Experiment: Chlorite 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS05455 and ABZR86_RS05460 are separated by 67 nucleotides ABZR86_RS05460 and ABZR86_RS05465 are separated by 236 nucleotides ABZR86_RS05465 and ABZR86_RS05470 are separated by 74 nucleotides
ABZR86_RS05455: ABZR86_RS05455 - 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN, at 1,228,491 to 1,229,627
_RS05455
ABZR86_RS05460: ABZR86_RS05460 - nucleoside-diphosphate kinase, at 1,229,695 to 1,230,120
_RS05460
ABZR86_RS05465: ABZR86_RS05465 - TetR/AcrR family transcriptional regulator, at 1,230,357 to 1,230,974
_RS05465
ABZR86_RS05470: ABZR86_RS05470 - 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein, at 1,231,049 to 1,233,445
_RS05470
Position (kb)
1229
1230
1231 Strain fitness (log2 ratio)
-1
0
1
2 at 1228.814 kb on - strand, within ABZR86_RS05455 at 1228.814 kb on - strand, within ABZR86_RS05455 at 1228.814 kb on - strand, within ABZR86_RS05455 at 1228.814 kb on - strand, within ABZR86_RS05455 at 1228.814 kb on - strand, within ABZR86_RS05455 at 1228.814 kb on - strand, within ABZR86_RS05455 at 1229.167 kb on + strand, within ABZR86_RS05455 at 1229.168 kb on - strand, within ABZR86_RS05455 at 1229.168 kb on - strand, within ABZR86_RS05455 at 1229.168 kb on - strand, within ABZR86_RS05455 at 1229.318 kb on - strand, within ABZR86_RS05455 at 1229.318 kb on - strand, within ABZR86_RS05455 at 1229.318 kb on - strand, within ABZR86_RS05455 at 1229.318 kb on - strand, within ABZR86_RS05455 at 1229.318 kb on - strand, within ABZR86_RS05455 at 1229.416 kb on + strand, within ABZR86_RS05455 at 1229.417 kb on - strand, within ABZR86_RS05455 at 1229.417 kb on - strand, within ABZR86_RS05455 at 1229.417 kb on - strand, within ABZR86_RS05455 at 1229.495 kb on - strand, within ABZR86_RS05455 at 1229.495 kb on - strand, within ABZR86_RS05455 at 1229.495 kb on - strand, within ABZR86_RS05455 at 1229.495 kb on - strand, within ABZR86_RS05455 at 1229.696 kb on + strand at 1229.697 kb on - strand at 1230.147 kb on - strand at 1230.147 kb on - strand at 1230.147 kb on - strand at 1230.171 kb on - strand at 1230.182 kb on + strand at 1230.183 kb on - strand at 1230.183 kb on - strand at 1230.213 kb on - strand at 1230.237 kb on + strand at 1230.245 kb on - strand at 1230.245 kb on - strand at 1230.245 kb on - strand at 1230.245 kb on - strand at 1230.245 kb on - strand at 1230.269 kb on + strand at 1230.269 kb on + strand at 1230.304 kb on + strand at 1230.335 kb on + strand at 1230.492 kb on + strand, within ABZR86_RS05465 at 1230.492 kb on + strand, within ABZR86_RS05465 at 1230.492 kb on + strand, within ABZR86_RS05465 at 1230.492 kb on + strand, within ABZR86_RS05465 at 1230.492 kb on + strand, within ABZR86_RS05465 at 1230.493 kb on - strand, within ABZR86_RS05465 at 1230.493 kb on - strand, within ABZR86_RS05465 at 1230.493 kb on - strand, within ABZR86_RS05465 at 1230.493 kb on - strand, within ABZR86_RS05465 