Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20980

Experiment: nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 10 mM
4,584,341	-				+3.2
4,584,341	-				-0.5
4,584,353	+				+0.1
4,584,353	+				-0.5
4,584,353	+				-0.6
4,584,353	+				-0.2
4,584,353	+				-0.5
4,584,353	+				-0.6
4,584,353	+				+0.8
4,584,353	+				-0.0
4,584,354	-				+0.1
4,584,354	-				+0.8
4,584,354	-				-0.5
4,584,354	-				-1.2
4,584,354	-				+2.5
4,584,354	-				-0.8
4,584,354	-				-1.5
4,584,354	-				-1.0
4,584,354	-				+0.0
4,584,354	-				-0.4
4,584,354	-				-0.5
4,584,357	+				+0.5
4,584,357	+				-0.6
4,584,357	+				+0.8
4,584,357	+				+0.1
4,584,357	+				-0.9
4,584,357	+				+0.8
4,584,357	+				+0.2
4,584,357	+				-0.6
4,584,357	+				-0.2
4,584,357	+				-0.6
4,584,357	+				-1.5
4,584,357	+				-0.8
4,584,357	+				+0.0
4,584,357	+				-1.0
4,584,358	-				-0.2
4,584,358	-				-1.1
4,584,358	-				-1.5
4,584,358	-				+0.9
4,584,358	-				+0.0
4,584,415	+		AO353_20975	0.12	-0.9
4,584,415	+		AO353_20975	0.12	+0.2
4,584,559	+		AO353_20975	0.36	-1.1
4,584,559	+		AO353_20975	0.36	-0.7
4,584,559	+		AO353_20975	0.36	+0.8
4,584,559	+		AO353_20975	0.36	-3.0
4,584,559	+		AO353_20975	0.36	+0.2
4,584,559	+		AO353_20975	0.36	+0.4
4,584,560	-		AO353_20975	0.36	+0.6
4,584,560	-		AO353_20975	0.36	-1.2
4,584,560	-		AO353_20975	0.36	+0.4
4,584,560	-		AO353_20975	0.36	+0.9
4,584,619	-		AO353_20975	0.46	-0.7
4,584,628	+		AO353_20975	0.47	-0.2
4,584,629	-		AO353_20975	0.47	+0.5
4,584,629	-		AO353_20975	0.47	+1.8
4,584,658	+		AO353_20975	0.52	-0.6
4,584,739	-		AO353_20975	0.65	+0.9
4,584,753	+		AO353_20975	0.68	+1.0
4,584,863	-		AO353_20975	0.86	-1.5
4,584,891	+				+0.1
4,584,916	+				-0.1
4,584,916	+				-0.6
4,584,916	+				+0.4
4,584,916	+				-0.0
4,584,916	+				-0.5
4,584,916	+				+0.7
4,584,917	-				+0.4
4,584,917	-				-0.6
4,584,917	-				+0.5
4,584,917	-				+0.9
4,584,917	-				-0.1
4,584,917	-				+0.0
4,584,917	-				+0.1
4,584,917	-				+1.0
4,584,956	+				+1.4
4,584,956	+				+0.7
4,584,956	+				+0.8
4,584,957	-				-0.1
4,584,957	-				+1.0
4,585,025	+				-0.1
4,585,025	+				-0.2
4,585,058	-				+1.1
4,585,097	+				+0.7
4,585,097	+				-0.3
4,585,097	+				-0.5
4,585,097	+				-0.1
4,585,097	+				+0.3
4,585,097	+				-0.3
4,585,098	-				-2.3
4,585,098	-				-1.5
4,585,117	+				+0.4
4,585,117	+				-0.4
4,585,117	+				+0.0
4,585,117	+				-0.2
4,585,117	+				-0.5
4,585,117	+				-1.3
4,585,117	+				+0.9
4,585,117	+				+0.6
4,585,117	+				-1.8
4,585,117	+				-0.6
4,585,117	+				+0.1
4,585,117	+				-0.2
