Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS21255 and BPHYT_RS21260 overlap by 4 nucleotides BPHYT_RS21260 and BPHYT_RS21265 overlap by 1 nucleotides BPHYT_RS21265 and BPHYT_RS21270 are separated by 57 nucleotides
BPHYT_RS21255: BPHYT_RS21255 - spermidine/putrescine ABC transporter ATP-binding protein, at 329,586 to 330,665
_RS21255
BPHYT_RS21260: BPHYT_RS21260 - ABC transporter permease, at 330,662 to 331,540
_RS21260
BPHYT_RS21265: BPHYT_RS21265 - ABC transporter permease, at 331,540 to 332,478
_RS21265
BPHYT_RS21270: BPHYT_RS21270 - dihydroxy-acid dehydratase, at 332,536 to 334,296
_RS21270
Position (kb) 330
331
332 Strain fitness (log2 ratio) -2
-1
0
1
2 at 329.851 kb on + strand, within BPHYT_RS21255 at 329.862 kb on + strand, within BPHYT_RS21255 at 330.177 kb on + strand, within BPHYT_RS21255 at 330.276 kb on + strand, within BPHYT_RS21255 at 330.276 kb on + strand, within BPHYT_RS21255 at 330.458 kb on + strand, within BPHYT_RS21255 at 330.758 kb on + strand, within BPHYT_RS21260 at 330.770 kb on + strand, within BPHYT_RS21260 at 330.771 kb on - strand, within BPHYT_RS21260 at 330.824 kb on + strand, within BPHYT_RS21260 at 331.035 kb on - strand, within BPHYT_RS21260 at 331.086 kb on - strand, within BPHYT_RS21260 at 331.182 kb on - strand, within BPHYT_RS21260 at 331.262 kb on + strand, within BPHYT_RS21260 at 331.263 kb on - strand, within BPHYT_RS21260 at 331.263 kb on - strand, within BPHYT_RS21260 at 331.508 kb on + strand at 331.807 kb on + strand, within BPHYT_RS21265 at 331.808 kb on - strand, within BPHYT_RS21265 at 332.026 kb on + strand, within BPHYT_RS21265 at 332.027 kb on - strand, within BPHYT_RS21265 at 332.027 kb on - strand, within BPHYT_RS21265 at 332.027 kb on - strand, within BPHYT_RS21265 at 332.027 kb on - strand, within BPHYT_RS21265 at 332.191 kb on + strand, within BPHYT_RS21265 at 332.323 kb on + strand, within BPHYT_RS21265 at 332.323 kb on + strand, within BPHYT_RS21265 at 332.324 kb on - strand, within BPHYT_RS21265 at 332.326 kb on + strand, within BPHYT_RS21265 at 332.326 kb on + strand, within BPHYT_RS21265 at 332.326 kb on + strand, within BPHYT_RS21265 at 332.386 kb on + strand at 332.386 kb on + strand at 332.387 kb on - strand at 332.387 kb on - strand at 332.388 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 329,851 + BPHYT_RS21255 0.25 +0.1 329,862 + BPHYT_RS21255 0.26 +0.7 330,177 + BPHYT_RS21255 0.55 -1.4 330,276 + BPHYT_RS21255 0.64 +1.7 330,276 + BPHYT_RS21255 0.64 -1.0 330,458 + BPHYT_RS21255 0.81 -0.6 330,758 + BPHYT_RS21260 0.11 -1.2 330,770 + BPHYT_RS21260 0.12 +0.2 330,771 - BPHYT_RS21260 0.12 +1.0 330,824 + BPHYT_RS21260 0.18 +0.3 331,035 - BPHYT_RS21260 0.42 -0.4 331,086 - BPHYT_RS21260 0.48 +0.0 331,182 - BPHYT_RS21260 0.59 -0.8 331,262 + BPHYT_RS21260 0.68 -0.0 331,263 - BPHYT_RS21260 0.68 -2.1 331,263 - BPHYT_RS21260 0.68 -2.0 331,508 + +1.2 331,807 + BPHYT_RS21265 0.28 +2.5 331,808 - BPHYT_RS21265 0.29 +1.2 332,026 + BPHYT_RS21265 0.52 +0.3 332,027 - BPHYT_RS21265 0.52 -0.5 332,027 - BPHYT_RS21265 0.52 -0.3 332,027 - BPHYT_RS21265 0.52 +0.3 332,027 - BPHYT_RS21265 0.52 +1.4 332,191 + BPHYT_RS21265 0.69 +0.7 332,323 + BPHYT_RS21265 0.83 -0.8 332,323 + BPHYT_RS21265 0.83 +0.4 332,324 - BPHYT_RS21265 0.83 +1.0 332,326 + BPHYT_RS21265 0.84 +0.1 332,326 + BPHYT_RS21265 0.84 +0.0 332,326 + BPHYT_RS21265 0.84 +0.5 332,386 + +0.7 332,386 + -0.1 332,387 - -2.5 332,387 - -0.2 332,388 + +0.3
Or see this region's nucleotide sequence