Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19810

Experiment: nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 10 mM
4,355,971	+				-0.2
4,356,121	-		AO353_19805	0.22	+0.9
4,356,121	-		AO353_19805	0.22	-0.7
4,356,121	-		AO353_19805	0.22	-0.9
4,356,137	+		AO353_19805	0.24	-0.4
4,356,137	+		AO353_19805	0.24	-1.7
4,356,137	+		AO353_19805	0.24	-0.2
4,356,137	+		AO353_19805	0.24	-0.8
4,356,138	-		AO353_19805	0.24	+0.2
4,356,138	-		AO353_19805	0.24	-0.0
4,356,138	-		AO353_19805	0.24	-0.0
4,356,157	+		AO353_19805	0.26	-0.1
4,356,157	+		AO353_19805	0.26	-0.8
4,356,157	+		AO353_19805	0.26	-1.6
4,356,391	+		AO353_19805	0.48	+0.8
4,356,391	+		AO353_19805	0.48	-0.2
4,356,391	+		AO353_19805	0.48	-0.2
4,356,391	+		AO353_19805	0.48	-0.8
4,356,391	+		AO353_19805	0.48	-1.8
4,356,391	+		AO353_19805	0.48	+1.4
4,356,392	-		AO353_19805	0.48	+0.4
4,356,392	-		AO353_19805	0.48	-0.8
4,356,805	+		AO353_19805	0.87	-0.2
4,356,910	+				-1.9
4,356,910	+				-0.2
4,356,910	+				+0.6
4,356,910	+				+0.0
4,356,910	+				+0.2
4,356,910	+				+1.4
4,356,910	+				-0.9
4,356,910	+				+0.1
4,356,910	+				-0.2
4,356,910	+				-0.6
4,356,910	+				+0.1
4,356,911	-				+1.7
4,356,911	-				+0.3
4,356,911	-				-1.1
4,356,911	-				+0.3
4,356,911	-				-1.0
4,356,911	-				-0.6
4,356,911	-				+0.2
4,356,911	-				-1.9
4,356,911	-				-0.9
4,356,911	-				-0.2
4,356,943	+				+1.0
4,356,944	-				+1.2
4,356,958	+				-2.0
4,356,968	+		AO353_19810	0.14	-0.7
4,356,969	-		AO353_19810	0.15	-0.0
4,356,969	-		AO353_19810	0.15	-1.4
4,357,042	+		AO353_19810	0.55	-1.6
4,357,042	+		AO353_19810	0.55	-0.2
4,357,042	+		AO353_19810	0.55	-0.8
4,357,042	+		AO353_19810	0.55	-0.5
4,357,124	+				-1.2
4,357,124	+				+0.8
4,357,124	+				-0.2
4,357,124	+				-0.2
4,357,124	+				-0.8
4,357,124	+				+1.1
4,357,124	+				+0.0
4,357,124	+				+0.7
4,357,124	+				+1.1
4,357,124	+				-0.6
4,357,124	+				+0.2
4,357,124	+				-0.9
4,357,124	+				+0.2
4,357,124	+				+0.2
4,357,125	-				-0.0
4,357,125	-				-0.5
4,357,125	-				-0.2
4,357,125	-				-0.3
4,357,125	-				-1.3
4,357,125	-				-0.5
4,357,125	-				+1.4
4,357,125	-				-0.9
4,357,125	-				+1.0
4,357,125	-				+0.4
4,357,125	-				-0.1
4,357,125	-				+1.2
4,357,125	-				-1.3
4,357,125	-				-0.7
4,357,125	-				-0.3
4,357,125	-				-1.0
4,357,125	-				-0.6
4,357,125	-				-0.2
4,357,125	-				-0.4
4,357,125	-				-0.9