4,585,117	+				-0.2
4,585,117	+				-0.7
4,585,117	+				-0.5
4,585,117	+				+0.5
4,585,117	+				-0.1
4,585,117	+				-0.5
4,585,118	-				-0.8
4,585,118	-				+0.4
4,585,118	-				+0.5
4,585,118	-				+0.2
4,585,118	-				+0.4
4,585,118	-				+0.2
4,585,118	-				-0.1
4,585,118	-				+0.1
4,585,118	-				+0.2
4,585,118	-				-1.1
4,585,118	-				+0.5
4,585,118	-				-0.1
4,585,119	+				+0.9
4,585,120	-				+0.4
4,585,120	-				+0.8
4,585,120	-				+0.1
4,585,120	-				+0.6
4,585,120	-				-0.5
4,585,120	-				-0.6
4,585,120	-				-1.0
4,585,120	-				+0.5
4,585,157	+				-0.1
4,585,157	+				-0.1
4,585,157	+				+0.1
4,585,158	-				+0.4
4,585,158	-				+0.1
4,585,203	+				-0.1
4,585,204	-				+1.1
4,585,204	-				+0.2
4,585,242	-				-0.6
4,585,307	+				-0.7
4,585,307	+				-0.4
4,585,307	+				-0.6
4,585,308	-				-2.0
4,585,308	-				-0.9
4,585,313	+				-1.4
4,585,313	+				-0.1
4,585,313	+				-0.4
4,585,313	+				-1.2
4,585,321	+				-0.2
4,585,373	-		AO353_20980	0.14	-1.2
4,585,373	-		AO353_20980	0.14	-1.5
4,585,379	+		AO353_20980	0.17	-0.6
4,585,379	+		AO353_20980	0.17	+0.1
4,585,380	-		AO353_20980	0.17	-1.6
4,585,457	+		AO353_20980	0.51	-1.1
4,585,472	+		AO353_20980	0.57	-0.1
4,585,473	-		AO353_20980	0.58	-0.9
4,585,552	+				-2.3
4,585,553	-				-1.2
4,585,566	+				-0.8
4,585,566	+				-0.2
4,585,566	+				+0.6
4,585,567	-				+0.4
4,585,677	-				+0.4
4,585,677	-				-1.5
4,585,839	+				+0.8
4,585,839	+				+2.1
4,585,840	-				-0.9
4,585,840	-				-0.3
4,585,877	+				+0.2
4,585,899	+				+0.4
4,585,899	+				-0.6
4,585,899	+				+1.2
4,585,899	+				+1.2
4,585,899	+				-1.2
4,585,899	+				+0.3
4,585,899	+				+0.1
4,585,899	+				+2.4
4,585,899	+				-0.8
4,585,899	+				-0.7
4,585,899	+				-1.6
4,585,899	+				-2.3
4,585,899	+				+0.1
4,585,899	+				-0.4
4,585,899	+				+0.2
4,585,899	+				-1.6
4,585,899	+				+0.5
4,585,899	+				-1.0
4,585,899	+				-1.1
4,585,900	-				+0.2
4,585,900	-				+0.4
4,585,900	-				-1.6
4,585,900	-				-1.4
4,585,900	-				-1.3
4,585,900	-				+0.5
4,585,900	-				+0.7
4,585,900	-				+1.4
4,585,900	-				-1.5
4,585,900	-				+0.4
4,585,900	-				-0.7
4,585,900	-				-1.5
4,585,900	-				-0.2
4,585,900	-				-0.4
4,585,900	-				-0.2
4,585,900	-				-2.0
4,585,900	-				-0.2
4,585,905	+				-0.2
4,585,905	+				-0.1
4,585,905	+				-1.0
4,585,905	+				+1.2
4,585,906	-				-0.1
4,585,906	-				-0.5
4,585,944	+		AO353_20985	0.13	+0.4
4,585,944	+		AO353_20985	0.13	+0.4
4,585,944	+		AO353_20985	0.13	-2.2
4,585,944	+		AO353_20985	0.13	-1.5
4,585,944	+		AO353_20985	0.13	-0.9
