Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS05405

Experiment: Chlorite 0.32 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS05400 and ABZR86_RS05405 are separated by 381 nucleotidesABZR86_RS05405 and ABZR86_RS05410 are separated by 143 nucleotides ABZR86_RS05400: ABZR86_RS05400 - type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein, at 1,215,831 to 1,216,652 _RS05400 ABZR86_RS05405: ABZR86_RS05405 - glutamine-hydrolyzing GMP synthase, at 1,217,034 to 1,218,614 _RS05405 ABZR86_RS05410: ABZR86_RS05410 - IMP dehydrogenase, at 1,218,758 to 1,220,215 _RS05410 Position (kb) 1217 1218 1219Strain fitness (log2 ratio) -2 -1 0 1 2at 1216.637 kb on + strandat 1216.725 kb on + strandat 1216.726 kb on - strandat 1216.726 kb on - strandat 1216.726 kb on - strandat 1216.726 kb on - strandat 1216.726 kb on - strandat 1216.736 kb on + strandat 1216.737 kb on - strandat 1216.737 kb on - strandat 1216.737 kb on - strandat 1216.745 kb on - strandat 1216.762 kb on + strandat 1216.762 kb on + strandat 1216.763 kb on - strandat 1216.763 kb on - strandat 1216.763 kb on - strandat 1216.763 kb on - strandat 1216.787 kb on + strandat 1216.787 kb on + strandat 1216.788 kb on - strandat 1216.788 kb on - strandat 1216.788 kb on - strandat 1216.788 kb on - strandat 1216.788 kb on - strandat 1216.809 kb on - strandat 1216.809 kb on - strandat 1216.823 kb on + strandat 1216.823 kb on + strandat 1216.823 kb on + strandat 1216.823 kb on + strandat 1216.823 kb on + strandat 1216.824 kb on - strandat 1216.824 kb on - strandat 1216.824 kb on - strandat 1216.824 kb on - strandat 1216.824 kb on - strandat 1216.824 kb on - strandat 1216.824 kb on - strandat 1216.883 kb on + strandat 1216.883 kb on + strandat 1216.944 kb on - strandat 1216.977 kb on + strandat 1216.978 kb on - strandat 1216.981 kb on + strandat 1216.981 kb on + strandat 1216.982 kb on - strandat 1218.636 kb on - strandat 1218.650 kb on - strandat 1218.650 kb on - strandat 1218.732 kb on - strandat 1218.732 kb on - strandat 1218.739 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Chlorite 0.32 mM
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1,216,637 + -0.2
1,216,725 + -0.6
1,216,726 - +2.2
1,216,726 - -0.0
1,216,726 - +0.4
1,216,726 - +0.3
1,216,726 - -0.3
1,216,736 + -0.2
1,216,737 - -0.8
1,216,737 - -0.9
1,216,737 - -0.2
1,216,745 - +0.9
1,216,762 + +0.2
1,216,762 + -2.6
1,216,763 - -1.6
1,216,763 - -0.4
1,216,763 - -0.5
1,216,763 - +0.9
1,216,787 + -0.2
1,216,787 + +0.1
1,216,788 - +0.8
1,216,788 - +1.1
1,216,788 - -0.1
1,216,788 - -0.3
1,216,788 - +0.7
1,216,809 - +0.7
1,216,809 - -0.0
1,216,823 + -0.2
1,216,823 + +1.4
1,216,823 + -0.2
1,216,823 + +0.1
1,216,823 + +0.2
1,216,824 - +0.0
1,216,824 - -0.3
1,216,824 - -0.6
1,216,824 - +0.2
1,216,824 - -1.2
1,216,824 - -0.0
1,216,824 - -0.8
1,216,883 + -0.7
1,216,883 + -0.6
1,216,944 - +0.7
1,216,977 + -0.4
1,216,978 - +1.3
1,216,981 + +0.7
1,216,981 + +0.2
1,216,982 - -0.1
1,218,636 - +0.5
1,218,650 - -0.6
1,218,650 - +0.2
1,218,732 - +0.5
1,218,732 - +0.0
1,218,739 - -0.3

Or see this region's nucleotide sequence