Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS15395

Experiment: Sisomicin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.016 mg/ml
3,460,542	-		ABZR86_RS15385	0.89	-0.7
3,460,647	-				+0.2
3,460,649	+				-0.3
3,460,649	+				+0.2
3,460,649	+				+0.5
3,460,650	-				+0.6
3,460,650	-				+0.2
3,460,708	+				+0.6
3,460,708	+				+1.4
3,460,708	+				+0.6
3,460,708	+				-0.1
3,460,708	+				-0.5
3,460,708	+				+0.1
3,460,708	+				-0.1
3,460,709	-				+0.5
3,460,709	-				+1.0
3,460,709	-				+0.2
3,460,714	+				-0.2
3,460,715	-				-0.5
3,460,789	-				-0.6
3,460,916	+		ABZR86_RS15390	0.27	-0.2
3,460,917	-		ABZR86_RS15390	0.27	-0.1
3,460,917	-		ABZR86_RS15390	0.27	-0.1
3,460,917	-		ABZR86_RS15390	0.27	+0.0
3,460,918	+		ABZR86_RS15390	0.27	-0.0
3,460,918	+		ABZR86_RS15390	0.27	+0.2
3,460,918	+		ABZR86_RS15390	0.27	-0.4
3,460,918	+		ABZR86_RS15390	0.27	+0.4
3,460,918	+		ABZR86_RS15390	0.27	-0.8
3,460,918	+		ABZR86_RS15390	0.27	-1.0
3,460,919	-		ABZR86_RS15390	0.27	-0.5
3,460,919	-		ABZR86_RS15390	0.27	-0.3
3,460,919	-		ABZR86_RS15390	0.27	+0.2
3,460,919	-		ABZR86_RS15390	0.27	+0.2
3,460,919	-		ABZR86_RS15390	0.27	-1.3
3,461,017	+		ABZR86_RS15390	0.40	+0.4
3,461,018	-		ABZR86_RS15390	0.40	-0.2
3,461,101	+		ABZR86_RS15390	0.51	+1.1
3,461,101	+		ABZR86_RS15390	0.51	-0.4
3,461,101	+		ABZR86_RS15390	0.51	+0.9
3,461,102	-		ABZR86_RS15390	0.51	+0.4
3,461,102	-		ABZR86_RS15390	0.51	+0.4
3,461,102	-		ABZR86_RS15390	0.51	-0.5
3,461,102	-		ABZR86_RS15390	0.51	-1.8
3,461,102	-		ABZR86_RS15390	0.51	-0.3
3,461,143	+		ABZR86_RS15390	0.56	+0.4
3,461,143	+		ABZR86_RS15390	0.56	+0.2
3,461,484	-				-0.7
3,461,560	+				-0.4
3,461,560	+				+0.0
3,461,560	+				-0.4
3,461,560	+				-0.0
3,461,560	+				-2.2
3,461,561	-				+0.5
3,461,561	-				-0.8
3,461,561	-				+0.1
3,461,561	-				-0.4
3,461,561	-				-0.5
3,461,561	-				+0.3
3,461,561	-				-0.2
3,461,562	+				+0.2
3,461,563	-				+0.3
3,461,677	+		ABZR86_RS15395	0.13	-0.5
3,461,677	+		ABZR86_RS15395	0.13	-0.5
3,461,678	-		ABZR86_RS15395	0.13	+0.0
3,461,815	+		ABZR86_RS15395	0.22	+0.4
3,461,816	-		ABZR86_RS15395	0.22	+0.6
3,462,400	+		ABZR86_RS15395	0.61	+1.1
3,462,400	+		ABZR86_RS15395	0.61	+0.4
3,462,401	-		ABZR86_RS15395	0.61	-0.8
3,462,404	-		ABZR86_RS15395	0.62	-1.0
3,462,547	+		ABZR86_RS15395	0.71	+0.1
3,462,608	-		ABZR86_RS15395	0.75	+0.3
3,462,620	+		ABZR86_RS15395	0.76	-0.4
3,462,851	-				+0.5
3,462,851	-				-0.5
3,462,867	+				+0.9
3,462,867	+				+0.4
3,462,867	+				+1.6
3,462,867	+				+0.3
3,462,867	+				+0.0
3,462,868	-				+0.1
3,462,868	-				-0.0
3,462,868	-				+0.2
3,462,868	-				+1.3
3,462,924	-				+0.2
3,462,948	+				+0.6
3,462,948	+				+0.4
3,462,948	+				+0.2
3,462,965	+				+0.0
3,462,966	-				+0.2
3,462,966	-				+0.2
3,462,966	-				+0.2
3,463,431	-		ABZR86_RS15400	0.14	-0.6
3,463,471	-		ABZR86_RS15400	0.16	-1.2
3,463,471	-		ABZR86_RS15400	0.16	-0.3
3,463,554	+		ABZR86_RS15400	0.18	+0.1
3,463,555	-		ABZR86_RS15400	0.18	-0.3
3,463,555	-		ABZR86_RS15400	0.18	-0.0
3,463,555	-		ABZR86_RS15400	0.18	-1.4
3,463,692	+		ABZR86_RS15400	0.23	+0.1
3,463,842	+		ABZR86_RS15400	0.27	-0.2
3,463,842	+		ABZR86_RS15400	0.27	+0.1
3,463,875	+		ABZR86_RS15400	0.28	-0.6
3,463,875	+		ABZR86_RS15400	0.28	+0.4
3,463,890	+		ABZR86_RS15400	0.29	+1.0
3,463,890	+		ABZR86_RS15400	0.29	+0.1
3,463,891	-		ABZR86_RS15400	0.29	+0.2
3,463,891	-		ABZR86_RS15400	0.29	+0.6
3,463,908	+		ABZR86_RS15400	0.29	+0.1
3,463,909	-		ABZR86_RS15400	0.29	+0.3