Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01084

Experiment: PYE with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 5 vol%
1,187,929	+		CCNA_01083	0.52	-0.0
1,187,966	+		CCNA_01083	0.54	+0.5
1,187,966	+		CCNA_01083	0.54	+0.9
1,187,966	+		CCNA_01083	0.54	-0.1
1,187,966	+		CCNA_01083	0.54	-0.8
1,187,974	-		CCNA_01083	0.55	+0.5
1,187,974	-		CCNA_01083	0.55	-1.1
1,187,974	-		CCNA_01083	0.55	-0.8
1,187,974	-		CCNA_01083	0.55	+1.4
1,187,974	-		CCNA_01083	0.55	-2.4
1,188,010	+		CCNA_01083	0.56	+1.3
1,188,010	+		CCNA_01083	0.56	+0.1
1,188,016	-		CCNA_01083	0.57	-1.0
1,188,021	+		CCNA_01083	0.57	+1.6
1,188,021	+		CCNA_01083	0.57	+0.5
1,188,021	+		CCNA_01083	0.57	+1.1
1,188,021	+		CCNA_01083	0.57	+0.2
1,188,021	+		CCNA_01083	0.57	-0.5
1,188,021	+		CCNA_01083	0.57	-1.3
1,188,022	+		CCNA_01083	0.57	-0.2
1,188,022	+		CCNA_01083	0.57	-0.4
1,188,029	-		CCNA_01083	0.57	-0.2
1,188,029	-		CCNA_01083	0.57	-3.0
1,188,029	-		CCNA_01083	0.57	+0.7
1,188,029	-		CCNA_01083	0.57	-1.8
1,188,029	-		CCNA_01083	0.57	-1.6
1,188,032	+		CCNA_01083	0.58	+0.2
1,188,032	+		CCNA_01083	0.58	+1.1
1,188,032	+		CCNA_01083	0.58	+1.0
1,188,032	+		CCNA_01083	0.58	-1.2
1,188,032	+		CCNA_01083	0.58	-0.4
1,188,032	+		CCNA_01083	0.58	-0.2
1,188,040	-		CCNA_01083	0.58	+0.8
1,188,040	-		CCNA_01083	0.58	+0.5
1,188,040	-		CCNA_01083	0.58	-1.8
1,188,042	+				+0.9
1,188,061	+		CCNA_01083	0.59	+1.3
1,188,095	+		CCNA_01083	0.61	-0.2
1,188,103	-		CCNA_01083	0.61	-2.1
1,188,113	+		CCNA_01083	0.62	+1.3
1,188,137	-		CCNA_01083	0.63	+0.7
1,188,151	-		CCNA_01083	0.64	-2.8
1,188,229	-		CCNA_01083	0.67	+0.6
1,188,243	+		CCNA_01083	0.68	-0.2
1,188,270	-		CCNA_01083	0.70	-0.1
1,188,275	+		CCNA_01083	0.70	-2.0
1,188,302	+		CCNA_01083	0.71	-0.9
1,188,339	+		CCNA_01083	0.73	-0.4
1,188,400	+		CCNA_01083	0.76	+1.0
1,188,457	+		CCNA_01083	0.79	+1.1
1,188,458	-		CCNA_01083	0.79	-1.3
1,188,462	+		CCNA_01083	0.79	-0.6
1,188,462	+		CCNA_01083	0.79	+0.4
1,188,480	+		CCNA_01083	0.80	-0.2
1,188,516	+		CCNA_01083	0.82	-0.5
1,188,530	+		CCNA_01083	0.83	-0.3
1,188,531	+		CCNA_01083	0.83	+0.4
1,188,552	+		CCNA_01083	0.84	-3.3
1,188,653	+		CCNA_01083	0.89	-0.9
1,188,668	+		CCNA_01083	0.90	+0.6
1,188,669	+		CCNA_01083	0.90	-1.9
1,188,700	+				-1.4
1,188,723	+				+1.3
