Experiment: Sisomicin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS11765 and ABZR86_RS11770 overlap by 1 nucleotides ABZR86_RS11770 and ABZR86_RS11775 overlap by 8 nucleotides ABZR86_RS11775 and ABZR86_RS11780 overlap by 1 nucleotides
ABZR86_RS11765: ABZR86_RS11765 - VWA domain-containing protein, at 2,638,512 to 2,640,401
_RS11765
ABZR86_RS11770: ABZR86_RS11770 - VWA domain-containing protein, at 2,640,401 to 2,641,387
_RS11770
ABZR86_RS11775: ABZR86_RS11775 - DUF4381 family protein, at 2,641,380 to 2,641,910
_RS11775
ABZR86_RS11780: ABZR86_RS11780 - DUF58 domain-containing protein, at 2,641,910 to 2,642,848
_RS11780
Position (kb)
2640
2641
2642 Strain fitness (log2 ratio)
-2
-1
0
1 at 2639.594 kb on - strand, within ABZR86_RS11765 at 2639.594 kb on - strand, within ABZR86_RS11765 at 2639.733 kb on + strand, within ABZR86_RS11765 at 2639.734 kb on - strand, within ABZR86_RS11765 at 2639.986 kb on + strand, within ABZR86_RS11765 at 2640.074 kb on + strand, within ABZR86_RS11765 at 2640.075 kb on - strand, within ABZR86_RS11765 at 2640.137 kb on - strand, within ABZR86_RS11765 at 2640.328 kb on + strand at 2640.328 kb on + strand at 2640.723 kb on + strand, within ABZR86_RS11770 at 2640.724 kb on - strand, within ABZR86_RS11770 at 2640.724 kb on - strand, within ABZR86_RS11770 at 2640.945 kb on + strand, within ABZR86_RS11770 at 2640.945 kb on + strand, within ABZR86_RS11770 at 2640.946 kb on - strand, within ABZR86_RS11770 at 2640.946 kb on - strand, within ABZR86_RS11770 at 2641.166 kb on + strand, within ABZR86_RS11770 at 2641.167 kb on - strand, within ABZR86_RS11770 at 2641.627 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.694 kb on - strand, within ABZR86_RS11775 at 2641.694 kb on - strand, within ABZR86_RS11775 at 2641.694 kb on - strand, within ABZR86_RS11775 at 2641.694 kb on - strand, within ABZR86_RS11775 at 2641.694 kb on - strand, within ABZR86_RS11775 at 2641.694 kb on - strand, within ABZR86_RS11775 at 2641.694 kb on - strand, within ABZR86_RS11775 at 2641.694 kb on - strand, within ABZR86_RS11775 at 2641.901 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.016 mg/ml remove 2,639,594 - ABZR86_RS11765 0.57 +0.9 2,639,594 - ABZR86_RS11765 0.57 -0.2 2,639,733 + ABZR86_RS11765 0.65 -0.0 2,639,734 - ABZR86_RS11765 0.65 -0.4 2,639,986 + ABZR86_RS11765 0.78 -0.3 2,640,074 + ABZR86_RS11765 0.83 +0.6 2,640,075 - ABZR86_RS11765 0.83 -0.4 2,640,137 - ABZR86_RS11765 0.86 +0.6 2,640,328 + +0.5 2,640,328 + -0.5 2,640,723 + ABZR86_RS11770 0.33 +0.6 2,640,724 - ABZR86_RS11770 0.33 +0.1 2,640,724 - ABZR86_RS11770 0.33 +1.5 2,640,945 + ABZR86_RS11770 0.55 -0.2 2,640,945 + ABZR86_RS11770 0.55 +0.5 2,640,946 - ABZR86_RS11770 0.55 +0.5 2,640,946 - ABZR86_RS11770 0.55 +0.3 2,641,166 + ABZR86_RS11770 0.78 +0.2 2,641,167 - ABZR86_RS11770 0.78 -0.2 2,641,627 + ABZR86_RS11775 0.47 -1.2 2,641,693 + ABZR86_RS11775 0.59 -1.3 2,641,693 + ABZR86_RS11775 0.59 +0.0 2,641,693 + ABZR86_RS11775 0.59 -0.1 2,641,693 + ABZR86_RS11775 0.59 +0.0 2,641,693 + ABZR86_RS11775 0.59 -0.4 2,641,693 + ABZR86_RS11775 0.59 -0.7 2,641,693 + ABZR86_RS11775 0.59 -0.3 2,641,693 + ABZR86_RS11775 0.59 +0.2 2,641,693 + ABZR86_RS11775 0.59 +0.4 2,641,693 + ABZR86_RS11775 0.59 +1.0 2,641,694 - ABZR86_RS11775 0.59 -0.9 2,641,694 - ABZR86_RS11775 0.59 +0.5 2,641,694 - ABZR86_RS11775 0.59 -0.1 2,641,694 - ABZR86_RS11775 0.59 +0.4 2,641,694 - ABZR86_RS11775 0.59 +0.3 2,641,694 - ABZR86_RS11775 0.59 +0.0 2,641,694 - ABZR86_RS11775 0.59 -2.0 2,641,694 - ABZR86_RS11775 0.59 +0.5 2,641,901 + -0.2
Or see this region's nucleotide sequence