Experiment: Sisomicin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01075 and ABZR86_RS01080 are separated by 70 nucleotides ABZR86_RS01080 and ABZR86_RS01085 are separated by 77 nucleotides ABZR86_RS01085 and ABZR86_RS01090 are separated by 198 nucleotides ABZR86_RS01090 and ABZR86_RS01095 are separated by 207 nucleotides
ABZR86_RS01075: ABZR86_RS01075 - hypothetical protein, at 214,612 to 214,956
_RS01075
ABZR86_RS01080: ABZR86_RS01080 - hypothetical protein, at 215,027 to 215,227
_RS01080
ABZR86_RS01085: ABZR86_RS01085 - GlsB/YeaQ/YmgE family stress response membrane protein, at 215,305 to 215,556
_RS01085
ABZR86_RS01090: ABZR86_RS01090 - enoyl-ACP reductase FabV, at 215,755 to 216,954
_RS01090
ABZR86_RS01095: ABZR86_RS01095 - elongation factor G, at 217,162 to 219,327
_RS01095
Position (kb) 215
216
217 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 214.952 kb on - strand at 215.028 kb on + strand at 215.028 kb on + strand at 215.029 kb on - strand at 215.050 kb on + strand, within ABZR86_RS01080 at 215.051 kb on - strand, within ABZR86_RS01080 at 215.051 kb on - strand, within ABZR86_RS01080 at 215.591 kb on + strand at 215.591 kb on + strand at 215.592 kb on - strand at 215.621 kb on + strand at 215.621 kb on + strand at 215.621 kb on + strand at 215.621 kb on + strand at 215.621 kb on + strand at 215.622 kb on - strand at 215.622 kb on - strand at 215.622 kb on - strand at 215.622 kb on - strand at 216.995 kb on + strand at 216.996 kb on - strand at 217.003 kb on + strand at 217.004 kb on - strand at 217.004 kb on - strand at 217.004 kb on - strand at 217.004 kb on - strand at 217.020 kb on + strand at 217.030 kb on + strand at 217.031 kb on - strand at 217.031 kb on - strand at 217.031 kb on - strand at 217.096 kb on + strand at 217.096 kb on + strand at 217.111 kb on + strand at 217.112 kb on - strand at 217.125 kb on - strand at 217.125 kb on - strand at 217.161 kb on + strand at 217.162 kb on - strand at 217.162 kb on - strand at 217.190 kb on - strand at 217.255 kb on + strand at 217.255 kb on + strand at 217.256 kb on - strand at 217.256 kb on - strand at 217.256 kb on - strand at 217.256 kb on - strand at 217.258 kb on + strand at 217.258 kb on + strand at 217.258 kb on + strand at 217.259 kb on - strand at 217.259 kb on - strand at 217.259 kb on - strand at 217.259 kb on - strand at 217.259 kb on - strand at 217.259 kb on - strand at 217.259 kb on - strand at 217.330 kb on + strand at 217.330 kb on + strand at 217.330 kb on + strand at 217.458 kb on + strand, within ABZR86_RS01095 at 217.458 kb on + strand, within ABZR86_RS01095 at 217.459 kb on - strand, within ABZR86_RS01095 at 217.459 kb on - strand, within ABZR86_RS01095 at 217.552 kb on + strand, within ABZR86_RS01095 at 217.553 kb on - strand, within ABZR86_RS01095 at 217.553 kb on - strand, within ABZR86_RS01095 at 217.573 kb on + strand, within ABZR86_RS01095 at 217.573 kb on + strand, within ABZR86_RS01095 at 217.573 kb on + strand, within ABZR86_RS01095 at 217.573 kb on + strand, within ABZR86_RS01095 at 217.573 kb on + strand, within ABZR86_RS01095 at 217.574 kb on - strand, within ABZR86_RS01095 at 217.574 kb on - strand, within ABZR86_RS01095 at 217.574 kb on - strand, within ABZR86_RS01095 at 217.574 kb on - strand, within ABZR86_RS01095 at 217.574 kb on - strand, within ABZR86_RS01095 at 217.574 kb on - strand, within ABZR86_RS01095 at 217.574 kb on - strand, within ABZR86_RS01095 at 217.609 kb on - strand, within ABZR86_RS01095 at 217.726 kb on + strand, within ABZR86_RS01095 at 217.727 kb on - strand, within ABZR86_RS01095
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.016 mg/ml remove 214,952 - -0.0 215,028 + +0.7 215,028 + -0.1 215,029 - +1.1 215,050 + ABZR86_RS01080 0.11 +0.7 215,051 - ABZR86_RS01080 0.12 -0.0 215,051 - ABZR86_RS01080 0.12 +0.2 215,591 + +0.3 215,591 + -0.3 215,592 - -0.3 215,621 + +0.3 215,621 + +0.0 215,621 + -0.7 215,621 + +0.5 215,621 + -0.0 215,622 - +0.2 215,622 - +0.4 215,622 - +0.5 215,622 - -0.3 216,995 + -0.0 216,996 - -0.2 217,003 + -1.1 217,004 - +0.2 217,004 - +1.5 217,004 - +0.2 217,004 - +0.2 217,020 + -1.0 217,030 + +0.7 217,031 - +0.1 217,031 - +0.5 217,031 - +0.3 217,096 + -0.6 217,096 + -0.9 217,111 + -0.1 217,112 - +2.2 217,125 - +1.6 217,125 - +2.7 217,161 + +3.1 217,162 - +3.0 217,162 - +3.1 217,190 - +2.9 217,255 + +2.8 217,255 + +3.9 217,256 - +3.0 217,256 - +3.2 217,256 - +2.5 217,256 - +3.0 217,258 + +2.8 217,258 + +3.0 217,258 + +3.0 217,259 - +2.9 217,259 - +1.9 217,259 - +2.8 217,259 - +2.6 217,259 - +2.5 217,259 - +2.7 217,259 - +2.7 217,330 + +3.1 217,330 + +3.2 217,330 + +3.0 217,458 + ABZR86_RS01095 0.14 +2.8 217,458 + ABZR86_RS01095 0.14 +2.9 217,459 - ABZR86_RS01095 0.14 +3.0 217,459 - ABZR86_RS01095 0.14 +2.8 217,552 + ABZR86_RS01095 0.18 +3.2 217,553 - ABZR86_RS01095 0.18 +2.9 217,553 - ABZR86_RS01095 0.18 +2.9 217,573 + ABZR86_RS01095 0.19 +3.0 217,573 + ABZR86_RS01095 0.19 +3.8 217,573 + ABZR86_RS01095 0.19 +3.3 217,573 + ABZR86_RS01095 0.19 +2.6 217,573 + ABZR86_RS01095 0.19 +2.6 217,574 - ABZR86_RS01095 0.19 +3.0 217,574 - ABZR86_RS01095 0.19 +2.9 217,574 - ABZR86_RS01095 0.19 +2.8 217,574 - ABZR86_RS01095 0.19 +2.9 217,574 - ABZR86_RS01095 0.19 +2.8 217,574 - ABZR86_RS01095 0.19 +2.1 217,574 - ABZR86_RS01095 0.19 +1.9 217,609 - ABZR86_RS01095 0.21 +2.8 217,726 + ABZR86_RS01095 0.26 +2.8 217,727 - ABZR86_RS01095 0.26 +2.3
Or see this region's nucleotide sequence