Experiment: Chlorite 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS09075 and ABZR86_RS09080 are separated by 5 nucleotides ABZR86_RS09080 and ABZR86_RS09085 are separated by 139 nucleotides ABZR86_RS09085 and ABZR86_RS09090 are separated by 163 nucleotides ABZR86_RS09090 and ABZR86_RS09095 are separated by 88 nucleotides
ABZR86_RS09075: ABZR86_RS09075 - NrsF family protein, at 2,017,827 to 2,018,480
_RS09075
ABZR86_RS09080: ABZR86_RS09080 - sigma-70 family RNA polymerase sigma factor, at 2,018,486 to 2,019,142
_RS09080
ABZR86_RS09085: ABZR86_RS09085 - cytochrome c biogenesis protein DipZ, at 2,019,282 to 2,021,003
_RS09085
ABZR86_RS09090: ABZR86_RS09090 - peptide-methionine (R)-S-oxide reductase MsrB, at 2,021,167 to 2,021,859
_RS09090
ABZR86_RS09095: ABZR86_RS09095 - nicotinate-nucleotide adenylyltransferase, at 2,021,948 to 2,022,583
_RS09095
Position (kb)
2019
2020
2021
2022 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2018.336 kb on - strand, within ABZR86_RS09075 at 2018.503 kb on + strand at 2018.829 kb on + strand, within ABZR86_RS09080 at 2018.847 kb on + strand, within ABZR86_RS09080 at 2018.847 kb on + strand, within ABZR86_RS09080 at 2018.847 kb on + strand, within ABZR86_RS09080 at 2018.847 kb on + strand, within ABZR86_RS09080 at 2018.847 kb on + strand, within ABZR86_RS09080 at 2018.847 kb on + strand, within ABZR86_RS09080 at 2018.848 kb on - strand, within ABZR86_RS09080 at 2018.848 kb on - strand, within ABZR86_RS09080 at 2018.848 kb on - strand, within ABZR86_RS09080 at 2018.848 kb on - strand, within ABZR86_RS09080 at 2018.851 kb on + strand, within ABZR86_RS09080 at 2018.851 kb on + strand, within ABZR86_RS09080 at 2018.851 kb on + strand, within ABZR86_RS09080 at 2018.851 kb on + strand, within ABZR86_RS09080 at 2018.851 kb on + strand, within ABZR86_RS09080 at 2018.851 kb on + strand, within ABZR86_RS09080 at 2018.851 kb on + strand, within ABZR86_RS09080 at 2018.852 kb on - strand, within ABZR86_RS09080 at 2018.852 kb on - strand, within ABZR86_RS09080 at 2018.852 kb on - strand, within ABZR86_RS09080 at 2018.852 kb on - strand, within ABZR86_RS09080 at 2018.852 kb on - strand, within ABZR86_RS09080 at 2018.977 kb on - strand, within ABZR86_RS09080 at 2019.096 kb on - strand at 2019.096 kb on - strand at 2019.104 kb on + strand at 2019.225 kb on + strand at 2019.225 kb on + strand at 2019.225 kb on + strand at 2019.226 kb on - strand at 2019.226 kb on - strand at 2019.250 kb on + strand at 2019.251 kb on - strand at 2019.289 kb on + strand at 2019.290 kb on - strand at 2019.303 kb on + strand at 2019.303 kb on + strand at 2019.304 kb on - strand at 2019.304 kb on - strand at 2019.304 kb on - strand at 2019.490 kb on - strand, within ABZR86_RS09085 at 2019.490 kb on - strand, within ABZR86_RS09085 at 2019.765 kb on + strand, within ABZR86_RS09085 at 2019.765 kb on + strand, within ABZR86_RS09085 at 2019.765 kb on + strand, within ABZR86_RS09085 at 2019.766 kb on - strand, within ABZR86_RS09085 at 