Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2294

Experiment: Ceftazidime 0.15 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.15 mg/ml
2,714,188	+		Pf6N2E2_2293	0.62	+0.4
2,714,189	-		Pf6N2E2_2293	0.62	+0.1
2,714,204	+		Pf6N2E2_2293	0.63	-1.0
2,714,204	+		Pf6N2E2_2293	0.63	+1.1
2,714,660	-		Pf6N2E2_2293	0.87	+2.0
2,714,863	-				-0.2
2,714,992	-				-0.8
2,715,056	-				-2.3
2,715,060	+				+0.5
2,715,061	-				-2.3
2,715,070	+				+1.0
2,715,106	-				-2.2
2,715,106	-				-3.3
2,715,146	+				-1.2
2,715,147	-				-0.3
2,715,162	-				-3.4
2,715,198	+				-3.1
2,715,217	+				-3.1
2,715,221	-				-2.6
2,715,221	-				-1.1
2,715,265	+				-2.9
2,715,265	+				-2.6
2,715,310	+				-4.3
2,715,310	+				-4.3
2,715,310	+				-2.4
2,715,319	+		Pf6N2E2_2294	0.10	-2.3
2,715,472	+		Pf6N2E2_2294	0.18	-2.0
2,715,472	+		Pf6N2E2_2294	0.18	-2.0
2,715,472	+		Pf6N2E2_2294	0.18	-2.9
2,715,473	-		Pf6N2E2_2294	0.18	-1.9
2,715,473	-		Pf6N2E2_2294	0.18	+0.7
2,715,473	-		Pf6N2E2_2294	0.18	-3.1
2,715,473	-		Pf6N2E2_2294	0.18	-1.5
2,715,473	-		Pf6N2E2_2294	0.18	-1.4
2,715,473	-		Pf6N2E2_2294	0.18	-3.3
2,715,476	-		Pf6N2E2_2294	0.18	-0.7
2,715,476	-		Pf6N2E2_2294	0.18	-2.9
2,715,556	+		Pf6N2E2_2294	0.23	-3.4
2,715,557	-		Pf6N2E2_2294	0.23	-2.4
2,715,626	+		Pf6N2E2_2294	0.26	-0.3
2,715,627	-		Pf6N2E2_2294	0.26	-2.7
2,715,700	+		Pf6N2E2_2294	0.30	-2.0
2,715,700	+		Pf6N2E2_2294	0.30	-1.9
2,715,701	-		Pf6N2E2_2294	0.30	-4.1
2,716,018	+		Pf6N2E2_2294	0.47	-1.4
2,716,019	-		Pf6N2E2_2294	0.47	-3.3
2,716,019	-		Pf6N2E2_2294	0.47	-1.3
2,716,167	+		Pf6N2E2_2294	0.54	-2.0
2,716,213	+		Pf6N2E2_2294	0.57	-2.9
2,716,214	-		Pf6N2E2_2294	0.57	-1.0
2,716,214	-		Pf6N2E2_2294	0.57	-1.3
2,716,214	-		Pf6N2E2_2294	0.57	-3.6
2,716,214	-		Pf6N2E2_2294	0.57	-3.3
2,716,214	-		Pf6N2E2_2294	0.57	-0.3
2,716,243	+		Pf6N2E2_2294	0.58	-3.0
2,716,279	+		Pf6N2E2_2294	0.60	-1.3
2,716,408	+		Pf6N2E2_2294	0.67	-3.6
2,716,409	-		Pf6N2E2_2294	0.67	-4.3
2,716,466	-		Pf6N2E2_2294	0.70	-2.0
2,716,466	-		Pf6N2E2_2294	0.70	-2.3
2,716,480	+		Pf6N2E2_2294	0.70	-1.9
2,716,480	+		Pf6N2E2_2294	0.70	-2.0
2,716,481	-		Pf6N2E2_2294	0.71	-2.1
2,716,516	+		Pf6N2E2_2294	0.72	-2.3
2,716,516	+		Pf6N2E2_2294	0.72	-0.9
2,716,517	-		Pf6N2E2_2294	0.72	-2.3
2,716,517	-		Pf6N2E2_2294	0.72	-3.1
2,716,517	-		Pf6N2E2_2294	0.72	-2.1
2,716,517	-		Pf6N2E2_2294	0.72	-1.5
2,716,517	-		Pf6N2E2_2294	0.72	-1.3
2,716,949	-				-3.0
2,716,949	-				-2.6
2,716,949	-				-0.7
2,716,949	-				-2.3
2,716,970	-				-3.3
2,716,981	+				-2.1
2,716,981	+				-2.3
2,716,982	-				-2.8
2,716,982	-				-2.1
2,716,982	-				-2.3
2,716,982	-				-3.3
2,717,032	+				+0.4
2,717,032	+				-0.4
2,717,032	+				+0.9
2,717,122	+				-0.6
2,717,223	+				+0.0
2,717,223	+				+0.4
2,717,224	-				-0.3
2,717,626	+		Pf6N2E2_2295	0.26	+0.5
2,717,627	-		Pf6N2E2_2295	0.26	+0.1
2,717,627	-		Pf6N2E2_2295	0.26	-0.1
2,717,627	-		Pf6N2E2_2295	0.26	+0.3
2,717,627	-		Pf6N2E2_2295	0.26	-0.4
2,717,627	-		Pf6N2E2_2295	0.26	+0.5
2,717,757	+		Pf6N2E2_2295	0.33	+0.1
2,717,757	+		Pf6N2E2_2295	0.33	+0.5
2,717,758	-		Pf6N2E2_2295	0.33	+0.7
2,717,758	-		Pf6N2E2_2295	0.33	+0.3
2,717,758	-		Pf6N2E2_2295	0.33	+0.2
2,717,758	-		Pf6N2E2_2295	0.33	+1.7
2,717,758	-		Pf6N2E2_2295	0.33	+1.1
2,717,758	-		Pf6N2E2_2295	0.33	+0.5
2,717,758	-		Pf6N2E2_2295	0.33	-0.0
2,717,758	-		Pf6N2E2_2295	0.33	-1.0
2,717,778	+		Pf6N2E2_2295	0.34	-0.3
2,717,778	+		Pf6N2E2_2295	0.34	+0.2
2,717,778	+		Pf6N2E2_2295	0.34	+0.3
2,717,778	+		Pf6N2E2_2295	0.34	-0.6
2,717,778	+		Pf6N2E2_2295	0.34	+1.0
2,717,778	+		Pf6N2E2_2295	0.34	-1.1
2,717,779	-		Pf6N2E2_2295	0.34	-0.7
2,717,779	-		Pf6N2E2_2295	0.34	+0.1
2,717,779	-		Pf6N2E2_2295	0.34	-0.5
2,717,865	+		Pf6N2E2_2295	0.39	+0.7
2,717,865	+		Pf6N2E2_2295	0.39	+0.1
2,717,866	-		Pf6N2E2_2295	0.39	+0.9
2,717,988	-		Pf6N2E2_2295	0.46	+0.8