Experiment: Chlorite 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS04795 and ABZR86_RS04800 are separated by 211 nucleotides ABZR86_RS04800 and ABZR86_RS04805 are separated by 7 nucleotides ABZR86_RS04805 and ABZR86_RS04810 are separated by 75 nucleotides
ABZR86_RS04795: ABZR86_RS04795 - S8 family serine peptidase, at 1,071,590 to 1,072,861
_RS04795
ABZR86_RS04800: ABZR86_RS04800 - carbonic anhydrase, at 1,073,073 to 1,073,825
_RS04800
ABZR86_RS04805: ABZR86_RS04805 - hypothetical protein, at 1,073,833 to 1,074,402
_RS04805
ABZR86_RS04810: ABZR86_RS04810 - autotransporter outer membrane beta-barrel domain-containing protein, at 1,074,478 to 1,077,795
_RS04810
Position (kb)
1073
1074 Strain fitness (log2 ratio)
-1
0
1
2 at 1072.317 kb on - strand, within ABZR86_RS04795 at 1072.317 kb on - strand, within ABZR86_RS04795 at 1072.800 kb on + strand at 1072.801 kb on - strand at 1072.950 kb on + strand at 1072.950 kb on + strand at 1072.956 kb on + strand at 1072.957 kb on - strand at 1073.492 kb on - strand, within ABZR86_RS04800 at 1073.492 kb on - strand, within ABZR86_RS04800 at 1073.492 kb on - strand, within ABZR86_RS04800 at 1073.607 kb on + strand, within ABZR86_RS04800 at 1073.608 kb on - strand, within ABZR86_RS04800 at 1073.608 kb on - strand, within ABZR86_RS04800 at 1073.608 kb on - strand, within ABZR86_RS04800 at 1073.679 kb on + strand, within ABZR86_RS04800 at 1073.679 kb on + strand, within ABZR86_RS04800 at 1073.680 kb on - strand, within ABZR86_RS04800 at 1073.855 kb on + strand at 1073.855 kb on + strand at 1073.855 kb on + strand at 1073.855 kb on + strand at 1073.856 kb on - strand at 1073.856 kb on - strand at 1074.011 kb on + strand, within ABZR86_RS04805 at 1074.012 kb on - strand, within ABZR86_RS04805 at 1074.012 kb on - strand, within ABZR86_RS04805 at 1074.318 kb on - strand, within ABZR86_RS04805 at 1074.369 kb on - strand at 1074.561 kb on - strand at 1074.696 kb on + strand at 1074.696 kb on + strand at 1074.696 kb on + strand at 1074.696 kb on + strand at 1074.696 kb on + strand at 1074.697 kb on - strand at 1074.697 kb on - strand at 1074.720 kb on - strand at 1074.720 kb on - strand at 1074.720 kb on - strand at 1074.720 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.32 mM remove 1,072,317 - ABZR86_RS04795 0.57 -0.2 1,072,317 - ABZR86_RS04795 0.57 -0.7 1,072,800 + -1.6 1,072,801 - -0.0 1,072,950 + +0.2 1,072,950 + +1.0 1,072,956 + +0.1 1,072,957 - +0.6 1,073,492 - ABZR86_RS04800 0.56 -0.8 1,073,492 - ABZR86_RS04800 0.56 -0.3 1,073,492 - ABZR86_RS04800 0.56 +0.2 1,073,607 + ABZR86_RS04800 0.71 -0.2 1,073,608 - ABZR86_RS04800 0.71 +1.4 1,073,608 - ABZR86_RS04800 0.71 +0.5 1,073,608 - ABZR86_RS04800 0.71 +0.2 1,073,679 + ABZR86_RS04800 0.80 +2.2 1,073,679 + ABZR86_RS04800 0.80 +0.9 1,073,680 - ABZR86_RS04800 0.81 +0.3 1,073,855 + +0.2 1,073,855 + +0.1 1,073,855 + -0.2 1,073,855 + -0.1 1,073,856 - -0.2 1,073,856 - +0.2 1,074,011 + ABZR86_RS04805 0.31 -0.5 1,074,012 - ABZR86_RS04805 0.31 +0.5 1,074,012 - ABZR86_RS04805 0.31 -0.4 1,074,318 - ABZR86_RS04805 0.85 +0.7 1,074,369 - -1.0 1,074,561 - -0.6 1,074,696 + +0.5 1,074,696 + +0.5 1,074,696 + +1.4 1,074,696 + -0.2 1,074,696 + +0.5 1,074,697 - -0.8 1,074,697 - +0.6 1,074,720 - +0.6 1,074,720 - +0.1 1,074,720 - -0.8 1,074,720 - +0.6
Or see this region's nucleotide sequence