Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS03535

Experiment: Sisomicin 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS03530 and ABZR86_RS03535 are separated by 301 nucleotidesABZR86_RS03535 and ABZR86_RS03540 are separated by 3 nucleotides ABZR86_RS03530: ABZR86_RS03530 - cytochrome c, at 755,244 to 756,569 _RS03530 ABZR86_RS03535: ABZR86_RS03535 - GTP 3',8-cyclase MoaA, at 756,871 to 757,854 _RS03535 ABZR86_RS03540: ABZR86_RS03540 - bifunctional molybdenum cofactor biosynthesis protein MoaC/MoaB, at 757,858 to 758,859 _RS03540 Position (kb) 756 757 758Strain fitness (log2 ratio) -1 0 1at 755.907 kb on + strand, within ABZR86_RS03530at 755.907 kb on + strand, within ABZR86_RS03530at 755.907 kb on + strand, within ABZR86_RS03530at 755.907 kb on + strand, within ABZR86_RS03530at 755.907 kb on + strand, within ABZR86_RS03530at 755.907 kb on + strand, within ABZR86_RS03530at 755.907 kb on + strand, within ABZR86_RS03530at 755.908 kb on - strand, within ABZR86_RS03530at 755.908 kb on - strand, within ABZR86_RS03530at 755.908 kb on - strand, within ABZR86_RS03530at 755.908 kb on - strand, within ABZR86_RS03530at 755.908 kb on - strand, within ABZR86_RS03530at 755.908 kb on - strand, within ABZR86_RS03530at 755.908 kb on - strand, within ABZR86_RS03530at 755.908 kb on - strand, within ABZR86_RS03530at 755.944 kb on + strand, within ABZR86_RS03530at 755.944 kb on + strand, within ABZR86_RS03530at 755.945 kb on - strand, within ABZR86_RS03530at 755.964 kb on + strand, within ABZR86_RS03530at 755.964 kb on + strand, within ABZR86_RS03530at 755.964 kb on + strand, within ABZR86_RS03530at 755.964 kb on + strand, within ABZR86_RS03530at 755.964 kb on + strand, within ABZR86_RS03530at 755.965 kb on - strand, within ABZR86_RS03530at 755.965 kb on - strand, within ABZR86_RS03530at 755.965 kb on - strand, within ABZR86_RS03530at 755.966 kb on + strand, within ABZR86_RS03530at 755.966 kb on + strand, within ABZR86_RS03530at 755.966 kb on + strand, within ABZR86_RS03530at 755.967 kb on - strand, within ABZR86_RS03530at 755.967 kb on - strand, within ABZR86_RS03530at 755.967 kb on - strand, within ABZR86_RS03530at 755.988 kb on + strand, within ABZR86_RS03530at 755.988 kb on + strand, within ABZR86_RS03530at 755.988 kb on + strand, within ABZR86_RS03530at 755.988 kb on + strand, within ABZR86_RS03530at 755.988 kb on + strand, within ABZR86_RS03530at 755.988 kb on + strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 756.027 kb on + strand, within ABZR86_RS03530at 756.027 kb on + strand, within ABZR86_RS03530at 756.028 kb on - strand, within ABZR86_RS03530at 756.028 kb on - strand, within ABZR86_RS03530at 756.093 kb on + strand, within ABZR86_RS03530at 756.093 kb on + strand, within ABZR86_RS03530at 756.093 kb on + strand, within ABZR86_RS03530at 756.093 kb on + strand, within ABZR86_RS03530at 756.094 kb on - strand, within ABZR86_RS03530at 756.094 kb on - strand, within ABZR86_RS03530at 756.094 kb on - strand, within ABZR86_RS03530at 756.105 kb on + strand, within ABZR86_RS03530at 756.105 kb on + strand, within ABZR86_RS03530at 756.105 kb on + strand, within ABZR86_RS03530at 756.106 kb on - strand, within