Experiment: Sisomicin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS04050 and ABZR86_RS04055 are separated by 121 nucleotides ABZR86_RS04055 and ABZR86_RS04060 are separated by 54 nucleotides
ABZR86_RS04050: ABZR86_RS04050 - DMT family transporter, at 891,423 to 892,286
_RS04050
ABZR86_RS04055: ABZR86_RS04055 - PLP-dependent aminotransferase family protein, at 892,408 to 893,799
_RS04055
ABZR86_RS04060: ABZR86_RS04060 - M13 family metallopeptidase, at 893,854 to 895,899
_RS04060
Position (kb) 892
893
894 Strain fitness (log2 ratio) -2
-1
0
1
2 at 891.424 kb on + strand at 891.433 kb on + strand at 891.434 kb on - strand at 891.434 kb on - strand at 891.434 kb on - strand at 891.477 kb on + strand at 891.478 kb on - strand at 891.478 kb on - strand at 891.575 kb on + strand, within ABZR86_RS04050 at 891.575 kb on + strand, within ABZR86_RS04050 at 891.640 kb on + strand, within ABZR86_RS04050 at 891.640 kb on + strand, within ABZR86_RS04050 at 891.640 kb on + strand, within ABZR86_RS04050 at 891.640 kb on + strand, within ABZR86_RS04050 at 891.641 kb on - strand, within ABZR86_RS04050 at 891.641 kb on - strand, within ABZR86_RS04050 at 891.877 kb on + strand, within ABZR86_RS04050 at 891.877 kb on + strand, within ABZR86_RS04050 at 891.878 kb on - strand, within ABZR86_RS04050 at 891.968 kb on + strand, within ABZR86_RS04050 at 891.968 kb on + strand, within ABZR86_RS04050 at 891.969 kb on - strand, within ABZR86_RS04050 at 892.251 kb on - strand at 892.376 kb on - strand at 892.477 kb on + strand at 892.478 kb on - strand at 892.558 kb on + strand, within ABZR86_RS04055 at 892.559 kb on - strand, within ABZR86_RS04055 at 892.559 kb on - strand, within ABZR86_RS04055 at 892.612 kb on + strand, within ABZR86_RS04055 at 892.612 kb on + strand, within ABZR86_RS04055 at 892.612 kb on + strand, within ABZR86_RS04055 at 892.612 kb on + strand, within ABZR86_RS04055 at 892.612 kb on + strand, within ABZR86_RS04055 at 892.613 kb on - strand, within ABZR86_RS04055 at 892.724 kb on + strand, within ABZR86_RS04055 at 892.724 kb on + strand, within ABZR86_RS04055 at 892.725 kb on - strand, within ABZR86_RS04055 at 892.765 kb on + strand, within ABZR86_RS04055 at 892.765 kb on + strand, within ABZR86_RS04055 at 892.765 kb on + strand, within ABZR86_RS04055 at 892.765 kb on + strand, within ABZR86_RS04055 at 892.831 kb on + strand, within ABZR86_RS04055 at 892.832 kb on - strand, within ABZR86_RS04055 at 892.867 kb on + strand, within ABZR86_RS04055 at 892.867 kb on + strand, within ABZR86_RS04055 at 892.867 kb on + strand, within ABZR86_RS04055 at 893.089 kb on - strand, within ABZR86_RS04055 at 893.134 kb on + strand, within ABZR86_RS04055 at 893.134 kb on + strand, within ABZR86_RS04055 at 893.135 kb on - strand, within ABZR86_RS04055 at 893.320 kb on - strand, within ABZR86_RS04055 at 893.365 kb on + strand, within ABZR86_RS04055 at 893.365 kb on + strand, within ABZR86_RS04055 at 893.365 kb on + strand, within ABZR86_RS04055 at 893.366 kb on - strand, within ABZR86_RS04055 at 893.366 kb on - strand, within ABZR86_RS04055 at 893.366 kb on - strand, within ABZR86_RS04055 at 893.366 kb on - strand, within ABZR86_RS04055 at 893.367 kb on + strand, within ABZR86_RS04055 at 893.368 kb on - strand, within ABZR86_RS04055 at 893.797 kb on + strand at 893.798 kb on - strand at 893.814 kb on + strand at 893.815 kb on - strand at 893.860 kb on + strand at 893.860 