4,357,125	-				+0.2
4,357,125	-				+0.8
4,357,128	+				-0.9
4,357,128	+				-0.7
4,357,128	+				+0.2
4,357,128	+				+0.7
4,357,128	+				+0.4
4,357,128	+				-0.1
4,357,128	+				-0.2
4,357,128	+				-1.2
4,357,128	+				+0.4
4,357,128	+				-0.4
4,357,129	-				+0.4
4,357,129	-				-0.8
4,357,129	-				+1.2
4,357,129	-				-0.0
4,357,129	-				-0.5
4,357,129	-				-0.2
4,357,129	-				+0.3
4,357,129	-				+0.4
4,357,129	-				+1.4
4,357,142	+				-0.8
4,357,142	+				-0.8
4,357,142	+				+0.4
4,357,142	+				-0.2
4,357,143	-				-0.3
4,357,150	+				-2.4
4,357,150	+				-0.5
4,357,150	+				+0.2
4,357,151	-				-2.0
4,357,151	-				-2.1
4,357,151	-				-0.3
4,357,151	-				+0.6
4,357,151	-				-1.6
4,357,155	+				+0.6
4,357,155	+				-0.5
4,357,155	+				-2.2
4,357,156	-				-1.0
4,357,287	+		AO353_19815	0.29	-0.5
4,357,287	+		AO353_19815	0.29	-0.2
4,357,369	-		AO353_19815	0.71	+0.0
4,357,370	+		AO353_19815	0.71	+0.9
4,357,370	+		AO353_19815	0.71	+0.7
4,357,370	+		AO353_19815	0.71	-0.5
4,357,370	+		AO353_19815	0.71	+2.0
4,357,370	+		AO353_19815	0.71	+0.6
4,357,370	+		AO353_19815	0.71	+0.8
4,357,370	+		AO353_19815	0.71	-0.2
4,357,371	-		AO353_19815	0.72	-0.6
4,357,371	-		AO353_19815	0.72	+0.4
4,357,371	-		AO353_19815	0.72	-0.6
4,357,386	+		AO353_19815	0.79	-1.9
4,357,386	+		AO353_19815	0.79	+0.6
4,357,396	+		AO353_19815	0.85	+0.6
4,357,396	+		AO353_19815	0.85	-1.0
4,357,396	+		AO353_19815	0.85	-1.0
4,357,397	-		AO353_19815	0.85	-0.2
4,357,397	-		AO353_19815	0.85	+0.6
4,357,397	-		AO353_19815	0.85	-1.1
4,357,397	-		AO353_19815	0.85	+0.2
4,357,426	-				+2.8
4,357,443	+				+0.8
4,357,493	+				+0.7
4,357,493	+				+1.9
4,357,493	+				-1.0
4,357,493	+				-0.8
4,357,493	+				-0.0
4,357,493	+				+0.5
4,357,494	-				-0.3
4,357,494	-				-1.4
4,357,494	-				+0.2
4,357,497	+				+0.3
4,357,497	+				-1.3
4,357,497	+				-0.0
4,357,497	+				+0.3
4,357,497	+				-0.0
4,357,497	+				-1.9
4,357,497	+				-1.4
4,357,497	+				+0.3
4,357,497	+				+0.1
4,357,498	-				-0.3
4,357,498	-				-1.9
4,357,498	-				+1.4
4,357,498	-				-0.7
4,357,498	-				-0.7
4,357,498	-				-0.2
4,357,498	-				+0.4
4,357,553	-				-0.5
4,357,592	+				-2.5
4,357,592	+				-0.9
4,357,593	-				-0.7
4,357,593	-				+0.1
4,357,593	-				+0.3
4,357,593	-				-0.4
4,357,593	-				+1.7
4,357,593	-				-0.6
4,357,593	-				-0.9
4,357,614	+				-1.2
4,357,615	-				-0.6
4,357,658	+				+0.1
