Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01548

Experiment: PYE with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 5 vol%
1,661,098	-				-1.4
1,661,139	+				+1.5
1,661,146	+				+1.4
1,661,147	-				-0.7
1,661,165	+				+0.8
1,661,182	+				+0.8
1,661,216	-				+0.9
1,661,248	+				+1.5
1,661,300	+		CCNA_01548	0.13	+0.7
1,661,310	+		CCNA_01548	0.13	+2.7
1,661,312	-		CCNA_01548	0.14	+0.9
1,661,318	-		CCNA_01548	0.14	+1.4
1,661,325	+		CCNA_01548	0.15	+0.8
1,661,333	-		CCNA_01548	0.15	-0.3
1,661,369	+		CCNA_01548	0.18	+1.0
1,661,377	-		CCNA_01548	0.19	-0.7
1,661,377	-		CCNA_01548	0.19	+0.9
1,661,414	-		CCNA_01548	0.22	-0.5
1,661,434	+		CCNA_01548	0.24	+1.0
1,661,434	+		CCNA_01548	0.24	+0.5
1,661,434	+		CCNA_01548	0.24	+0.6
1,661,459	-		CCNA_01548	0.26	+0.8
1,661,489	+		CCNA_01548	0.28	+2.9
1,661,509	+		CCNA_01548	0.30	+0.4
1,661,522	+		CCNA_01548	0.31	+1.6
1,661,532	+		CCNA_01548	0.32	-1.2
1,661,576	+		CCNA_01548	0.35	+0.2
1,661,581	+		CCNA_01548	0.36	+1.1
1,661,735	+		CCNA_01548	0.48	+0.0
1,661,745	+		CCNA_01548	0.49	-0.3
1,661,745	+		CCNA_01548	0.49	+1.2
1,661,745	+		CCNA_01548	0.49	+0.7
1,661,753	-		CCNA_01548	0.50	-0.9
1,661,771	+		CCNA_01548	0.51	+1.2
1,661,779	-		CCNA_01548	0.52	+1.5
1,661,826	+		CCNA_01548	0.56	+0.8
1,661,834	-		CCNA_01548	0.57	-0.4
1,661,869	-		CCNA_01548	0.60	-0.6
1,661,930	+		CCNA_01548	0.65	+0.5
1,661,986	+		CCNA_01548	0.69	+1.5
1,661,986	+		CCNA_01548	0.69	+0.3
1,661,994	-		CCNA_01548	0.70	-1.0
1,662,024	+		CCNA_01548	0.72	+1.6
1,662,041	+		CCNA_01548	0.74	+0.6
1,662,042	-		CCNA_01548	0.74	-1.1
1,662,088	+		CCNA_01548	0.78	-0.8
1,662,088	+		CCNA_01548	0.78	+0.6
1,662,088	+		CCNA_01548	0.78	+0.9
1,662,096	-		CCNA_01548	0.78	+0.7
1,662,119	+		CCNA_01548	0.80	+0.6
1,662,185	-		CCNA_01548	0.86	-0.4
1,662,204	-		CCNA_01548	0.87	+0.1
1,662,210	-		CCNA_01548	0.88	+0.7
1,662,210	-		CCNA_01548	0.88	-0.7
1,662,253	+				+1.1
1,662,253	-				+1.7
1,662,300	-				-0.4
1,662,333	-				-0.3
1,662,346	-				-1.3
1,662,349	+				+0.2
1,662,354	+				+0.9
1,662,354	+				-1.0
1,662,400	+				+2.1
1,662,400	-				+0.5
1,662,466	+				+0.7
1,662,466	+				-1.1
1,662,469	-				+2.3
1,662,474	-				+0.6
1,662,474	-				-1.7
1,662,474	-				+0.6
1,662,513	+				-1.3
1,662,531	-				-0.2
1,662,578	-		CCNA_01549	0.11	+0.8
1,662,656	-		CCNA_01549	0.15	+1.3
1,662,656	-		CCNA_01549	0.15	+0.4
1,662,662	+		CCNA_01549	0.15	-0.4
1,662,693	-		CCNA_01549	0.17	+0.1
1,662,696	+		CCNA_01549	0.17	+0.1
1,662,704	-		CCNA_01549	0.17	-0.0
1,662,759	-		CCNA_01549	0.20	+0.2
1,662,765	+		CCNA_01549	0.20	+0.4
1,662,779	+		CCNA_01549	0.21	-0.7
1,662,846	+		CCNA_01549	0.25	+1.2
1,662,883	-		CCNA_01549	0.27	+1.0
1,662,950	-		CCNA_01549	0.30	+0.1
1,662,951	-		CCNA_01549	0.30	+0.2
1,662,951	-		CCNA_01549	0.30	-0.4
1,662,951	-		CCNA_01549	0.30	+0.8
1,662,953	-		CCNA_01549	0.30	+2.3
1,662,987	+		CCNA_01549	0.32	+0.8
1,662,987	+		CCNA_01549	0.32	+1.4
1,662,987	+		CCNA_01549	0.32	-0.8
1,662,997	+		CCNA_01549	0.33	+1.4
1,662,997	+		CCNA_01549	0.33	-0.5
1,662,997	+		CCNA_01549	0.33	-1.0
1,663,005	-		CCNA_01549	0.33	+0.6
1,663,005	-		CCNA_01549	0.33	+0.5
1,663,013	-		CCNA_01549	0.33	+0.4
1,663,036	+		CCNA_01549	0.35	-0.2
1,663,044	-				+3.5
1,663,086	+		CCNA_01549	0.37	-0.3
1,663,098	-		CCNA_01549	0.38	-0.4
1,663,126	+		CCNA_01549	0.39	+0.9
1,663,134	-		CCNA_01549	0.40	+0.2
1,663,134	-		CCNA_01549	0.40	-1.1
1,663,196	+		CCNA_01549	0.43	-0.3
1,663,271	-		CCNA_01549	0.47	-0.7
1,663,286	-				+2.9
1,663,286	-		CCNA_01549	0.48	-1.3