Experiment: Sisomicin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18070 and ABZR86_RS18075 are separated by 200 nucleotides ABZR86_RS18075 and ABZR86_RS18080 are separated by 7 nucleotides
ABZR86_RS18070: ABZR86_RS18070 - META and DUF4377 domain-containing protein, at 30,140 to 30,967
_RS18070
ABZR86_RS18075: ABZR86_RS18075 - alpha/beta hydrolase, at 31,168 to 31,857
_RS18075
ABZR86_RS18080: ABZR86_RS18080 - sulfotransferase, at 31,865 to 32,791
_RS18080
Position (kb) 31
32 Strain fitness (log2 ratio) -1
0
1
2 at 30.174 kb on + strand at 30.174 kb on + strand at 30.174 kb on + strand at 30.174 kb on + strand at 30.174 kb on + strand at 30.175 kb on - strand at 30.175 kb on - strand at 30.175 kb on - strand at 30.175 kb on - strand at 30.216 kb on + strand at 30.216 kb on + strand at 30.216 kb on + strand at 30.259 kb on + strand, within ABZR86_RS18070 at 30.259 kb on + strand, within ABZR86_RS18070 at 30.260 kb on - strand, within ABZR86_RS18070 at 30.260 kb on - strand, within ABZR86_RS18070 at 30.260 kb on - strand, within ABZR86_RS18070 at 30.260 kb on - strand, within ABZR86_RS18070 at 30.261 kb on + strand, within ABZR86_RS18070 at 30.261 kb on + strand, within ABZR86_RS18070 at 30.280 kb on - strand, within ABZR86_RS18070 at 30.327 kb on + strand, within ABZR86_RS18070 at 30.328 kb on - strand, within ABZR86_RS18070 at 30.328 kb on - strand, within ABZR86_RS18070 at 30.509 kb on + strand, within ABZR86_RS18070 at 30.978 kb on + strand at 31.059 kb on + strand at 31.120 kb on - strand at 31.335 kb on + strand, within ABZR86_RS18075 at 31.335 kb on + strand, within ABZR86_RS18075 at 31.429 kb on + strand, within ABZR86_RS18075 at 31.429 kb on + strand, within ABZR86_RS18075 at 31.429 kb on + strand, within ABZR86_RS18075 at 31.429 kb on + strand, within ABZR86_RS18075 at 31.429 kb on + strand, within ABZR86_RS18075 at 31.429 kb on + strand, within ABZR86_RS18075 at 31.430 kb on - strand, within ABZR86_RS18075 at 31.558 kb on + strand, within ABZR86_RS18075 at 31.558 kb on + strand, within ABZR86_RS18075 at 31.560 kb on + strand, within ABZR86_RS18075 at 31.650 kb on + strand, within ABZR86_RS18075 at 31.650 kb on + strand, within ABZR86_RS18075 at 31.807 kb on + strand at 31.962 kb on + strand, within ABZR86_RS18080 at 31.962 kb on + strand, within ABZR86_RS18080 at 31.963 kb on - strand, within ABZR86_RS18080 at 31.963 kb on - strand, within ABZR86_RS18080 at 32.206 kb on - strand, within ABZR86_RS18080 at 32.227 kb on - strand, within ABZR86_RS18080 at 32.586 kb on + strand, within ABZR86_RS18080
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.016 mg/ml remove 30,174 + +1.5 30,174 + +0.9 30,174 + -0.1 30,174 + +0.1 30,174 + +0.1 30,175 - -0.2 30,175 - -0.3 30,175 - +0.3 30,175 - -0.3 30,216 + +0.2 30,216 + -0.0 30,216 + +0.4 30,259 + ABZR86_RS18070 0.14 -0.1 30,259 + ABZR86_RS18070 0.14 +0.1 30,260 - ABZR86_RS18070 0.14 +0.7 30,260 - ABZR86_RS18070 0.14 +0.6 30,260 - ABZR86_RS18070 0.14 -0.2 30,260 - ABZR86_RS18070 0.14 -0.3 30,261 + ABZR86_RS18070 0.15 +0.1 30,261 + ABZR86_RS18070 0.15 +0.3 30,280 - ABZR86_RS18070 0.17 -0.0 30,327 + ABZR86_RS18070 0.23 +0.1 30,328 - ABZR86_RS18070 0.23 +0.5 30,328 - ABZR86_RS18070 0.23 +0.2 30,509 + ABZR86_RS18070 0.45 +0.0 30,978 + +0.0 31,059 + -1.0 31,120 - +1.0 31,335 + ABZR86_RS18075 0.24 -0.3 31,335 + ABZR86_RS18075 0.24 -0.5 31,429 + ABZR86_RS18075 0.38 -0.2 31,429 + ABZR86_RS18075 0.38 -0.2 31,429 + ABZR86_RS18075 0.38 -0.6 31,429 + ABZR86_RS18075 0.38 +0.7 31,429 + ABZR86_RS18075 0.38 -1.5 31,429 + ABZR86_RS18075 0.38 -0.2 31,430 - ABZR86_RS18075 0.38 +0.3 31,558 + ABZR86_RS18075 0.57 +0.1 31,558 + ABZR86_RS18075 0.57 +0.3 31,560 + ABZR86_RS18075 0.57 +0.5 31,650 + ABZR86_RS18075 0.70 +0.1 31,650 + ABZR86_RS18075 0.70 -0.1 31,807 + -0.2 31,962 + ABZR86_RS18080 0.10 -0.2 31,962 + ABZR86_RS18080 0.10 -0.2 31,963 - ABZR86_RS18080 0.11 +0.1 31,963 - ABZR86_RS18080 0.11 +0.1 32,206 - ABZR86_RS18080 0.37 -0.2 32,227 - ABZR86_RS18080 0.39 +0.3 32,586 + ABZR86_RS18080 0.78 +1.8
Or see this region's nucleotide sequence