4,585,944	+		AO353_20985	0.13	-0.5
4,585,944	+		AO353_20985	0.13	+0.7
4,585,944	+		AO353_20985	0.13	+0.8
4,585,944	+		AO353_20985	0.13	-0.9
4,585,944	+		AO353_20985	0.13	+0.7
4,585,944	+		AO353_20985	0.13	+0.5
4,585,944	+		AO353_20985	0.13	-2.1
4,585,944	+		AO353_20985	0.13	+0.8
4,585,944	+		AO353_20985	0.13	+0.5
4,585,944	+		AO353_20985	0.13	-0.2
4,585,944	+		AO353_20985	0.13	+0.4
4,585,944	+		AO353_20985	0.13	+0.1
4,585,944	+		AO353_20985	0.13	+0.5
4,585,945	-		AO353_20985	0.13	-0.4
4,585,945	-		AO353_20985	0.13	-0.5
4,585,945	-		AO353_20985	0.13	-0.5
4,585,945	-		AO353_20985	0.13	+0.6
4,585,945	-				-1.0
4,585,945	-		AO353_20985	0.13	-0.6
4,585,945	-		AO353_20985	0.13	-0.7
4,585,945	-		AO353_20985	0.13	-1.1
4,585,945	-		AO353_20985	0.13	+1.4
4,585,945	-		AO353_20985	0.13	-0.6
4,585,953	+		AO353_20985	0.14	-0.9
4,585,954	-		AO353_20985	0.14	-0.8
4,585,975	-		AO353_20985	0.15	-0.4
4,586,075	+		AO353_20985	0.23	+0.2
4,586,076	-		AO353_20985	0.23	-1.2
4,586,076	-		AO353_20985	0.23	-0.5
4,586,076	-		AO353_20985	0.23	-0.4
4,586,076	-		AO353_20985	0.23	-0.8
4,586,112	+		AO353_20985	0.26	+0.6
4,586,262	+		AO353_20985	0.38	-0.9
4,586,262	+		AO353_20985	0.38	+0.5
4,586,263	-		AO353_20985	0.38	+0.4
4,586,310	+		AO353_20985	0.42	+1.7
4,586,310	+		AO353_20985	0.42	-0.5
4,586,310	+		AO353_20985	0.42	+0.2
4,586,310	+		AO353_20985	0.42	+0.0
4,586,310	+		AO353_20985	0.42	-0.2
4,586,310	+		AO353_20985	0.42	+0.4
4,586,310	+		AO353_20985	0.42	-1.2
4,586,310	+		AO353_20985	0.42	-0.1
4,586,310	+		AO353_20985	0.42	+0.0
4,586,310	+		AO353_20985	0.42	-1.0
4,586,310	+		AO353_20985	0.42	-0.0
4,586,311	-		AO353_20985	0.42	-1.0
4,586,311	-		AO353_20985	0.42	-1.0
4,586,311	-		AO353_20985	0.42	-0.1
4,586,311	-		AO353_20985	0.42	-1.8
4,586,325	+		AO353_20985	0.43	-0.8
4,586,337	+		AO353_20985	0.44	+1.5
4,586,337	+		AO353_20985	0.44	+0.4
4,586,337	+		AO353_20985	0.44	-0.2
4,586,337	+		AO353_20985	0.44	-0.2
4,586,338	-		AO353_20985	0.44	+0.0
4,586,338	-		AO353_20985	0.44	+0.1
4,586,338	-		AO353_20985	0.44	-0.5
4,586,338	-		AO353_20985	0.44	-0.7
4,586,338	-		AO353_20985	0.44	-0.1
4,586,353	-		AO353_20985	0.45	+0.4
4,586,361	+		AO353_20985	0.46	+0.1
4,586,361	+		AO353_20985	0.46	+0.0
4,586,362	-		AO353_20985	0.46	+0.7
4,586,362	-		AO353_20985	0.46	+1.0
4,586,362	-		AO353_20985	0.46	-1.1
4,586,362	-		AO353_20985	0.46	-1.2
4,586,362	-		AO353_20985	0.46	-2.5
4,586,362	-		AO353_20985	0.46	-0.1
4,586,362	-		AO353_20985	0.46	-0.1
4,586,520	+		AO353_20985	0.58	-1.2
4,586,520	+		AO353_20985	0.58	-0.8