ABZR86_RS03530at 756.106 kb on - strand, within ABZR86_RS03530at 756.106 kb on - strand, within ABZR86_RS03530at 756.141 kb on + strand, within ABZR86_RS03530at 756.141 kb on + strand, within ABZR86_RS03530at 756.141 kb on + strand, within ABZR86_RS03530at 756.142 kb on - strand, within ABZR86_RS03530at 756.142 kb on - strand, within ABZR86_RS03530at 756.142 kb on - strand, within ABZR86_RS03530at 756.462 kb on + strandat 756.462 kb on + strandat 756.462 kb on + strandat 756.463 kb on - strandat 756.463 kb on - strandat 756.463 kb on - strandat 756.463 kb on - strandat 756.463 kb on - strandat 756.463 kb on - strandat 756.463 kb on - strandat 756.465 kb on - strandat 756.567 kb on + strandat 756.567 kb on + strandat 756.567 kb on + strandat 756.568 kb on - strandat 756.568 kb on - strandat 756.568 kb on - strandat 756.568 kb on - strandat 756.568 kb on - strandat 756.723 kb on + strandat 756.723 kb on + strandat 756.724 kb on - strandat 756.724 kb on - strandat 756.724 kb on - strandat 756.772 kb on + strandat 756.772 kb on + strandat 756.772 kb on + strandat 756.789 kb on - strandat 756.893 kb on - strandat 756.893 kb on - strandat 756.910 kb on + strandat 756.910 kb on + strandat 756.955 kb on + strandat 756.955 kb on + strandat 756.955 kb on + strandat 756.955 kb on + strandat 756.955 kb on + strandat 756.956 kb on - strandat 756.956 kb on - strandat 756.956 kb on - strandat 756.956 kb on - strandat 757.402 kb on + strand, within ABZR86_RS03535at 757.403 kb on - strand, within ABZR86_RS03535at 757.894 kb on - strandat 757.969 kb on + strand, within ABZR86_RS03540at 758.095 kb on + strand, within ABZR86_RS03540at 758.095 kb on + strand, within ABZR86_RS03540at 758.095 kb on + strand, within ABZR86_RS03540at 758.095 kb on + strand, within ABZR86_RS03540at 758.096 kb on - strand, within ABZR86_RS03540at 758.096 kb on - strand, within ABZR86_RS03540at 758.147 kb on - strand, within ABZR86_RS03540at 758.147 kb on - strand, within ABZR86_RS03540at 758.227 kb on + strand, within ABZR86_RS03540at 758.227 kb on + strand, within ABZR86_RS03540at 758.228 kb on - strand, within ABZR86_RS03540at 758.228 kb on - strand, within ABZR86_RS03540at 758.228 kb on - strand, within ABZR86_RS03540at 758.272 kb on - strand, within ABZR86_RS03540at 758.434 kb on + strand, within ABZR86_RS03540at 758.566 kb on - strand, within ABZR86_RS03540

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Per-strain Table

Position Strand Gene LocusTag Fraction Sisomicin 0.016 mg/ml
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755,907 + ABZR86_RS03530 0.50 +0.1
755,907 + ABZR86_RS03530 0.50 -0.2
755,907 + ABZR86_RS03530 0.50 -0.4
755,907 + ABZR86_RS03530 0.50 +1.3
755,907 + ABZR86_RS03530 0.50 -1.0
755,907 + ABZR86_RS03530 0.50 +0.4
755,907 + ABZR86_RS03530 0.50 +0.4
755,908 - ABZR86_RS03530 0.50 +0.0
755,908 - ABZR86_RS03530 0.50 -0.0
755,908 - ABZR86_RS03530 0.50 -0.1
755,908 - ABZR86_RS03530 0.50 +0.3
755,908 - ABZR86_RS03530 0.50 +0.2
755,908 - ABZR86_RS03530 0.50 +0.4
755,908 - ABZR86_RS03530 0.50 -0.2
755,908 - ABZR86_RS03530 0.50 -0.6
755,944 + ABZR86_RS03530 0.53 -0.2
755,944 + ABZR86_RS03530 0.53 -0.3
755,945 - ABZR86_RS03530 0.53 -0.2