kb on + strand at 893.861 kb on - strand at 893.861 kb on - strand at 893.935 kb on + strand at 894.073 kb on - strand, within ABZR86_RS04060 at 894.074 kb on + strand, within ABZR86_RS04060 at 894.074 kb on + strand, within ABZR86_RS04060 at 894.137 kb on + strand, within ABZR86_RS04060 at 894.137 kb on + strand, within ABZR86_RS04060 at 894.231 kb on - strand, within ABZR86_RS04060 at 894.231 kb on - strand, within ABZR86_RS04060 at 894.231 kb on - strand, within ABZR86_RS04060 at 894.231 kb on - strand, within ABZR86_RS04060 at 894.392 kb on + strand, within ABZR86_RS04060 at 894.393 kb on - strand, within ABZR86_RS04060 at 894.419 kb on + strand, within ABZR86_RS04060 at 894.593 kb on + strand, within ABZR86_RS04060 at 894.596 kb on + strand, within ABZR86_RS04060
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.016 mg/ml remove 891,424 + -0.1 891,433 + -0.4 891,434 - -0.9 891,434 - -0.5 891,434 - +0.4 891,477 + -0.1 891,478 - +0.2 891,478 - +0.7 891,575 + ABZR86_RS04050 0.18 -0.7 891,575 + ABZR86_RS04050 0.18 -0.1 891,640 + ABZR86_RS04050 0.25 +0.9 891,640 + ABZR86_RS04050 0.25 -0.8 891,640 + ABZR86_RS04050 0.25 +1.1 891,640 + ABZR86_RS04050 0.25 -1.1 891,641 - ABZR86_RS04050 0.25 -0.3 891,641 - ABZR86_RS04050 0.25 +0.9 891,877 + ABZR86_RS04050 0.53 -1.2 891,877 + ABZR86_RS04050 0.53 -0.6 891,878 - ABZR86_RS04050 0.53 +1.9 891,968 + ABZR86_RS04050 0.63 -0.5 891,968 + ABZR86_RS04050 0.63 -1.1 891,969 - ABZR86_RS04050 0.63 -0.2 892,251 - -0.5 892,376 - -0.5 892,477 + +0.2 892,478 - +0.2 892,558 + ABZR86_RS04055 0.11 -0.6 892,559 - ABZR86_RS04055 0.11 -1.6 892,559 - ABZR86_RS04055 0.11 -0.5 892,612 + ABZR86_RS04055 0.15 -0.6 892,612 + ABZR86_RS04055 0.15 +0.4 892,612 + ABZR86_RS04055 0.15 +0.5 892,612 + ABZR86_RS04055 0.15 +0.3 892,612 + ABZR86_RS04055 0.15 +0.6 892,613 - ABZR86_RS04055 0.15 -0.8 892,724 + ABZR86_RS04055 0.23 -0.1 892,724 + ABZR86_RS04055 0.23 +1.9 892,725 - ABZR86_RS04055 0.23 +0.7 892,765 + ABZR86_RS04055 0.26 +0.5 892,765 + ABZR86_RS04055 0.26 +1.0 892,765 + ABZR86_RS04055 0.26 -0.8 892,765 + ABZR86_RS04055 0.26 -1.6 892,831 + ABZR86_RS04055 0.30 -0.6 892,832 - ABZR86_RS04055 0.30 -1.0 892,867 + ABZR86_RS04055 0.33 -0.2 892,867 + ABZR86_RS04055 0.33 +0.2 892,867 + ABZR86_RS04055 0.33 +0.1 893,089 - ABZR86_RS04055 0.49 +0.7 893,134 + ABZR86_RS04055 0.52 -1.9 893,134 + ABZR86_RS04055 0.52 -0.5 893,135 - ABZR86_RS04055 0.52 +0.5 893,320 - ABZR86_RS04055 0.66 -0.1 893,365 + ABZR86_RS04055 0.69 -0.0 893,365 + ABZR86_RS04055 0.69 +1.9 893,365 + ABZR86_RS04055 0.69 +0.6 893,366 - ABZR86_RS04055 0.69 +0.9 893,366 - ABZR86_RS04055 0.69 +0.1 893,366 - ABZR86_RS04055 0.69 -0.4 893,366 - ABZR86_RS04055 0.69 -0.2 893,367 + ABZR86_RS04055 0.69 -0.3 893,368 - ABZR86_RS04055 0.69 +0.0 893,797 + -0.2 893,798 - -0.6 893,814 + -0.6 893,815 - +0.4 893,860 + +1.7 893,860 + -0.4 893,861 - +0.1 893,861 - -0.3 893,935 + -0.1 894,073 - ABZR86_RS04060 0.11 +0.1 894,074 + ABZR86_RS04060 0.11 -0.4 894,074 + ABZR86_RS04060 0.11 +0.2 894,137 + ABZR86_RS04060 0.14 -0.6 894,137 + ABZR86_RS04060 0.14 -0.3 894,231 - ABZR86_RS04060 0.18 +0.4 894,231 - ABZR86_RS04060 0.18 -0.7 894,231 - ABZR86_RS04060 0.18 +0.6 894,231 - ABZR86_RS04060 0.18 -0.1 894,392 + ABZR86_RS04060 0.26 +1.5 894,393 - ABZR86_RS04060 0.26 +0.2 894,419 + ABZR86_RS04060 0.28 +0.0 894,593 + ABZR86_RS04060 0.36 +0.8 894,596 + ABZR86_RS04060 0.36 +0.3
Or see this region's nucleotide sequence