Experiment: Chlorite 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS04395 and ABZR86_RS04400 are separated by 52 nucleotides ABZR86_RS04400 and ABZR86_RS04405 are separated by 202 nucleotides ABZR86_RS04405 and ABZR86_RS04410 are separated by 203 nucleotides ABZR86_RS04410 and ABZR86_RS04415 are separated by 117 nucleotides ABZR86_RS04415 and ABZR86_RS04420 overlap by 4 nucleotides
ABZR86_RS04395: ABZR86_RS04395 - hypothetical protein, at 986,818 to 986,967
_RS04395
ABZR86_RS04400: ABZR86_RS04400 - hypothetical protein, at 987,020 to 987,271
_RS04400
ABZR86_RS04405: ABZR86_RS04405 - dodecin family protein, at 987,474 to 987,680
_RS04405
ABZR86_RS04410: ABZR86_RS04410 - CBS domain-containing protein, at 987,884 to 988,600
_RS04410
ABZR86_RS04415: ABZR86_RS04415 - sulfite exporter TauE/SafE family protein, at 988,718 to 989,437
_RS04415
ABZR86_RS04420: ABZR86_RS04420 - cbb3-type cytochrome oxidase assembly protein CcoS, at 989,434 to 989,610
_RS04420
Position (kb) 987
988
989 Strain fitness (log2 ratio) -2
-1
0
1 at 986.899 kb on + strand, within ABZR86_RS04395 at 986.899 kb on + strand, within ABZR86_RS04395 at 986.899 kb on + strand, within ABZR86_RS04395 at 986.900 kb on - strand, within ABZR86_RS04395 at 986.900 kb on - strand, within ABZR86_RS04395 at 986.900 kb on - strand, within ABZR86_RS04395 at 986.900 kb on - strand, within ABZR86_RS04395 at 986.900 kb on - strand, within ABZR86_RS04395 at 986.900 kb on - strand, within ABZR86_RS04395 at 986.982 kb on + strand at 986.982 kb on + strand at 986.982 kb on + strand at 986.982 kb on + strand at 986.982 kb on + strand at 986.982 kb on + strand at 986.983 kb on - strand at 986.983 kb on - strand at 986.983 kb on - strand at 986.983 kb on - strand at 986.983 kb on - strand at 987.065 kb on - strand, within ABZR86_RS04400 at 987.345 kb on + strand at 987.345 kb on + strand at 987.345 kb on + strand at 987.346 kb on - strand at 987.346 kb on - strand at 987.346 kb on - strand at 987.464 kb on - strand at 987.485 kb on + strand at 987.486 kb on - strand at 987.486 kb on - strand at 987.754 kb on + strand at 987.754 kb on + strand at 987.754 kb on + strand at 987.754 kb on + strand at 987.754 kb on + strand at 987.754 kb on + strand at 987.754 kb on + strand at 987.754 kb on + strand at 987.754 kb on + strand at 987.754 kb on + strand at 987.754 kb on + strand at 987.754 kb on + strand at 987.755 kb on - strand at 987.755 kb on - strand at 987.755 kb on - strand at 987.755 kb on - strand at 987.755 kb on - strand at 987.755 kb on - strand at 987.755 kb on - strand at 987.755 kb on - strand at 987.755 kb on - strand at 987.755 kb on - strand at 987.755 kb on - strand at 987.935 kb on - strand at 987.935 kb on - strand at 987.935 kb on - strand at 988.228 kb on + strand, within ABZR86_RS04410 at 988.228 kb on + strand, within ABZR86_RS04410 at 988.228 kb on + strand, within ABZR86_RS04410 at 988.228 kb on + strand, within ABZR86_RS04410 at 988.228 kb on + strand, within ABZR86_RS04410 at 988.228 kb on + strand, within ABZR86_RS04410 at 988.229 kb on - strand, within ABZR86_RS04410 at 988.229 kb on - strand, within ABZR86_RS04410 at 988.229 kb on - strand, within ABZR86_RS04410 at 988.229 kb on - strand, within ABZR86_RS04410 at 988.229 kb on - strand, within ABZR86_RS04410 at 988.263 kb on + strand, within ABZR86_RS04410 at 988.263 kb on + strand, within ABZR86_RS04410 at 988.264 kb on - strand, within ABZR86_RS04410 at 988.264 kb on - strand, within