Experiment: Sisomicin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00500 and ABZR86_RS00505 are separated by 28 nucleotides ABZR86_RS00505 and ABZR86_RS00510 are separated by 151 nucleotides ABZR86_RS00510 and ABZR86_RS00515 are separated by 120 nucleotides
ABZR86_RS00500: ABZR86_RS00500 - NAD(P)/FAD-dependent oxidoreductase, at 96,340 to 97,527
_RS00500
ABZR86_RS00505: ABZR86_RS00505 - phospholipase A, at 97,556 to 98,626
_RS00505
ABZR86_RS00510: ABZR86_RS00510 - hypothetical protein, at 98,778 to 99,236
_RS00510
ABZR86_RS00515: ABZR86_RS00515 - crosslink repair DNA glycosylase YcaQ family protein, at 99,357 to 100,670
_RS00515
Position (kb) 97
98
99 Strain fitness (log2 ratio) -1
0
1
2 at 96.607 kb on + strand, within ABZR86_RS00500 at 96.608 kb on - strand, within ABZR86_RS00500 at 96.682 kb on + strand, within ABZR86_RS00500 at 96.682 kb on + strand, within ABZR86_RS00500 at 96.682 kb on + strand, within ABZR86_RS00500 at 96.683 kb on - strand, within ABZR86_RS00500 at 96.683 kb on - strand, within ABZR86_RS00500 at 96.683 kb on - strand, within ABZR86_RS00500 at 96.683 kb on - strand, within ABZR86_RS00500 at 96.706 kb on - strand, within ABZR86_RS00500 at 96.865 kb on + strand, within ABZR86_RS00500 at 96.865 kb on + strand, within ABZR86_RS00500 at 96.937 kb on + strand, within ABZR86_RS00500 at 96.938 kb on - strand, within ABZR86_RS00500 at 96.938 kb on - strand, within ABZR86_RS00500 at 97.132 kb on - strand, within ABZR86_RS00500 at 97.366 kb on + strand, within ABZR86_RS00500 at 97.366 kb on + strand, within ABZR86_RS00500 at 97.367 kb on - strand, within ABZR86_RS00500 at 97.593 kb on + strand at 97.593 kb on + strand at 97.594 kb on - strand at 97.612 kb on - strand at 97.612 kb on - strand at 97.612 kb on - strand at 97.653 kb on + strand at 97.653 kb on + strand at 97.653 kb on + strand at 97.653 kb on + strand at 97.654 kb on - strand at 97.654 kb on - strand at 97.654 kb on - strand at 97.654 kb on - strand at 97.803 kb on + strand, within ABZR86_RS00505 at 97.803 kb on + strand, within ABZR86_RS00505 at 97.803 kb on + strand, within ABZR86_RS00505 at 97.804 kb on - strand, within ABZR86_RS00505 at 97.804 kb on - strand, within ABZR86_RS00505 at 98.007 kb on + strand, within ABZR86_RS00505 at 98.007 kb on + strand, within ABZR86_RS00505 at 98.007 kb on + strand, within ABZR86_RS00505 at 98.007 kb on + strand, within ABZR86_RS00505 at 98.008 kb on - strand, within ABZR86_RS00505 at 98.043 kb on + strand, within ABZR86_RS00505 at 98.044 kb on - strand, within ABZR86_RS00505 at 98.082 kb on + strand, within ABZR86_RS00505 at 98.082 kb on + strand, within ABZR86_RS00505 at 98.082 kb on + strand, within ABZR86_RS00505 at 98.083 kb on - strand, within ABZR86_RS00505 at 98.107 kb on + strand, within ABZR86_RS00505 at 98.109 kb on + strand, within ABZR86_RS00505 at 98.109 kb on + strand, within ABZR86_RS00505 at 98.109 kb on + strand, within ABZR86_RS00505 at 98.110 kb on - strand, within ABZR86_RS00505 at 98.142 kb on - strand, within ABZR86_RS00505 at 98.287 kb on - strand, within ABZR86_RS00505 at 98.287 kb on - strand, within ABZR86_RS00505 at 98.287 kb on - strand, within ABZR86_RS00505 at 98.508 kb on + strand, within ABZR86_RS00505 at 98.508 kb on + strand, within ABZR86_RS00505 at 98.509 kb on - strand, within ABZR86_RS00505 at 98.509 kb on - strand, within ABZR86_RS00505 at 98.509 kb on - strand, within ABZR86_RS00505 at 98.652 kb on + strand at 98.817 kb on + strand at 98.817 kb on + strand at 98.817 kb on + strand at 98.817 kb on + strand at 98.818 kb on - strand at 98.818 kb on - strand at 98.818 kb on - strand at 98.818 kb on - strand at 98.818 kb on - strand at 98.818 kb on - strand at 98.818 kb on - strand at 98.896 kb on + strand, within ABZR86_RS00510 at 98.896 kb on + strand, within ABZR86_RS00510 at 98.896 kb on + strand, within ABZR86_RS00510 at 98.896 kb on + strand, within ABZR86_RS00510 at 98.896 kb on + strand, within ABZR86_RS00510 at 98.896 kb on + strand, within ABZR86_RS00510 at 98.896 kb on + strand, within ABZR86_RS00510 at 98.896 kb on + strand, within ABZR86_RS00510 at 98.896 kb on + strand, within ABZR86_RS00510 at 98.897 kb on - strand, within ABZR86_RS00510 at 98.897 kb on - strand, within ABZR86_RS00510 at 98.897 kb on - strand, within ABZR86_RS00510 at 98.897 kb on - strand, within ABZR86_RS00510 at 98.897 kb on - strand, within ABZR86_RS00510 at 98.998 kb on + strand, within ABZR86_RS00510 at 98.999 kb on - strand, within ABZR86_RS00510 at 98.999 kb on - strand, within ABZR86_RS00510 at 99.354 kb on + strand at 99.355 kb on - strand at 99.589 kb on - strand, within ABZR86_RS00515
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.016 mg/ml remove 96,607 + ABZR86_RS00500 0.22 -0.5 96,608 - ABZR86_RS00500 0.23 +0.2 96,682 + ABZR86_RS00500 0.29 -0.4 96,682 + ABZR86_RS00500 0.29 +0.4 96,682 + ABZR86_RS00500 0.29 +0.4 96,683 - ABZR86_RS00500 0.29 +0.7 96,683 - ABZR86_RS00500 0.29 -0.1 96,683 - ABZR86_RS00500 0.29 -0.8 96,683 - ABZR86_RS00500 0.29 -0.0 96,706 - ABZR86_RS00500 0.31 +0.7 96,865 + ABZR86_RS00500 0.44 -0.0 96,865 + ABZR86_RS00500 0.44 -0.2 96,937 + ABZR86_RS00500 0.50 +0.1 96,938 - ABZR86_RS00500 0.50 -1.4 96,938 - ABZR86_RS00500 0.50 -0.1 97,132 - ABZR86_RS00500 0.67 -0.4 97,366 + ABZR86_RS00500 0.86 +1.2 97,366 + ABZR86_RS00500 0.86 +0.0 97,367 - ABZR86_RS00500 0.86 -0.1 97,593 + +0.1 97,593 + +1.6 97,594 - +1.2 97,612 - +0.9 97,612 - +0.6 97,612 - +1.0 97,653 + +1.1 97,653 + +0.7 97,653 + +0.4 97,653 + +1.0 97,654 - +0.9 97,654 - +1.0 97,654 - +1.5 97,654 - +1.1 97,803 + ABZR86_RS00505 0.23 +0.7 97,803 + ABZR86_RS00505 0.23 +1.1 97,803 + ABZR86_RS00505 0.23 +1.2 97,804 - ABZR86_RS00505 0.23 +0.9 97,804 - ABZR86_RS00505 0.23 +1.2 98,007 + ABZR86_RS00505 0.42 +1.0 98,007 + ABZR86_RS00505 0.42 +1.0 98,007 + ABZR86_RS00505 0.42 +1.1 98,007 + ABZR86_RS00505 0.42 +0.6 98,008 - ABZR86_RS00505 0.42 +0.8 98,043 + ABZR86_RS00505 0.45 +1.6 98,044 - ABZR86_RS00505 0.46 +1.1 98,082 + ABZR86_RS00505 0.49 +0.2 98,082 + ABZR86_RS00505 0.49 +1.5 98,082 + ABZR86_RS00505 0.49 +1.1 98,083 - ABZR86_RS00505 0.49 +0.7 98,107 + ABZR86_RS00505 0.51 +2.6 98,109 + ABZR86_RS00505 0.52 +0.6 98,109 + ABZR86_RS00505 0.52 +0.5 98,109 + ABZR86_RS00505 0.52 +0.4 98,110 - ABZR86_RS00505 0.52 +0.6 98,142 - ABZR86_RS00505 0.55 +0.5 98,287 - ABZR86_RS00505 0.68 +0.3 98,287 - ABZR86_RS00505 0.68 +0.3 98,287 - ABZR86_RS00505 0.68 +1.1 98,508 + ABZR86_RS00505 0.89 +0.8 98,508 + ABZR86_RS00505 0.89 +1.5 98,509 - ABZR86_RS00505 0.89 +1.0 98,509 - ABZR86_RS00505 0.89 +1.1 98,509 - ABZR86_RS00505 0.89 +1.3 98,652 + +0.7 98,817 + -0.4 98,817 + -0.2 98,817 + +0.1 98,817 + -0.6 98,818 - +0.8 98,818 - +0.2 98,818 - -0.2 98,818 - +1.7 98,818 - -1.4 98,818 - -0.1 98,818 - +0.1 98,896 + ABZR86_RS00510 0.26 +0.2 98,896 + ABZR86_RS00510 0.26 -0.4 98,896 + ABZR86_RS00510 0.26 -0.5 98,896 + ABZR86_RS00510 0.26 -0.3 98,896 + ABZR86_RS00510 0.26 -1.2 98,896 + ABZR86_RS00510 0.26 -0.2 98,896 + ABZR86_RS00510 0.26 -0.0 98,896 + ABZR86_RS00510 0.26 -0.5 98,896 + ABZR86_RS00510 0.26 -1.4 98,897 - ABZR86_RS00510 0.26 +0.3 98,897 - ABZR86_RS00510 0.26 -0.4 98,897 - ABZR86_RS00510 0.26 +1.8 98,897 - ABZR86_RS00510 0.26 +0.5 98,897 - ABZR86_RS00510 0.26 -1.2 98,998 + ABZR86_RS00510 0.48 +0.3 98,999 - ABZR86_RS00510 0.48 +0.0 98,999 - ABZR86_RS00510 0.48 -0.5 99,354 + -0.5 99,355 - -0.7 99,589 - ABZR86_RS00515 0.18 +0.1
Or see this region's nucleotide sequence