Experiment: Chlorite 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS09540 and ABZR86_RS09545 are separated by 162 nucleotides ABZR86_RS09545 and ABZR86_RS09550 are separated by 30 nucleotides
ABZR86_RS09540: ABZR86_RS09540 - tRNA guanosine(34) transglycosylase Tgt, at 2,125,393 to 2,126,508
_RS09540
ABZR86_RS09545: ABZR86_RS09545 - tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA, at 2,126,671 to 2,127,756
_RS09545
ABZR86_RS09550: ABZR86_RS09550 - hypothetical protein, at 2,127,787 to 2,130,213
_RS09550
Position (kb)
2126
2127
2128 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2126.140 kb on + strand, within ABZR86_RS09540 at 2126.140 kb on + strand, within ABZR86_RS09540 at 2126.140 kb on + strand, within ABZR86_RS09540 at 2126.140 kb on + strand, within ABZR86_RS09540 at 2126.141 kb on - strand, within ABZR86_RS09540 at 2126.315 kb on + strand, within ABZR86_RS09540 at 2126.315 kb on + strand, within ABZR86_RS09540 at 2126.396 kb on + strand, within ABZR86_RS09540 at 2126.396 kb on + strand, within ABZR86_RS09540 at 2126.396 kb on + strand, within ABZR86_RS09540 at 2126.397 kb on - strand at 2126.397 kb on - strand at 2126.397 kb on - strand at 2126.397 kb on - strand at 2126.517 kb on + strand at 2126.705 kb on + strand at 2126.853 kb on - strand, within ABZR86_RS09545 at 2127.101 kb on + strand, within ABZR86_RS09545 at 2127.251 kb on + strand, within ABZR86_RS09545 at 2127.251 kb on + strand, within ABZR86_RS09545 at 2127.252 kb on - strand, within ABZR86_RS09545 at 2127.252 kb on - strand, within ABZR86_RS09545 at 2127.252 kb on - strand, within ABZR86_RS09545 at 2127.603 kb on + strand, within ABZR86_RS09545 at 2127.603 kb on + strand, within ABZR86_RS09545 at 2127.603 kb on + strand, within ABZR86_RS09545 at 2127.788 kb on + strand at 2127.789 kb on - strand at 2127.828 kb on + strand at 2127.882 kb on + strand at 2127.882 kb on + strand at 2127.883 kb on - strand at 2127.883 kb on - strand at 2127.914 kb on + strand at 2127.914 kb on + strand at 2127.914 kb on + strand at 2127.914 kb on + strand at 2127.914 kb on + strand at 2127.914 kb on + strand at 2127.915 kb on - strand at 2127.915 kb on - strand at 2127.915 kb on - strand at 2127.915 kb on - strand at 2127.915 kb on - strand at 2127.915 kb on - strand at 2127.915 kb on - strand at 2127.995 kb on + strand at 2127.996 kb on - strand at 2127.996 kb on - strand at 2127.996 kb on - strand at 2128.013 kb on + strand at 2128.014 kb on - strand at 2128.014 kb on - strand at 2128.014 kb on - strand at 2128.022 kb on + strand at 2128.023 kb on - strand at 2128.023 kb on - strand at 2128.088 kb on + strand, within ABZR86_RS09550 at 2128.088 kb on + strand, within ABZR86_RS09550 at 2128.089 kb on - strand, within ABZR86_RS09550 at 2128.202 kb on + strand, within ABZR86_RS09550 at 2128.340 kb on + strand, within ABZR86_RS09550 at 2128.340 kb on + strand, within ABZR86_RS09550 at 2128.341 kb on - strand, within ABZR86_RS09550 at 2128.341 kb on - strand, within ABZR86_RS09550 at 2128.341 kb on - strand, within ABZR86_RS09550 at 2128.341 kb on - strand, within ABZR86_RS09550 at 2128.406 kb on + strand, within ABZR86_RS09550 at 2128.406 kb on + strand, within ABZR86_RS09550 at 2128.407 kb on - strand, within ABZR86_RS09550 at 2128.407 kb on - strand, within ABZR86_RS09550 at 2128.532 kb on + strand, within ABZR86_RS09550 at 2128.532 kb on + strand, within ABZR86_RS09550 at 2128.532 kb on + strand, within ABZR86_RS09550 at 2128.532 kb on + strand, within ABZR86_RS09550 at 2128.532 kb on + strand, within ABZR86_RS09550 at 2128.533 kb on - strand, within ABZR86_RS09550 at 2128.623 kb on - strand, within ABZR86_RS09550 at 2128.625 kb on + strand, within ABZR86_RS09550 at 2128.626 kb on - strand, within ABZR86_RS09550 at 2128.626 kb on - strand, within ABZR86_RS09550 at 2128.736 kb on + strand, within ABZR86_RS09550 at 2128.737 kb on - strand, within ABZR86_RS09550
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.32 mM remove 2,126,140 + ABZR86_RS09540 0.67 -1.8 2,126,140 + ABZR86_RS09540 0.67 -1.9 2,126,140 + ABZR86_RS09540 0.67 -1.4 2,126,140 + ABZR86_RS09540 0.67 +0.3 2,126,141 - ABZR86_RS09540 0.67 -3.5 2,126,315 + ABZR86_RS09540 0.83 -2.6 2,126,315 + ABZR86_RS09540 0.83 -3.2 2,126,396 + ABZR86_RS09540 0.90 -0.0 2,126,396 + ABZR86_RS09540 0.90 -1.9 2,126,396 + ABZR86_RS09540 0.90 -2.0 2,126,397 - -1.4 2,126,397 - -0.7 2,126,397 - -0.9 2,126,397 - -1.7 2,126,517 + -0.3 2,126,705 + -0.8 2,126,853 - ABZR86_RS09545 0.17 -2.2 2,127,101 + ABZR86_RS09545 0.40 -1.9 2,127,251 + ABZR86_RS09545 0.53 -1.3 2,127,251 + ABZR86_RS09545 0.53 -0.5 2,127,252 - ABZR86_RS09545 0.53 -1.5 2,127,252 - ABZR86_RS09545 0.53 -0.1 2,127,252 - ABZR86_RS09545 0.53 -2.1 2,127,603 + ABZR86_RS09545 0.86 -1.0 2,127,603 + ABZR86_RS09545 0.86 -2.3 2,127,603 + ABZR86_RS09545 0.86 -1.1 2,127,788 + -0.6 2,127,789 - +0.2 2,127,828 + -0.4 2,127,882 + +0.2 2,127,882 + -0.8 2,127,883 - +0.8 2,127,883 - +0.0 2,127,914 + +0.1 2,127,914 + +0.3 2,127,914 + +0.3 2,127,914 + +0.2 2,127,914 + -0.1 2,127,914 + +0.1 2,127,915 - +0.5 2,127,915 - +0.1 2,127,915 - -0.2 2,127,915 - +0.3 2,127,915 - -0.0 2,127,915 - +1.4 2,127,915 - +0.0 2,127,995 + -0.1 2,127,996 - -0.1 2,127,996 - +0.1 2,127,996 - -0.0 2,128,013 + -0.2 2,128,014 - -0.7 2,128,014 - -1.7 2,128,014 - +0.1 2,128,022 + -0.2 2,128,023 - -0.9 2,128,023 - -0.3 2,128,088 + ABZR86_RS09550 0.12 +0.2 2,128,088 + ABZR86_RS09550 0.12 +0.4 2,128,089 - ABZR86_RS09550 0.12 -0.3 2,128,202 + ABZR86_RS09550 0.17 +0.1 2,128,340 + ABZR86_RS09550 0.23 -0.5 2,128,340 + ABZR86_RS09550 0.23 +0.1 2,128,341 - ABZR86_RS09550 0.23 +0.4 2,128,341 - ABZR86_RS09550 0.23 -0.4 2,128,341 - ABZR86_RS09550 0.23 -0.3 2,128,341 - ABZR86_RS09550 0.23 +1.3 2,128,406 + ABZR86_RS09550 0.26 +0.4 2,128,406 + ABZR86_RS09550 0.26 +0.6 2,128,407 - ABZR86_RS09550 0.26 -1.0 2,128,407 - ABZR86_RS09550 0.26 +0.4 2,128,532 + ABZR86_RS09550 0.31 -0.4 2,128,532 + ABZR86_RS09550 0.31 +0.1 2,128,532 + ABZR86_RS09550 0.31 -0.1 2,128,532 + ABZR86_RS09550 0.31 -0.0 2,128,532 + ABZR86_RS09550 0.31 -0.3 2,128,533 - ABZR86_RS09550 0.31 -0.7 2,128,623 - ABZR86_RS09550 0.34 -0.2 2,128,625 + ABZR86_RS09550 0.35 -0.2 2,128,626 - ABZR86_RS09550 0.35 +0.6 2,128,626 - ABZR86_RS09550 0.35 -1.9 2,128,736 + ABZR86_RS09550 0.39 +0.0 2,128,737 - ABZR86_RS09550 0.39 +0.7
Or see this region's nucleotide sequence