ABZR86_RS04410 at 988.264 kb on - strand, within ABZR86_RS04410 at 988.425 kb on + strand, within ABZR86_RS04410 at 988.425 kb on + strand, within ABZR86_RS04410 at 988.425 kb on + strand, within ABZR86_RS04410 at 988.425 kb on + strand, within ABZR86_RS04410 at 988.425 kb on + strand, within ABZR86_RS04410 at 988.425 kb on + strand, within ABZR86_RS04410 at 988.425 kb on + strand, within ABZR86_RS04410 at 988.425 kb on + strand, within ABZR86_RS04410 at 988.425 kb on + strand, within ABZR86_RS04410 at 988.425 kb on + strand, within ABZR86_RS04410 at 988.425 kb on + strand, within ABZR86_RS04410 at 988.425 kb on + strand, within ABZR86_RS04410 at 988.426 kb on - strand, within ABZR86_RS04410 at 988.426 kb on - strand, within ABZR86_RS04410 at 988.426 kb on - strand, within ABZR86_RS04410 at 988.426 kb on - strand, within ABZR86_RS04410 at 988.426 kb on - strand, within ABZR86_RS04410 at 988.426 kb on - strand, within ABZR86_RS04410 at 988.426 kb on - strand, within ABZR86_RS04410 at 988.426 kb on - strand, within ABZR86_RS04410 at 988.450 kb on - strand, within ABZR86_RS04410 at 988.527 kb on + strand, within ABZR86_RS04410 at 988.528 kb on - strand, within ABZR86_RS04410 at 988.528 kb on - strand, within ABZR86_RS04410 at 988.528 kb on - strand, within ABZR86_RS04410 at 988.549 kb on + strand at 988.549 kb on + strand at 988.598 kb on + strand at 988.598 kb on + strand at 988.598 kb on + strand at 988.598 kb on + strand at 988.598 kb on + strand at 988.598 kb on + strand at 988.598 kb on + strand at 988.598 kb on + strand at 988.598 kb on + strand at 988.598 kb on + strand at 988.598 kb on + strand at 988.598 kb on + strand at 988.598 kb on + strand at 988.598 kb on + strand at 988.598 kb on + strand at 988.598 kb on + strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.599 kb on - strand at 988.631 kb on + strand at 988.684 kb on + strand at 988.684 kb on + strand at 988.685 kb on - strand at 988.685 kb on - strand at 988.685 kb on - strand at 988.685 kb on - strand at 988.719 kb on + strand at 988.719 kb on + strand at 988.719 kb on + strand at 988.720 kb on - strand at 988.720 kb on - strand at 988.720 kb on - strand at 988.720 kb on - strand at 988.720 kb on - strand at 988.720 kb on - strand at 988.720 kb on - strand at 988.980 kb on + strand, within ABZR86_RS04415 at 988.980 kb on + strand, within ABZR86_RS04415 at 988.980 kb on + strand, within ABZR86_RS04415 at 988.981 kb on - strand, within ABZR86_RS04415 at 988.981 kb on - strand, within ABZR86_RS04415 at 989.259 kb on + strand, within ABZR86_RS04415 at 989.260 kb on - strand, within ABZR86_RS04415 at 989.283 kb on + strand, within ABZR86_RS04415 at 989.284 kb on - strand, within ABZR86_RS04415 at 989.284 kb on - strand, within ABZR86_RS04415 at 989.284 kb on - strand, within ABZR86_RS04415 at 989.495 kb on - strand, within ABZR86_RS04420 at 989.495 kb on - strand, within ABZR86_RS04420 at 989.495 kb on - strand, within ABZR86_RS04420