4,357,658	+				+0.3
4,357,659	-				-1.2
4,357,659	-				-0.6
4,357,687	+				-1.7
4,357,687	+				+0.9
4,357,687	+				-0.2
4,357,687	+				+0.2
4,357,688	-				-0.2
4,357,688	-				+1.2
4,357,691	-				-1.6
4,357,691	-				-1.5
4,357,705	+				-0.0
4,357,705	+				+0.1
4,357,705	+				+2.0
4,357,706	-				+0.3
4,357,706	-				+1.4
4,357,706	-				-0.2
4,357,706	-				-1.0
4,357,706	-				+0.1
4,357,706	-				-1.0
4,357,706	-				-1.0
4,357,706	-				-0.0
4,357,706	-				-0.5
4,357,729	+		AO353_19820	0.14	+0.6
4,357,729	+		AO353_19820	0.14	-0.4
4,357,729	+		AO353_19820	0.14	+0.6
4,357,729	+		AO353_19820	0.14	-0.8
4,357,730	-		AO353_19820	0.14	+1.2
4,357,730	-		AO353_19820	0.14	-0.4
4,357,750	+		AO353_19820	0.20	-1.2
4,357,750	+		AO353_19820	0.20	-2.4
4,357,750	+		AO353_19820	0.20	-1.5
4,357,750	+		AO353_19820	0.20	-0.8
4,357,750	+		AO353_19820	0.20	-0.5
4,357,750	+		AO353_19820	0.20	-0.5
4,357,750	+		AO353_19820	0.20	-0.2
4,357,751	-		AO353_19820	0.20	-2.3
4,357,751	-		AO353_19820	0.20	-1.2
4,357,751	-		AO353_19820	0.20	+0.3
4,357,751	-		AO353_19820	0.20	+0.7
4,357,751	-		AO353_19820	0.20	+0.7
4,357,751	-		AO353_19820	0.20	-0.9
4,357,751	-		AO353_19820	0.20	-0.1
4,357,751	-		AO353_19820	0.20	-0.1
4,357,751	-		AO353_19820	0.20	-0.1
4,357,751	-		AO353_19820	0.20	-0.4
4,357,751	-		AO353_19820	0.20	+0.9
4,357,771	+		AO353_19820	0.27	+0.4
4,357,771	+		AO353_19820	0.27	+1.7
4,357,771	+		AO353_19820	0.27	-0.4
4,357,771	+		AO353_19820	0.27	+0.1
4,357,772	-		AO353_19820	0.27	+0.1
4,357,772	-		AO353_19820	0.27	-1.0
4,357,772	-		AO353_19820	0.27	+0.6
4,357,792	+		AO353_19820	0.33	-0.2
4,357,792	+		AO353_19820	0.33	+0.2
4,357,793	-		AO353_19820	0.34	+0.2
4,357,793	-		AO353_19820	0.34	-0.6
4,357,793	-		AO353_19820	0.34	+0.8
4,357,809	+		AO353_19820	0.39	+0.6
4,357,809	+		AO353_19820	0.39	+1.9
4,357,809	+		AO353_19820	0.39	+1.0
4,357,809	+		AO353_19820	0.39	+0.3
4,357,809	+		AO353_19820	0.39	-1.5
4,357,810	-		AO353_19820	0.39	-0.4
4,357,810	-		AO353_19820	0.39	-0.3
4,357,810	-		AO353_19820	0.39	+0.4
4,357,810	-		AO353_19820	0.39	-0.4
4,357,813	+		AO353_19820	0.40	-0.9
4,357,813	+		AO353_19820	0.40	-0.9
4,357,814	-		AO353_19820	0.40	-0.6
4,357,814	-		AO353_19820	0.40	-1.1
4,357,814	-		AO353_19820	0.40	-1.0
4,357,861	-		AO353_19820	0.55	+1.4
4,357,921	+		AO353_19820	0.74	+1.8
4,357,921	+		AO353_19820	0.74	+0.6
