Experiment: Chlorite 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS06375 and ABZR86_RS06380 are separated by 68 nucleotides ABZR86_RS06380 and ABZR86_RS06385 overlap by 4 nucleotides ABZR86_RS06385 and ABZR86_RS06390 overlap by 14 nucleotides
ABZR86_RS06375: ABZR86_RS06375 - TatD family hydrolase, at 1,418,633 to 1,419,400
_RS06375
ABZR86_RS06380: ABZR86_RS06380 - MarR family transcriptional regulator, at 1,419,469 to 1,419,996
_RS06380
ABZR86_RS06385: ABZR86_RS06385 - efflux transporter outer membrane subunit, at 1,419,993 to 1,421,501
_RS06385
ABZR86_RS06390: ABZR86_RS06390 - HlyD family efflux transporter periplasmic adaptor subunit, at 1,421,488 to 1,422,690
_RS06390
Position (kb)
1419
1420
1421
1422 Strain fitness (log2 ratio)
-2
-1
0
1 at 1419.057 kb on + strand, within ABZR86_RS06375 at 1419.057 kb on + strand, within ABZR86_RS06375 at 1419.171 kb on - strand, within ABZR86_RS06375 at 1419.171 kb on - strand, within ABZR86_RS06375 at 1419.221 kb on + strand, within ABZR86_RS06375 at 1419.222 kb on - strand, within ABZR86_RS06375 at 1419.350 kb on - strand at 1419.436 kb on + strand at 1419.436 kb on + strand at 1419.436 kb on + strand at 1419.439 kb on + strand at 1419.439 kb on + strand at 1419.440 kb on - strand at 1419.455 kb on + strand at 1419.670 kb on + strand, within ABZR86_RS06380 at 1419.670 kb on + strand, within ABZR86_RS06380 at 1419.671 kb on - strand, within ABZR86_RS06380 at 1419.671 kb on - strand, within ABZR86_RS06380 at 1419.671 kb on - strand, within ABZR86_RS06380 at 1419.738 kb on + strand, within ABZR86_RS06380 at 1419.738 kb on + strand, within ABZR86_RS06380 at 1419.738 kb on + strand, within ABZR86_RS06380 at 1419.738 kb on + strand, within ABZR86_RS06380 at 1419.739 kb on - strand, within ABZR86_RS06380 at 1420.333 kb on + strand, within ABZR86_RS06385 at 1420.333 kb on + strand, within ABZR86_RS06385 at 1420.334 kb on - strand, within ABZR86_RS06385 at 1420.334 kb on - strand, within ABZR86_RS06385 at 1420.334 kb on - strand, within ABZR86_RS06385 at 1420.396 kb on - strand, within ABZR86_RS06385 at 1420.396 kb on - strand, within ABZR86_RS06385 at 1420.396 kb on - strand, within ABZR86_RS06385 at 1420.428 kb on + strand, within ABZR86_RS06385 at 1420.547 kb on + strand, within ABZR86_RS06385 at 1420.551 kb on + strand, within ABZR86_RS06385 at 1420.551 kb on + strand, within ABZR86_RS06385 at 1420.552 kb on - strand, within ABZR86_RS06385 at 1420.552 kb on - strand, within ABZR86_RS06385 at 1420.552 kb on - strand, within ABZR86_RS06385 at 1420.552 kb on - strand, within ABZR86_RS06385 at 1420.552 kb on - strand, within ABZR86_RS06385 at 1420.552 kb on - strand, within ABZR86_RS06385 at 1420.552 kb on - strand, within ABZR86_RS06385 at 1420.552 kb on - strand, within ABZR86_RS06385 at 1420.620 kb on + strand, within ABZR86_RS06385 at 1420.620 kb on + strand, within ABZR86_RS06385 at 1420.621 kb on - strand, within ABZR86_RS06385 at 1420.645 kb on + strand, within ABZR86_RS06385 at 1421.130 kb on + strand, within ABZR86_RS06385 at 1421.130 kb on + strand, within ABZR86_RS06385 at 1421.130 kb on + strand, within ABZR86_RS06385 at 1421.131 kb on - strand, within ABZR86_RS06385 at 1421.131 kb on - strand, within ABZR86_RS06385 at 1421.407 kb on - strand at 1421.668 kb on + strand, within