1,188,723	+				-1.1
1,188,723	+				-1.2
1,188,723	+				+0.2
1,188,723	+				+0.5
1,188,723	+				+0.9
1,188,754	+				-1.0
1,188,754	+				+0.1
1,188,761	+				+0.6
1,188,787	+				-0.1
1,188,892	+				+0.2
1,188,902	+				+0.0
1,188,912	+				+0.9
1,188,912	+				+0.7
1,188,922	+				+0.5
1,188,922	+				-0.4
1,188,930	-				-1.2
1,188,930	-				-2.4
1,188,952	+				-1.0
1,188,981	-				+0.1
1,189,009	-		CCNA_01084	0.11	-1.6
1,189,059	-		CCNA_01084	0.15	-1.1
1,189,095	+		CCNA_01084	0.18	-1.5
1,189,324	+		CCNA_01084	0.36	-1.5
1,189,332	-		CCNA_01084	0.37	+1.3
1,189,332	-		CCNA_01084	0.37	-0.7
1,189,495	-		CCNA_01084	0.50	-1.7
1,189,527	-		CCNA_01084	0.53	-0.3
1,189,534	+		CCNA_01084	0.53	-1.9
1,189,534	+		CCNA_01084	0.53	-0.5
1,189,534	+		CCNA_01084	0.53	-2.4
1,189,534	+		CCNA_01084	0.53	+0.5
1,189,542	-		CCNA_01084	0.54	-0.5
1,189,542	-		CCNA_01084	0.54	-1.8
1,189,542	-		CCNA_01084	0.54	-0.3
1,189,596	-		CCNA_01084	0.58	-1.8
1,189,692	+		CCNA_01084	0.66	-1.3
1,189,736	-		CCNA_01084	0.70	+0.4
1,189,807	-		CCNA_01084	0.76	+0.5
1,189,813	+		CCNA_01084	0.76	-0.3
1,189,816	-		CCNA_01084	0.76	-1.1
1,189,821	-		CCNA_01084	0.77	+0.2
1,189,862	-		CCNA_01084	0.80	-1.3
1,189,863	+		CCNA_01084	0.80	-0.6
1,189,863	+		CCNA_01084	0.80	-1.6
1,189,871	-		CCNA_01084	0.81	-0.7
1,190,025	+				+1.2
1,190,035	+				+1.1
1,190,122	+				-0.2
1,190,173	-				-0.1
1,190,225	-		CCNA_01085	0.12	-0.4
1,190,238	+		CCNA_01085	0.13	-0.5
1,190,278	+		CCNA_01085	0.17	-1.1
1,190,325	-		CCNA_01085	0.22	-0.6
1,190,325	-		CCNA_01085	0.22	+0.2
1,190,367	-		CCNA_01085	0.26	+0.8
1,190,374	+		CCNA_01085	0.27	-2.1
1,190,382	-		CCNA_01085	0.27	+0.2
1,190,420	+		CCNA_01085	0.31	-0.9
1,190,435	+		CCNA_01085	0.33	-0.5
1,190,494	-		CCNA_01085	0.39	+0.5
1,190,519	+		CCNA_01085	0.41	-1.1
1,190,542	-		CCNA_01085	0.43	+0.1
1,190,580	-		CCNA_01085	0.47	+1.9
1,190,636	-		CCNA_01085	0.53	+0.6
1,190,636	-		CCNA_01085	0.53	+0.6
1,190,646	-		CCNA_01085	0.54	+1.3
1,190,737	-		CCNA_01085	0.63	-0.6
1,190,780	+		CCNA_01085	0.67	-1.0
1,190,831	-		CCNA_01085	0.72	+1.3
1,190,831	-		CCNA_01085	0.72	+0.7
1,190,831	-		CCNA_01085	0.72	+1.9
1,190,958	+		CCNA_01085	0.85	+0.7
1,190,966	-		CCNA_01085	0.85	+1.0
1,191,012	-				+2.0
1,191,082	-				-0.5
1,191,092	+				-0.7
1,191,096	+				+1.7