at 1230.493 kb on - strand, within ABZR86_RS05465 at 1230.493 kb on - strand, within ABZR86_RS05465 at 1230.747 kb on + strand, within ABZR86_RS05465 at 1230.747 kb on + strand, within ABZR86_RS05465 at 1230.748 kb on - strand, within ABZR86_RS05465 at 1230.748 kb on - strand, within ABZR86_RS05465 at 1230.748 kb on - strand, within ABZR86_RS05465 at 1230.748 kb on - strand, within ABZR86_RS05465 at 1230.819 kb on + strand, within ABZR86_RS05465 at 1230.819 kb on + strand, within ABZR86_RS05465 at 1230.819 kb on + strand, within ABZR86_RS05465 at 1230.820 kb on - strand, within ABZR86_RS05465 at 1230.820 kb on - strand, within ABZR86_RS05465 at 1230.820 kb on - strand, within ABZR86_RS05465 at 1230.972 kb on + strand at 1231.034 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.32 mM remove 1,228,814 - ABZR86_RS05455 0.28 +0.8 1,228,814 - ABZR86_RS05455 0.28 +0.7 1,228,814 - ABZR86_RS05455 0.28 +1.2 1,228,814 - ABZR86_RS05455 0.28 +1.5 1,228,814 - ABZR86_RS05455 0.28 +2.1 1,228,814 - ABZR86_RS05455 0.28 +1.2 1,229,167 + ABZR86_RS05455 0.59 +0.0 1,229,168 - ABZR86_RS05455 0.60 +0.8 1,229,168 - ABZR86_RS05455 0.60 +0.8 1,229,168 - ABZR86_RS05455 0.60 +1.8 1,229,318 - ABZR86_RS05455 0.73 +1.4 1,229,318 - ABZR86_RS05455 0.73 +0.9 1,229,318 - ABZR86_RS05455 0.73 +1.0 1,229,318 - ABZR86_RS05455 0.73 +1.2 1,229,318 - ABZR86_RS05455 0.73 +1.6 1,229,416 + ABZR86_RS05455 0.81 -0.3 1,229,417 - ABZR86_RS05455 0.81 -0.1 1,229,417 - ABZR86_RS05455 0.81 +1.1 1,229,417 - ABZR86_RS05455 0.81 +0.6 1,229,495 - ABZR86_RS05455 0.88 +0.7 1,229,495 - ABZR86_RS05455 0.88 -0.9 1,229,495 - ABZR86_RS05455 0.88 +0.6 1,229,495 - ABZR86_RS05455 0.88 +1.1 1,229,696 + +0.4 1,229,697 - -0.2 1,230,147 - -0.0 1,230,147 - +0.1 1,230,147 - -1.0 1,230,171 - +0.2 1,230,182 + -0.6 1,230,183 - -1.2 1,230,183 - +0.8 1,230,213 - -0.1 1,230,237 + +0.0 1,230,245 - -0.8 1,230,245 - -0.7 1,230,245 - -1.1 1,230,245 - +0.5 1,230,245 - -1.0 1,230,269 + +0.7 1,230,269 + +0.7 1,230,304 + +0.2 1,230,335 + -1.1 1,230,492 + ABZR86_RS05465 0.22 +0.2 1,230,492 + ABZR86_RS05465 0.22 +0.5 1,230,492 + ABZR86_RS05465 0.22 -0.1 1,230,492 + ABZR86_RS05465 0.22 +0.4 1,230,492 + ABZR86_RS05465 0.22 -0.3 1,230,493 - ABZR86_RS05465 0.22 -0.0 1,230,493 - ABZR86_RS05465 0.22 -0.6 1,230,493 - ABZR86_RS05465 0.22 +0.0 1,230,493 - ABZR86_RS05465 0.22 -0.2 1,230,493 - ABZR86_RS05465 0.22 -0.6 1,230,493 - ABZR86_RS05465 0.22 -0.5 1,230,747 + ABZR86_RS05465 0.63 -0.0 1,230,747 + ABZR86_RS05465 0.63 +0.3 1,230,748 - ABZR86_RS05465 0.63 +0.6 1,230,748 - ABZR86_RS05465 0.63 +0.2 1,230,748 - ABZR86_RS05465 0.63 -0.9 1,230,748 - ABZR86_RS05465 0.63 -0.2 1,230,819 + ABZR86_RS05465 0.75 -0.1 1,230,819 + ABZR86_RS05465 0.75 +0.4 1,230,819 + ABZR86_RS05465 0.75 +0.3 1,230,820 - ABZR86_RS05465 0.75 +0.5 1,230,820 - ABZR86_RS05465 0.75 +0.4 1,230,820 - ABZR86_RS05465 0.75 -0.6 1,230,972 + +0.4 1,231,034 - -0.7
Or see this region's nucleotide sequence