Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03152

Experiment: PYE with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 5 vol%
3,307,545	-		CCNA_03151	0.65	+0.2
3,307,545	-		CCNA_03151	0.65	-0.2
3,307,545	-		CCNA_03151	0.65	-2.4
3,307,565	+		CCNA_03151	0.66	-0.7
3,307,580	+		CCNA_03151	0.67	-2.2
3,307,585	+		CCNA_03151	0.67	-0.9
3,307,593	-		CCNA_03151	0.68	-1.3
3,307,603	+		CCNA_03151	0.68	-1.3
3,307,603	+		CCNA_03151	0.68	+0.3
3,307,610	-		CCNA_03151	0.68	-1.4
3,307,624	+		CCNA_03151	0.69	-1.2
3,307,629	+		CCNA_03151	0.69	-1.8
3,307,665	+		CCNA_03151	0.71	+1.2
3,307,676	+		CCNA_03151	0.72	-0.1
3,307,700	-		CCNA_03151	0.73	+1.3
3,307,752	-		CCNA_03151	0.76	+0.0
3,307,767	+		CCNA_03151	0.77	-0.8
3,307,837	+		CCNA_03151	0.80	-0.2
3,307,881	+		CCNA_03151	0.83	-0.7
3,307,889	-		CCNA_03151	0.83	+0.5
3,307,903	+		CCNA_03151	0.84	+1.3
3,307,937	-		CCNA_03151	0.86	+1.1
3,307,970	+		CCNA_03151	0.87	+0.5
3,307,977	+		CCNA_03151	0.88	+0.6
3,307,980	-		CCNA_03151	0.88	-1.6
3,307,990	-		CCNA_03151	0.88	-1.9
3,308,034	+				-2.6
3,308,034	+				+0.0
3,308,034	+				+0.8
3,308,034	+				+0.6
3,308,034	+				+0.1
3,308,034	+				+1.5
3,308,042	-				+0.2
3,308,042	-				+0.0
3,308,042	-				+0.0
3,308,042	-				+0.9
3,308,042	-				+0.8
3,308,042	-				-0.2
3,308,042	-				-0.7
3,308,042	-				-0.5
3,308,042	-				-2.7
3,308,059	+				+1.2
3,308,072	-				+1.3
3,308,096	+				+0.2
3,308,104	-				+1.6
3,308,112	+				+0.8
3,308,148	+				-1.0
3,308,156	-				-0.7
3,308,166	-				+0.8
3,308,188	+				-0.2
3,308,207	-				-2.5
3,308,207	-				+1.3
3,308,214	-				+0.4
3,308,288	+				+0.8
3,308,290	+				+0.9
3,308,310	-				-0.1
3,308,310	-				-0.7
3,308,332	-				+0.0
3,308,353	-				+2.1
3,308,409	-				+0.5
3,308,428	+				-0.4
3,308,428	+				-0.5
3,308,489	+				-1.7
3,308,498	+				+1.3
3,308,516	+				+0.7
3,308,563	+		CCNA_03152	0.12	-0.0
3,308,585	+		CCNA_03152	0.17	+1.1
3,308,586	+		CCNA_03152	0.17	+1.4
3,308,631	-		CCNA_03152	0.28	-0.9
3,308,661	-		CCNA_03152	0.36	-0.1
3,308,675	-		CCNA_03152	0.39	-0.8
3,308,711	+		CCNA_03152	0.48	+0.6
3,308,786	-		CCNA_03152	0.66	-0.5
3,308,794	+		CCNA_03152	0.68	-0.1
3,308,794	+		CCNA_03152	0.68	-0.1
3,308,794	+		CCNA_03152	0.68	+2.0
3,308,794	+		CCNA_03152	0.68	+0.8
3,308,802	-		CCNA_03152	0.70	+0.8
3,308,804	+		CCNA_03152	0.70	+1.0
3,308,804	+		CCNA_03152	0.70	+0.9
3,308,808	+		CCNA_03152	0.71	+1.0
3,308,808	+		CCNA_03152	0.71	+1.3
3,308,808	+		CCNA_03152	0.71	+0.8
3,308,818	+		CCNA_03152	0.73	+1.0
3,308,818	+		CCNA_03152	0.73	+1.2
3,308,818	+		CCNA_03152	0.73	+1.6
3,308,826	-		CCNA_03152	0.75	+0.2
3,308,826	-		CCNA_03152	0.75	+0.2
3,308,826	-		CCNA_03152	0.75	+0.4
3,308,828	+		CCNA_03152	0.76	+1.2
3,308,828	+		CCNA_03152	0.76	+1.2
3,308,859	-		CCNA_03152	0.83	-1.1
3,308,904	-				-1.1
3,308,922	+				-1.9
3,308,922	+				+1.2
3,308,963	-				-1.2
3,308,988	+				+0.1
3,308,990	+				-1.2
3,308,990	+				-0.5
3,308,990	+				-1.4
3,309,044	+		CCNA_03153	0.17	-0.1
3,309,104	+		CCNA_03153	0.25	+1.1
3,309,112	-		CCNA_03153	0.26	-1.0
3,309,160	-		CCNA_03153	0.33	-0.8
3,309,194	-		CCNA_03153	0.38	-2.1
3,309,199	-		CCNA_03153	0.39	+0.0
3,309,201	+		CCNA_03153	0.39	+0.2
3,309,204	-		CCNA_03153	0.39	-0.2
3,309,264	+		CCNA_03153	0.48	-0.0
3,309,264	+		CCNA_03153	0.48	+1.3
3,309,272	-		CCNA_03153	0.49	+0.5
3,309,272	-		CCNA_03153	0.49	-0.2
3,309,312	-		CCNA_03153	0.55	+3.1
3,309,331	-		CCNA_03153	0.57	+1.0
3,309,366	-		CCNA_03153	0.62	+0.3
3,309,400	-		CCNA_03153	0.67	+0.0
3,309,408	+		CCNA_03153	0.68	-0.7
3,309,416	-		CCNA_03153	0.69	-0.2
3,309,449	+		CCNA_03153	0.74	-0.8
3,309,486	+		CCNA_03153	0.79	-0.4
3,309,486	+		CCNA_03153	0.79	-0.1
3,309,515	-		CCNA_03153	0.83	-1.0
3,309,531	+		CCNA_03153	0.85	+1.3
3,309,536	+		CCNA_03153	0.86	-0.1
3,309,537	-		CCNA_03153	0.86	+0.3
3,309,537	-		CCNA_03153	0.86	-0.1
3,309,541	+		CCNA_03153	0.87	-0.2
3,309,596	+				+0.8
3,309,604	-				+1.1
3,309,664	+				+0.7
3,309,664	+				+0.6
3,309,672	-				+0.2
3,309,676	+				+0.9
3,309,684	+				+0.3
3,309,685	+				+2.0
3,309,692	-				+0.9
3,309,711	+				+1.0
3,309,727	+				+0.9
3,309,763	+				+0.7
3,309,763	+				-0.5
3,309,771	-				-1.6
3,309,777	+				-0.8
3,309,790	+				+0.1
3,309,810	+				+0.9
3,309,818	-		CCNA_03154	0.10	-1.3
3,309,892	+		CCNA_03154	0.15	-0.7
3,309,907	+		CCNA_03154	0.16	+0.2