ABZR86_RS06390 at 1421.669 kb on - strand, within ABZR86_RS06390 at 1421.669 kb on - strand, within ABZR86_RS06390 at 1421.669 kb on - strand, within ABZR86_RS06390 at 1421.669 kb on - strand, within ABZR86_RS06390 at 1421.669 kb on - strand, within ABZR86_RS06390 at 1421.669 kb on - strand, within ABZR86_RS06390 at 1421.669 kb on - strand, within ABZR86_RS06390 at 1422.175 kb on + strand, within ABZR86_RS06390 at 1422.176 kb on - strand, within ABZR86_RS06390 at 1422.337 kb on + strand, within ABZR86_RS06390 at 1422.338 kb on - strand, within ABZR86_RS06390 at 1422.338 kb on - strand, within ABZR86_RS06390 at 1422.338 kb on - strand, within ABZR86_RS06390 at 1422.355 kb on + strand, within ABZR86_RS06390 at 1422.356 kb on - strand, within ABZR86_RS06390
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.32 mM remove 1,419,057 + ABZR86_RS06375 0.55 -0.8 1,419,057 + ABZR86_RS06375 0.55 -2.4 1,419,171 - ABZR86_RS06375 0.70 -1.0 1,419,171 - ABZR86_RS06375 0.70 -0.3 1,419,221 + ABZR86_RS06375 0.77 +0.1 1,419,222 - ABZR86_RS06375 0.77 -0.7 1,419,350 - -0.8 1,419,436 + -0.0 1,419,436 + -1.2 1,419,436 + -0.4 1,419,439 + -1.2 1,419,439 + -0.6 1,419,440 - -0.1 1,419,455 + -1.9 1,419,670 + ABZR86_RS06380 0.38 -0.0 1,419,670 + ABZR86_RS06380 0.38 +0.3 1,419,671 - ABZR86_RS06380 0.38 +0.8 1,419,671 - ABZR86_RS06380 0.38 +1.7 1,419,671 - ABZR86_RS06380 0.38 +0.7 1,419,738 + ABZR86_RS06380 0.51 -0.2 1,419,738 + ABZR86_RS06380 0.51 -0.7 1,419,738 + ABZR86_RS06380 0.51 +0.1 1,419,738 + ABZR86_RS06380 0.51 -1.5 1,419,739 - ABZR86_RS06380 0.51 +0.7 1,420,333 + ABZR86_RS06385 0.23 -0.3 1,420,333 + ABZR86_RS06385 0.23 +0.3 1,420,334 - ABZR86_RS06385 0.23 -0.2 1,420,334 - ABZR86_RS06385 0.23 +0.9 1,420,334 - ABZR86_RS06385 0.23 -0.0 1,420,396 - ABZR86_RS06385 0.27 +0.4 1,420,396 - ABZR86_RS06385 0.27 +1.1 1,420,396 - ABZR86_RS06385 0.27 +0.4 1,420,428 + ABZR86_RS06385 0.29 -0.6 1,420,547 + ABZR86_RS06385 0.37 -0.2 1,420,551 + ABZR86_RS06385 0.37 +0.8 1,420,551 + ABZR86_RS06385 0.37 +0.5 1,420,552 - ABZR86_RS06385 0.37 +0.5 1,420,552 - ABZR86_RS06385 0.37 +1.3 1,420,552 - ABZR86_RS06385 0.37 +0.2 1,420,552 - ABZR86_RS06385 0.37 +0.1 1,420,552 - ABZR86_RS06385 0.37 -0.6 1,420,552 - ABZR86_RS06385 0.37 -0.9 1,420,552 - ABZR86_RS06385 0.37 -0.1 1,420,552 - ABZR86_RS06385 0.37 +0.3 1,420,620 + ABZR86_RS06385 0.42 -0.4 1,420,620 + ABZR86_RS06385 0.42 +0.1 1,420,621 - ABZR86_RS06385 0.42 +0.8 1,420,645 + ABZR86_RS06385 0.43 +0.6 1,421,130 + ABZR86_RS06385 0.75 -0.2 1,421,130 + ABZR86_RS06385 0.75 +1.0 1,421,130 + ABZR86_RS06385 0.75 +0.4 1,421,131 - ABZR86_RS06385 0.75 -1.6 1,421,131 - ABZR86_RS06385 0.75 +0.8 1,421,407 - -0.2 1,421,668 + ABZR86_RS06390 0.15 +0.4 1,421,669 - ABZR86_RS06390 0.15 +0.6 1,421,669 - ABZR86_RS06390 0.15 -0.1 1,421,669 - ABZR86_RS06390 0.15 +0.2 1,421,669 - ABZR86_RS06390 0.15 +0.4 1,421,669 - ABZR86_RS06390 0.15 +0.1 1,421,669 - ABZR86_RS06390 0.15 -0.3 1,421,669 - ABZR86_RS06390 0.15 -0.2 1,422,175 + ABZR86_RS06390 0.57 +1.1 1,422,176 - ABZR86_RS06390 0.57 +0.3 1,422,337 + ABZR86_RS06390 0.71 +0.6 1,422,338 - ABZR86_RS06390 0.71 +0.7 1,422,338 - ABZR86_RS06390 0.71 +0.5 1,422,338 - ABZR86_RS06390 0.71 -0.1 1,422,355 + ABZR86_RS06390 0.72 +0.1 1,422,356 - ABZR86_RS06390 0.72 -0.3
Or see this region's nucleotide sequence