Experiment: Sisomicin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS11020 and ABZR86_RS11025 are separated by 13 nucleotides ABZR86_RS11025 and ABZR86_RS11030 are separated by 404 nucleotides
ABZR86_RS11020: ABZR86_RS11020 - succinate--CoA ligase subunit alpha, at 2,447,391 to 2,448,266
_RS11020
ABZR86_RS11025: ABZR86_RS11025 - ADP-forming succinate--CoA ligase subunit beta, at 2,448,280 to 2,449,440
_RS11025
ABZR86_RS11030: ABZR86_RS11030 - HAMP domain-containing sensor histidine kinase, at 2,449,845 to 2,451,491
_RS11030
Position (kb)
2448
2449
2450 Strain fitness (log2 ratio)
-1
0
1 at 2447.392 kb on + strand at 2447.392 kb on + strand at 2447.392 kb on + strand at 2447.392 kb on + strand at 2447.392 kb on + strand at 2447.392 kb on + strand at 2447.392 kb on + strand at 2447.393 kb on - strand at 2447.393 kb on - strand at 2449.446 kb on - strand at 2449.601 kb on - strand at 2449.601 kb on - strand at 2449.643 kb on - strand at 2449.643 kb on - strand at 2449.643 kb on - strand at 2449.643 kb on - strand at 2449.643 kb on - strand at 2449.643 kb on - strand at 2449.643 kb on - strand at 2449.768 kb on + strand at 2449.804 kb on + strand at 2449.804 kb on + strand at 2449.804 kb on + strand at 2449.804 kb on + strand at 2449.805 kb on - strand at 2449.805 kb on - strand at 2449.805 kb on - strand at 2449.805 kb on - strand at 2449.805 kb on - strand at 2449.805 kb on - strand at 2449.805 kb on - strand at 2449.806 kb on + strand at 2449.806 kb on + strand at 2449.807 kb on - strand at 2449.807 kb on - strand at 2449.807 kb on - strand at 2449.807 kb on - strand at 2449.853 kb on + strand at 2449.926 kb on + strand at 2449.927 kb on - strand at 2449.953 kb on + strand at 2449.953 kb on + strand at 2449.954 kb on - strand at 2450.266 kb on + strand, within ABZR86_RS11030 at 2450.266 kb on + strand, within ABZR86_RS11030 at 2450.267 kb on - strand, within ABZR86_RS11030 at 2450.267 kb on - strand, within ABZR86_RS11030 at 2450.267 kb on - strand, within ABZR86_RS11030 at 2450.358 kb on + strand, within ABZR86_RS11030 at 2450.359 kb on - strand, within ABZR86_RS11030 at 2450.359 kb on - strand, within ABZR86_RS11030 at 2450.359 kb on - strand, within ABZR86_RS11030 at 2450.359 kb on - strand, within ABZR86_RS11030 at 2450.382 kb on + strand, within ABZR86_RS11030 at 2450.382 kb on + strand, within ABZR86_RS11030 at 2450.382 kb on + strand, within ABZR86_RS11030 at 2450.382 kb on + strand, within ABZR86_RS11030 at 2450.382 kb on + strand, within ABZR86_RS11030 at 2450.382 kb on + strand, within ABZR86_RS11030 at 2450.383 kb on - strand, within ABZR86_RS11030 at 2450.383 kb on - strand, within ABZR86_RS11030
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.016 mg/ml remove 2,447,392 + -0.3 2,447,392 + +1.0 2,447,392 + +1.4 2,447,392 + +0.5 2,447,392 + +1.4 2,447,392 + +1.0 2,447,392 + +1.5 2,447,393 - +1.0 2,447,393 - +1.4 2,449,446 - +0.2 2,449,601 - +0.2 2,449,601 - +0.5 2,449,643 - +0.2 2,449,643 - -0.2 2,449,643 - -0.6 2,449,643 - +0.7 2,449,643 - +0.1 2,449,643 - -0.1 2,449,643 - +0.1 2,449,768 + -0.2 2,449,804 + -1.2 2,449,804 + -0.4 2,449,804 + +0.1 2,449,804 + -0.0 2,449,805 - -0.5 2,449,805 - -0.5 2,449,805 - -0.1 2,449,805 - -0.2 2,449,805 - +1.2 2,449,805 - +0.2 2,449,805 - -0.5 2,449,806 + -0.4 2,449,806 + +0.0 2,449,807 - -0.7 2,449,807 - +0.4 2,449,807 - +0.3 2,449,807 - -1.7 2,449,853 + -0.8 2,449,926 + -0.0 2,449,927 - +0.3 2,449,953 + -0.3 2,449,953 + -0.2 2,449,954 - +0.1 2,450,266 + ABZR86_RS11030 0.26 +0.0 2,450,266 + ABZR86_RS11030 0.26 +0.9 2,450,267 - ABZR86_RS11030 0.26 -1.0 2,450,267 - ABZR86_RS11030 0.26 +0.4 2,450,267 - ABZR86_RS11030 0.26 -0.0 2,450,358 + ABZR86_RS11030 0.31 -0.2 2,450,359 - ABZR86_RS11030 0.31 -0.2 2,450,359 - ABZR86_RS11030 0.31 +0.1 2,450,359 - ABZR86_RS11030 0.31 +0.6 2,450,359 - ABZR86_RS11030 0.31 +0.6 2,450,382 + ABZR86_RS11030 0.33 +0.2 2,450,382 + ABZR86_RS11030 0.33 +0.2 2,450,382 + ABZR86_RS11030 0.33 +0.5 2,450,382 + ABZR86_RS11030 0.33 -0.3 2,450,382 + ABZR86_RS11030 0.33 +0.3 2,450,382 + ABZR86_RS11030 0.33 +0.4 2,450,383 - ABZR86_RS11030 0.33 +0.5 2,450,383 - ABZR86_RS11030 0.33 +0.1
Or see this region's nucleotide sequence