,738 + ABZR86_RS11525 0.81 -0.4 2,573,738 + ABZR86_RS11525 0.81 -0.4 2,573,738 + ABZR86_RS11525 0.81 +0.3 2,573,739 - ABZR86_RS11525 0.81 +0.5 2,573,739 - ABZR86_RS11525 0.81 -0.4 2,573,739 - ABZR86_RS11525 0.81 -0.1 2,573,747 + ABZR86_RS11525 0.82 -0.7 2,573,748 - ABZR86_RS11525 0.82 -0.5 2,573,748 - ABZR86_RS11525 0.82 -2.8 2,573,885 + +0.4 2,573,924 + +0.2 2,573,924 + +0.4 2,573,925 - +0.1 2,574,052 - +0.3 2,574,094 - ABZR86_RS11530 0.14 +0.7 2,574,110 - ABZR86_RS11530 0.16 +0.4 2,574,110 - ABZR86_RS11530 0.16 +0.2 2,574,381 + ABZR86_RS11530 0.61 -0.4 2,574,381 + ABZR86_RS11530 0.61 +0.3 2,574,381 + ABZR86_RS11530 0.61 -0.3 2,574,382 - ABZR86_RS11530 0.61 -0.3 2,574,382 - ABZR86_RS11530 0.61 -0.2 2,574,382 - ABZR86_RS11530 0.61 +0.2 2,574,382 - ABZR86_RS11530 0.61 -0.7 2,574,402 + ABZR86_RS11530 0.64 -0.5 2,574,402 + ABZR86_RS11530 0.64 +0.3 2,574,402 + ABZR86_RS11530 0.64 -1.1 2,574,403 - ABZR86_RS11530 0.64 +1.1 2,574,427 - ABZR86_RS11530 0.68 -0.9 2,574,450 + ABZR86_RS11530 0.72 +0.5 2,574,453 + ABZR86_RS11530 0.73 +0.1 2,574,453 + ABZR86_RS11530 0.73 +0.1 2,574,453 + ABZR86_RS11530 0.73 +0.3 2,574,453 + ABZR86_RS11530 0.73 +1.0 2,574,453 + ABZR86_RS11530 0.73 +0.6 2,574,454 - ABZR86_RS11530 0.73 +0.1 2,574,454 - ABZR86_RS11530 0.73 -0.1 2,574,454 - ABZR86_RS11530 0.73 +0.1 2,574,454 - ABZR86_RS11530 0.73 -0.0 2,574,689 + -0.0 2,574,689 + -0.8 2,574,767 - -0.9 2,574,782 - +0.2 2,574,793 + +0.6 2,574,806 - +0.1 2,574,806 - +0.3 2,574,806 - +0.1 2,574,806 - +0.7 2,574,806 - +0.1 2,574,877 + -0.0 2,574,877 + +1.3 2,574,877 + -0.2 2,574,877 + +0.2 2,574,877 + +0.4 2,574,878 - +0.1 2,574,878 - +0.9 2,574,878 - -0.9 2,574,878 - -0.1 2,574,878 - +0.1 2,574,883 + +0.3
Or see this region's nucleotide sequence