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.32 mM remove 986,899 + ABZR86_RS04395 0.54 +0.1 986,899 + ABZR86_RS04395 0.54 +0.2 986,899 + ABZR86_RS04395 0.54 -0.8 986,900 - ABZR86_RS04395 0.55 -0.2 986,900 - ABZR86_RS04395 0.55 -0.8 986,900 - ABZR86_RS04395 0.55 -0.0 986,900 - ABZR86_RS04395 0.55 +0.3 986,900 - ABZR86_RS04395 0.55 +0.3 986,900 - ABZR86_RS04395 0.55 +0.2 986,982 + +0.7 986,982 + -0.5 986,982 + -0.2 986,982 + +0.3 986,982 + -0.3 986,982 + -0.3 986,983 - +0.4 986,983 - +0.4 986,983 - -0.2 986,983 - -0.7 986,983 - +0.5 987,065 - ABZR86_RS04400 0.18 -0.5 987,345 + +0.1 987,345 + +0.6 987,345 + -0.0 987,346 - +0.6 987,346 - -0.1 987,346 - +0.2 987,464 - +0.5 987,485 + +0.7 987,486 - -0.2 987,486 - -0.9 987,754 + +0.0 987,754 + -0.6 987,754 + -0.3 987,754 + +0.2 987,754 + -0.4 987,754 + -0.7 987,754 + -0.0 987,754 + +0.4 987,754 + +0.4 987,754 + +0.2 987,754 + -0.3 987,754 + +0.2 987,755 - +0.2 987,755 - -0.6 987,755 - +0.2 987,755 - -0.4 987,755 - -0.3 987,755 - +0.1 987,755 - +0.2 987,755 - +0.7 987,755 - +0.1 987,755 - -0.0 987,755 - +0.2 987,935 - +0.1 987,935 - -0.1 987,935 - -0.1 988,228 + ABZR86_RS04410 0.48 +0.1 988,228 + ABZR86_RS04410 0.48 -0.9 988,228 + ABZR86_RS04410 0.48 +0.4 988,228 + ABZR86_RS04410 0.48 -0.4 988,228 + ABZR86_RS04410 0.48 -1.1 988,228 + ABZR86_RS04410 0.48 +0.1 988,229 - ABZR86_RS04410 0.48 +0.5 988,229 - ABZR86_RS04410 0.48 -1.6 988,229 - ABZR86_RS04410 0.48 -0.5 988,229 - ABZR86_RS04410 0.48 +0.2 988,229 - ABZR86_RS04410 0.48 +1.4 988,263 + ABZR86_RS04410 0.53 -0.1 988,263 + ABZR86_RS04410 0.53 -1.1 988,264 - ABZR86_RS04410 0.53 +0.0 988,264 - ABZR86_RS04410 0.53 -0.0 988,264 - ABZR86_RS04410 0.53 -1.2 988,425 + ABZR86_RS04410 0.75 +0.2 988,425 + ABZR86_RS04410 0.75 -0.1 988,425 + ABZR86_RS04410 0.75 -0.1 988,425 + ABZR86_RS04410 0.75 -0.7 988,425 + ABZR86_RS04410 0.75 -0.0 988,425 + ABZR86_RS04410 0.75 +1.0 988,425 + ABZR86_RS04410 0.75 +0.3 988,425 + ABZR86_RS04410 0.75 +0.2 988,425 + ABZR86_RS04410 0.75 -0.2 988,425 + ABZR86_RS04410 0.75 -0.8 988,425 + ABZR86_RS04410 0.75 -0.1 988,425 + ABZR86_RS04410 0.75 -0.8 988,426 - ABZR86_RS04410 0.76 -0.0 988,426 - ABZR86_RS04410 0.76 -0.8 988,426 - ABZR86_RS04410 0.76 -0.7 988,426 - ABZR86_RS04410 0.76 +0.2 988,426 - ABZR86_RS04410 0.76 -0.3 988,426 - ABZR86_RS04410 0.76 -0.4 988,426 - ABZR86_RS04410 0.76 -1.2 988,426 - ABZR86_RS04410 0.76 +0.8 988,450 - ABZR86_RS04410 0.79 +0.0 988,527 + ABZR86_RS04410 0.90 +0.2 988,528 - ABZR86_RS04410 0.90 +0.1 988,528 - ABZR86_RS04410 0.90 +1.0 988,528 - ABZR86_RS04410 0.90 +0.3 988,549 + -1.2 988,549 + +0.5 988,598 + +0.4 988,598 + +0.9 988,598 + -0.1 988,598 + -1.2 988,598 + -0.3 988,598 + +0.2 988,598 + -0.1 988,598 + +0.4 988,598 + +0.4 988,598 + +0.4 988,598 + -0.3 988,598 + +0.0 988,598 + +0.3 988,598 + -0.3 988,598 + -1.1 988,598 + -0.2 988,599 - +0.2 988,599 - -1.0 988,599 - -1.6 988,599 - +0.4 988,599 - -0.2 988,599 - -0.2 988,599 - +0.4 988,599 - +0.1 988,599 - -0.5 988,599 - -0.1 988,599 - -0.6 988,599 - -0.3 988,599 - -0.2 988,599 - +0.5 988,599 - +0.6 988,599 - -0.3 988,599 - +0.3 988,599 - -0.0 988,599 - +0.3 988,599 - -0.7 988,599 - -0.7 988,599 - +0.1 988,599 - +0.1 988,631 + +0.1 988,684 + -0.7 988,684 + -2.4 988,685 - +0.3 988,685 - +0.0 988,685 - -0.2 988,685 - -0.4 988,719 + -0.2 988,719 + +0.1 988,719 + +0.6 988,720 - +0.2 988,720 - +0.3 988,720 - +0.2 988,720 - -0.2 988,720 - -0.0 988,720 - +0.3 988,720 - -0.3 988,980 + ABZR86_RS04415 0.36 -0.5 988,980 + ABZR86_RS04415 0.36 +0.9 988,980 + ABZR86_RS04415 0.36 -0.4 988,981 - ABZR86_RS04415 0.37 +0.3 988,981 - ABZR86_RS04415 0.37 -0.7 989,259 + ABZR86_RS04415 0.75 -0.2 989,260 - ABZR86_RS04415 0.75 -0.2 989,283 + ABZR86_RS04415 0.78 -0.1 989,284 - ABZR86_RS04415 0.79 -0.4 989,284 - ABZR86_RS04415 0.79 +0.4 989,284 - ABZR86_RS04415 0.79 +0.3 989,495 - ABZR86_RS04420 0.34 -0.2 989,495 - ABZR86_RS04420 0.34 -0.0 989,495 - ABZR86_RS04420 0.34 +0.2
Or see this region's nucleotide sequence