Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS04800

Experiment: Chlorite 0.32 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS04795 and ABZR86_RS04800 are separated by 211 nucleotidesABZR86_RS04800 and ABZR86_RS04805 are separated by 7 nucleotidesABZR86_RS04805 and ABZR86_RS04810 are separated by 75 nucleotides ABZR86_RS04795: ABZR86_RS04795 - S8 family serine peptidase, at 1,071,590 to 1,072,861 _RS04795 ABZR86_RS04800: ABZR86_RS04800 - carbonic anhydrase, at 1,073,073 to 1,073,825 _RS04800 ABZR86_RS04805: ABZR86_RS04805 - hypothetical protein, at 1,073,833 to 1,074,402 _RS04805 ABZR86_RS04810: ABZR86_RS04810 - autotransporter outer membrane beta-barrel domain-containing protein, at 1,074,478 to 1,077,795 _RS04810 Position (kb) 1073 1074Strain fitness (log2 ratio) -1 0 1 2at 1072.317 kb on - strand, within ABZR86_RS04795at 1072.317 kb on - strand, within ABZR86_RS04795at 1072.800 kb on + strandat 1072.801 kb on - strandat 1072.950 kb on + strandat 1072.950 kb on + strandat 1072.956 kb on + strandat 1072.957 kb on - strandat 1073.492 kb on - strand, within ABZR86_RS04800at 1073.492 kb on - strand, within ABZR86_RS04800at 1073.492 kb on - strand, within ABZR86_RS04800at 1073.607 kb on + strand, within ABZR86_RS04800at 1073.608 kb on - strand, within ABZR86_RS04800at 1073.608 kb on - strand, within ABZR86_RS04800at 1073.608 kb on - strand, within ABZR86_RS04800at 1073.679 kb on + strand, within ABZR86_RS04800at 1073.679 kb on + strand, within ABZR86_RS04800at 1073.680 kb on - strand, within ABZR86_RS04800at 1073.855 kb on + strandat 1073.855 kb on + strandat 1073.855 kb on + strandat 1073.855 kb on + strandat 1073.856 kb on - strandat 1073.856 kb on - strandat 1074.011 kb on + strand, within ABZR86_RS04805at 1074.012 kb on - strand, within ABZR86_RS04805at 1074.012 kb on - strand, within ABZR86_RS04805at 1074.318 kb on - strand, within ABZR86_RS04805at 1074.369 kb on - strandat 1074.561 kb on - strandat 1074.696 kb on + strandat 1074.696 kb on + strandat 1074.696 kb on + strandat 1074.696 kb on + strandat 1074.696 kb on + strandat 1074.697 kb on - strandat 1074.697 kb on - strandat 1074.720 kb on - strandat 1074.720 kb on - strandat 1074.720 kb on - strandat 1074.720 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Chlorite 0.32 mM
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1,072,317 - ABZR86_RS04795 0.57 -0.2
1,072,317 - ABZR86_RS04795 0.57 -0.7
1,072,800 + -1.6
1,072,801 - -0.0
1,072,950 + +0.2
1,072,950 + +1.0
1,072,956 + +0.1
1,072,957 - +0.6
1,073,492 - ABZR86_RS04800 0.56 -0.8
1,073,492 - ABZR86_RS04800 0.56 -0.3
1,073,492 - ABZR86_RS04800 0.56 +0.2
1,073,607 + ABZR86_RS04800 0.71 -0.2
1,073,608 - ABZR86_RS04800 0.71 +1.4
1,073,608 - ABZR86_RS04800 0.71 +0.5
1,073,608 - ABZR86_RS04800 0.71 +0.2
1,073,679 + ABZR86_RS04800 0.80 +2.2
1,073,679 + ABZR86_RS04800 0.80 +0.9
1,073,680 - ABZR86_RS04800 0.81 +0.3
1,073,855 + +0.2
1,073,855 + +0.1
1,073,855 + -0.2
1,073,855 + -0.1
1,073,856 - -0.2
1,073,856 - +0.2
1,074,011 + ABZR86_RS04805 0.31 -0.5
1,074,012 - ABZR86_RS04805 0.31 +0.5
1,074,012 - ABZR86_RS04805 0.31 -0.4
1,074,318 - ABZR86_RS04805 0.85 +0.7
1,074,369 - -1.0
1,074,561 - -0.6
1,074,696 + +0.5
1,074,696 + +0.5
1,074,696 + +1.4
1,074,696 + -0.2
1,074,696 + +0.5
1,074,697 - -0.8
1,074,697 - +0.6
1,074,720 - +0.6
1,074,720 - +0.1
1,074,720 - -0.8
1,074,720 - +0.6

Or see this region's nucleotide sequence