755,964 + ABZR86_RS03530 0.54 -0.2
755,964 + ABZR86_RS03530 0.54 -0.2
755,964 + ABZR86_RS03530 0.54 -0.6
755,964 + ABZR86_RS03530 0.54 -0.1
755,964 + ABZR86_RS03530 0.54 +0.0
755,965 - ABZR86_RS03530 0.54 +0.0
755,965 - ABZR86_RS03530 0.54 -1.1
755,965 - ABZR86_RS03530 0.54 -0.4
755,966 + ABZR86_RS03530 0.54 +0.1
755,966 + ABZR86_RS03530 0.54 -0.9
755,966 + ABZR86_RS03530 0.54 -1.1
755,967 - ABZR86_RS03530 0.55 -0.2
755,967 - ABZR86_RS03530 0.55 -0.3
755,967 - ABZR86_RS03530 0.55 +0.4
755,988 + ABZR86_RS03530 0.56 +0.5
755,988 + ABZR86_RS03530 0.56 -0.4
755,988 + ABZR86_RS03530 0.56 -0.2
755,988 + ABZR86_RS03530 0.56 +0.3
755,988 + ABZR86_RS03530 0.56 -0.0
755,988 + ABZR86_RS03530 0.56 +0.7
755,989 - ABZR86_RS03530 0.56 -0.5
755,989 - ABZR86_RS03530 0.56 -0.2
755,989 - ABZR86_RS03530 0.56 -0.3
755,989 - ABZR86_RS03530 0.56 +0.4
755,989 - ABZR86_RS03530 0.56 +0.0
755,989 - ABZR86_RS03530 0.56 -0.9
755,989 - ABZR86_RS03530 0.56 -0.6
755,989 - ABZR86_RS03530 0.56 -1.0
755,989 - ABZR86_RS03530 0.56 -0.0
756,027 + ABZR86_RS03530 0.59 -0.1
756,027 + ABZR86_RS03530 0.59 -1.0
756,028 - ABZR86_RS03530 0.59 +0.2
756,028 - ABZR86_RS03530 0.59 +0.5
756,093 + ABZR86_RS03530 0.64 +0.1
756,093 + ABZR86_RS03530 0.64 +0.4
756,093 + ABZR86_RS03530 0.64 -0.4
756,093 + ABZR86_RS03530 0.64 -0.7
756,094 - ABZR86_RS03530 0.64 +0.1
756,094 - ABZR86_RS03530 0.64 -0.1
756,094 - ABZR86_RS03530 0.64 +0.4
756,105 + ABZR86_RS03530 0.65 -1.0
756,105 + ABZR86_RS03530 0.65 -0.5
756,105 + ABZR86_RS03530 0.65 +0.1
756,106 - ABZR86_RS03530 0.65 -0.4
756,106 - ABZR86_RS03530 0.65 +0.1
756,106 - ABZR86_RS03530 0.65 +0.6
756,141 + ABZR86_RS03530 0.68 -0.4
756,141 + ABZR86_RS03530 0.68 +0.1
756,141 + ABZR86_RS03530 0.68 -0.4
756,142 - ABZR86_RS03530 0.68 +0.1
756,142 - ABZR86_RS03530 0.68 -0.3
756,142 - ABZR86_RS03530 0.68 -1.4
756,462 + +0.2
756,462 + +0.1
756,462 + +0.1
756,463 - -0.0
756,463 - +0.1
756,463 - -0.6
756,463 - -0.3
756,463 - -0.7
756,463 - -0.3
756,463 - +0.1
756,465 - -0.3
756,567 + +0.2
756,567 + +0.1
756,567 + -0.6
756,568 - +0.1
756,568 - -0.1
756,568 - +1.1
756,568 - +0.0
756,568 - -0.5
756,723 + +0.5
756,723 + +0.2
756,724 - +0.3
756,724 - -0.2
756,724 - +0.8
756,772 + +0.0
756,772 + -1.1
756,772 + -0.2
756,789 - -1.5
756,893 - -0.6
756,893 - -0.4
756,910 + +1.2
756,910 + +0.4
756,955 + +0.3
756,955 + +0.4
756,955 + +0.0
756,955 + +0.0
756,955 + +0.8
756,956 - -1.0
756,956 - +0.6
756,956 - +0.3
756,956 - +0.1
757,402 + ABZR86_RS03535 0.54 +0.2
757,403 - ABZR86_RS03535 0.54 +0.1
757,894 - -0.1
757,969 + ABZR86_RS03540 0.11 -0.4
758,095 + ABZR86_RS03540 0.24 +0.7
758,095 + ABZR86_RS03540 0.24 +0.5
758,095 + ABZR86_RS03540 0.24 +0.3
758,095 + ABZR86_RS03540 0.24 +0.8
758,096 - ABZR86_RS03540 0.24 +0.3
758,096 - ABZR86_RS03540 0.24 +0.1
758,147 - ABZR86_RS03540 0.29 -0.0
758,147 - ABZR86_RS03540 0.29 +0.3
758,227 + ABZR86_RS03540 0.37 -0.1
758,227 + ABZR86_RS03540 0.37 +0.3
758,228 - ABZR86_RS03540 0.37 +0.4
758,228 - ABZR86_RS03540 0.37 +0.8
758,228 - ABZR86_RS03540 0.37 +0.7
758,272 - ABZR86_RS03540 0.41 +0.2
758,434 + ABZR86_RS03540 0.57 -0.1
758,566 - ABZR86_RS03540 0.71 +0.5

Or see this region's nucleotide sequence