Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS00570

Experiment: Sisomicin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.016 mg/ml
106,935	-		ABZR86_RS00565	0.29	-0.2
107,057	+		ABZR86_RS00565	0.45	+0.5
107,285	+		ABZR86_RS00565	0.73	-0.0
107,306	+		ABZR86_RS00565	0.76	+0.3
107,306	+		ABZR86_RS00565	0.76	-0.3
107,307	-		ABZR86_RS00565	0.76	+0.3
107,307	-		ABZR86_RS00565	0.76	+1.0
107,307	-		ABZR86_RS00565	0.76	+0.2
107,307	-		ABZR86_RS00565	0.76	+1.0
107,307	-		ABZR86_RS00565	0.76	+0.4
107,502	+				+0.2
107,503	-				+0.5
107,633	+				-0.5
107,634	-				+0.4
107,669	+				+0.3
107,670	-				-0.1
107,670	-				-0.3
107,670	-				+0.9
107,712	+				-0.5
107,712	+				-0.4
107,712	+				-0.1
107,712	+				+0.4
107,713	-				+1.0
107,713	-				-0.0
107,713	-				+0.3
107,713	-				-0.5
107,713	-				-0.3
107,713	-				-0.5
107,724	+				-2.6
107,724	+				-1.6
107,724	+				-1.3
107,724	+				-2.7
107,724	+				-1.0
107,724	+				-2.0
107,724	+				-1.2
107,724	+				-1.1
107,724	+				-2.2
107,724	+				-0.8
107,724	+				+0.1
107,725	-				-1.4
107,725	-				-2.1
107,725	-				-3.2
107,725	-				-1.8
107,725	-				-1.2
107,725	-				-1.9
107,725	-				-1.2
107,725	-				-2.5
107,997	+		ABZR86_RS00570	0.39	-2.0
108,013	-		ABZR86_RS00570	0.41	-3.0
108,150	+		ABZR86_RS00570	0.59	-2.5
108,151	-		ABZR86_RS00570	0.59	-1.5
108,151	-		ABZR86_RS00570	0.59	-2.5
108,352	-		ABZR86_RS00570	0.87	-2.0
108,388	-				-3.4
108,457	+				-2.9
108,457	+				-2.1
108,457	+				-2.6
108,458	-				-0.7
108,458	-				-2.0
108,458	-				-1.2
108,465	+				-0.7
108,466	-				+0.9
108,466	-				+0.4
108,466	-				+1.0
108,466	-				+0.3
108,542	-				-0.1
108,595	+				-0.5
108,596	-				+1.3
108,596	-				+0.1
108,597	+				-1.0
108,597	+				-0.1
108,605	+				+1.3
108,856	+		ABZR86_RS00575	0.26	-0.5
108,857	-		ABZR86_RS00575	0.27	-0.5
108,985	+		ABZR86_RS00575	0.41	-1.0
108,986	-		ABZR86_RS00575	0.41	-1.7
108,991	+		ABZR86_RS00575	0.42	-0.8
108,992	-		ABZR86_RS00575	0.42	-2.7
108,992	-		ABZR86_RS00575	0.42	-2.7
108,992	-		ABZR86_RS00575	0.42	-0.5
108,992	-		ABZR86_RS00575	0.42	-0.6
108,992	-		ABZR86_RS00575	0.42	+0.2
108,992	-		ABZR86_RS00575	0.42	-1.0
109,250	-		ABZR86_RS00575	0.72	+0.9