2020.152 kb on + strand, within ABZR86_RS09085 at 2020.152 kb on + strand, within ABZR86_RS09085 at 2020.153 kb on - strand, within ABZR86_RS09085 at 2020.153 kb on - strand, within ABZR86_RS09085 at 2020.153 kb on - strand, within ABZR86_RS09085 at 2020.153 kb on - strand, within ABZR86_RS09085 at 2020.153 kb on - strand, within ABZR86_RS09085 at 2020.153 kb on - strand, within ABZR86_RS09085 at 2020.185 kb on + strand, within ABZR86_RS09085 at 2020.185 kb on + strand, within ABZR86_RS09085 at 2020.186 kb on - strand, within ABZR86_RS09085 at 2020.209 kb on + strand, within ABZR86_RS09085 at 2020.209 kb on + strand, within ABZR86_RS09085 at 2020.209 kb on + strand, within ABZR86_RS09085 at 2020.209 kb on + strand, within ABZR86_RS09085 at 2020.210 kb on - strand, within ABZR86_RS09085 at 2020.210 kb on - strand, within ABZR86_RS09085 at 2020.210 kb on - strand, within ABZR86_RS09085 at 2020.210 kb on - strand, within ABZR86_RS09085 at 2020.210 kb on - strand, within ABZR86_RS09085 at 2020.210 kb on - strand, within ABZR86_RS09085 at 2020.231 kb on + strand, within ABZR86_RS09085 at 2020.314 kb on + strand, within ABZR86_RS09085 at 2020.314 kb on + strand, within ABZR86_RS09085 at 2020.339 kb on - strand, within ABZR86_RS09085 at 2020.383 kb on + strand, within ABZR86_RS09085 at 2020.383 kb on + strand, within ABZR86_RS09085 at 2020.383 kb on + strand, within ABZR86_RS09085 at 2020.384 kb on - strand, within ABZR86_RS09085 at 2020.576 kb on - strand, within ABZR86_RS09085 at 2020.642 kb on - strand, within ABZR86_RS09085 at 2020.642 kb on - strand, within ABZR86_RS09085 at 2021.057 kb on - strand at 2021.057 kb on - strand at 2021.090 kb on + strand at 2021.189 kb on + strand at 2021.222 kb on + strand at 2021.223 kb on - strand at 2021.223 kb on - strand at 2021.223 kb on - strand at 2021.223 kb on - strand at 2021.310 kb on - strand, within ABZR86_RS09090 at 2021.331 kb on + strand, within ABZR86_RS09090 at 2021.331 kb on + strand, within ABZR86_RS09090 at 2021.331 kb on + strand, within ABZR86_RS09090 at 2021.342 kb on + strand, within ABZR86_RS09090 at 2021.370 kb on + strand, within ABZR86_RS09090 at 2021.474 kb on + strand, within ABZR86_RS09090 at 2021.566 kb on + strand, within ABZR86_RS09090 at 2021.713 kb on + strand, within ABZR86_RS09090 at 2021.713 kb on + strand, within ABZR86_RS09090 at 2021.714 kb on - strand, within ABZR86_RS09090 at 2021.813 kb on - strand at 2021.870 kb on - strand at 2021.870 kb on - strand at 2021.949 kb on + strand at 2021.949 kb on + strand at 2021.950 kb on - strand at 2021.950 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.32 mM remove 2,018,336 - ABZR86_RS09075 0.78 -2.0 2,018,503 + -0.8 2,018,829 + ABZR86_RS09080 0.52 -0.5 2,018,847 + ABZR86_RS09080 0.55 -0.7 2,018,847 + ABZR86_RS09080 0.55 -0.5 2,018,847 + ABZR86_RS09080 0.55 +0.8 2,018,847 + ABZR86_RS09080 0.55 -1.1 2,018,847 + ABZR86_RS09080 0.55 -0.5 2,018,847 + ABZR86_RS09080 0.55 -1.1 2,018,848 - ABZR86_RS09080 0.55 -2.4 2,018,848 - ABZR86_RS09080 0.55 -3.0 2,018,848 - ABZR86_RS09080 0.55 -1.6 2,018,848 - ABZR86_RS09080 0.55 -2.9 2,018,851 + ABZR86_RS09080 0.56 -0.0 2,018,851 + ABZR86_RS09080 0.56 -1.2 2,018,851 + ABZR86_RS09080 0.56 -1.9 2,018,851 + ABZR86_RS09080 0.56 -0.2 2,018,851 + ABZR86_RS09080 0.56 -0.4 2,018,851 + ABZR86_RS09080 0.56 -0.3 2,018,851 + ABZR86_RS09080 0.56 -1.2 2,018,852 - ABZR86_RS09080 0.56 -2.1 2,018,852 - ABZR86_RS09080 0.56 -1.7 2,018,852 - ABZR86_RS09080 0.56 -2.6 2,018,852 - ABZR86_RS09080 0.56 -3.1 2,018,852 - ABZR86_RS09080 0.56 -4.5 2,018,977 - ABZR86_RS09080 0.75 -1.5 2,019,096 - -0.0 2,019,096 - -1.6 2,019,104 + +0.9 2,019,225 + -1.0 2,019,225 + +0.8 2,019,225 + -0.4 2,019,226 - +0.8 2,019,226 - +0.7 2,019,250 + -0.3 2,019,251 - +0.6 2,019,289 + -1.3 2,019,290 - +0.4 2,019,303 + -1.1 2,019,303 + -1.3 2,019,304 - -0.6 2,019,304 - +0.3 2,019,304 - +0.8 2,019,490 - ABZR86_RS09085 0.12 -0.9 2,019,490 - ABZR86_RS09085 0.12 +0.6 2,019,765 + ABZR86_RS09085 0.28 -0.9 2,019,765 + ABZR86_RS09085 0.28 -1.6 2,019,765 + ABZR86_RS09085 0.28 -2.8 2,019,766 - ABZR86_RS09085 0.28 -0.8 2,020,152 + ABZR86_RS09085 0.51 +0.6 2,020,152 + ABZR86_RS09085 0.51 -0.5 2,020,153 - ABZR86_RS09085 0.51 -1.0 2,020,153 - ABZR86_RS09085 0.51 -1.2 2,020,153 - ABZR86_RS09085 0.51 +0.0 2,020,153 - ABZR86_RS09085 0.51 -0.6 2,020,153 - ABZR86_RS09085 0.51 -0.5 2,020,153 - ABZR86_RS09085 0.51 -0.5 2,020,185 + ABZR86_RS09085 0.52 -0.6 2,020,185 + ABZR86_RS09085 0.52 -0.3 2,020,186 - ABZR86_RS09085 0.52 -0.5 2,020,209 + ABZR86_RS09085 0.54 +0.2 2,020,209 + ABZR86_RS09085 0.54 -0.5 2,020,209 + ABZR86_RS09085 0.54 -0.6 2,020,209 + ABZR86_RS09085 0.54 -0.7 2,020,210 - ABZR86_RS09085 0.54 -2.3 2,020,210 - ABZR86_RS09085 0.54 -0.2 2,020,210 - ABZR86_RS09085 0.54 -0.6 2,020,210 - ABZR86_RS09085 0.54 -2.2 2,020,210 - ABZR86_RS09085 0.54 -1.4 2,020,210 - ABZR86_RS09085 0.54 -1.8 2,020,231 + ABZR86_RS09085 0.55 -0.5 2,020,314 + ABZR86_RS09085 0.60 -1.2 2,020,314 + ABZR86_RS09085 0.60 -1.7 2,020,339 - ABZR86_RS09085 0.61 -1.6 2,020,383 + ABZR86_RS09085 0.64 -1.5 2,020,383 + ABZR86_RS09085 0.64 -0.9 2,020,383 + ABZR86_RS09085 0.64 -1.1 2,020,384 - ABZR86_RS09085 0.64 -1.7 2,020,576 - ABZR86_RS09085 0.75 -1.6 2,020,642 - ABZR86_RS09085 0.79 -1.6 2,020,642 - ABZR86_RS09085 0.79 -0.5 2,021,057 - -0.1 2,021,057 - +0.0 2,021,090 + -0.3 2,021,189 + -0.7 2,021,222 + +0.2 2,021,223 - +0.0 2,021,223 - +0.5 2,021,223 - +0.4 2,021,223 - -0.8 2,021,310 - ABZR86_RS09090 0.21 -0.6 2,021,331 + ABZR86_RS09090 0.24 -1.6 2,021,331 + ABZR86_RS09090 0.24 -0.1 2,021,331 + ABZR86_RS09090 0.24 -0.2 2,021,342 + ABZR86_RS09090 0.25 +0.8 2,021,370 + ABZR86_RS09090 0.29 +0.1 2,021,474 + ABZR86_RS09090 0.44 +0.9 2,021,566 + ABZR86_RS09090 0.58 +0.2 2,021,713 + ABZR86_RS09090 0.79 +0.2 2,021,713 + ABZR86_RS09090 0.79 +1.0 2,021,714 - ABZR86_RS09090 0.79 -0.2 2,021,813 - -1.0 2,021,870 - -0.5 2,021,870 - +1.0 2,021,949 + +0.1 2,021,949 + -0.4 2,021,950 - -0.2 2,021,950 - +0.6
Or see this region's nucleotide sequence