4,357,921	+		AO353_19820	0.74	-1.4
4,357,922	-		AO353_19820	0.74	-0.9
4,357,922	-		AO353_19820	0.74	+1.4
4,357,922	-		AO353_19820	0.74	+0.8
4,357,922	-		AO353_19820	0.74	+0.9
4,357,922	-		AO353_19820	0.74	+0.2
4,357,924	+		AO353_19820	0.75	+0.4
4,357,924	+		AO353_19820	0.75	-2.0
4,357,924	+		AO353_19820	0.75	-1.0
4,357,924	+		AO353_19820	0.75	-0.2
4,357,925	-		AO353_19820	0.75	-0.6
4,357,925	-		AO353_19820	0.75	-0.4
4,357,925	-		AO353_19820	0.75	-1.2
4,357,925	-		AO353_19820	0.75	-0.4
4,357,925	-		AO353_19820	0.75	+0.7
4,357,925	-		AO353_19820	0.75	-2.2
4,357,925	-		AO353_19820	0.75	-1.5
4,357,925	-		AO353_19820	0.75	+0.3
4,357,925	-		AO353_19820	0.75	+0.0
4,357,925	-		AO353_19820	0.75	+1.4
4,357,925	-		AO353_19820	0.75	-1.0
4,357,925	-		AO353_19820	0.75	-0.5
4,357,925	-		AO353_19820	0.75	+0.0
4,357,925	-		AO353_19820	0.75	-0.1
4,357,927	+		AO353_19820	0.76	-0.0
4,357,927	+		AO353_19820	0.76	-1.7
4,357,927	+		AO353_19820	0.76	-1.6
4,357,928	-		AO353_19820	0.76	+0.2
4,357,928	-		AO353_19820	0.76	+1.4
4,357,928	-		AO353_19820	0.76	+0.1
4,357,980	+				+1.0
4,357,980	+				+0.2
4,357,980	+				+0.6
4,357,981	-				+1.2
4,357,981	-				-1.0
4,357,981	-				-1.8
4,357,981	-				+2.2
4,357,984	-				-1.4
4,357,984	-				-0.8
4,357,984	-				-1.2
4,357,984	-				+0.0
4,358,006	+				-1.2
4,358,006	+				-0.7
4,358,006	+				+0.2
4,358,006	+				-0.7
4,358,007	-				-1.9
4,358,007	-				+0.1
4,358,047	+				-0.2
4,358,047	+				+1.2
4,358,047	+				-2.4
4,358,047	+				+0.2
4,358,047	+				+1.1
4,358,047	+				-0.2
4,358,047	+				+0.1
4,358,047	+				-0.6
4,358,047	+				-0.4
4,358,047	+				-1.2
4,358,047	+				-0.6
4,358,047	+				+0.2
4,358,047	+				+0.3
4,358,047	+				-0.6
4,358,048	-				+0.7
4,358,048	-				-0.1
4,358,048	-				+0.7
4,358,048	-				+0.1
4,358,048	-				-0.2
4,358,072	-				-0.2
4,358,077	+				-1.0
4,358,077	+				-0.3
4,358,077	+				-0.3
4,358,077	+				+0.8
4,358,078	-				+1.6
4,358,116	+				-0.6
4,358,116	+				-0.7
4,358,116	+				+0.8
4,358,116	+				-1.0
4,358,117	-				-0.4
4,358,117	-				-0.2
4,358,117	-				-0.3
4,358,117	-				+0.4
4,358,120	+				-1.6
4,358,120	+				-0.9
4,358,120	+				-0.2
4,358,120	+				-0.9
4,358,120	+				+0.8
4,358,120	+				-0.3
4,358,120	+				-0.5
4,358,121	-				-0.5
4,358,121	-				-1.0
4,358,121	-				-0.8
4,358,121	-				-0.1
4,358,121	-				+1.1
4,358,121	-				-0.8
4,358,121	-				-0.2