Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2144

Experiment: Ceftazidime 0.15 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.15 mg/ml
2,549,326	+		Pf6N2E2_2143	0.17	+0.4
2,549,326	+		Pf6N2E2_2143	0.17	+0.4
2,549,327	-		Pf6N2E2_2143	0.17	+2.3
2,549,535	+		Pf6N2E2_2143	0.50	+0.2
2,549,535	+		Pf6N2E2_2143	0.50	-0.3
2,549,553	+		Pf6N2E2_2143	0.53	+0.1
2,549,553	+		Pf6N2E2_2143	0.53	-0.9
2,549,844	+				+1.0
2,549,845	-				+0.7
2,549,854	+				+0.5
2,549,854	+				-2.3
2,549,855	-				-0.1
2,549,855	-				+0.9
2,549,855	-				-1.1
2,549,855	-				-0.2
2,549,855	-				+0.1
2,549,855	-				+1.2
2,549,855	-				+0.1
2,549,872	+				-1.3
2,549,873	-				+0.0
2,549,873	-				+1.1
2,549,938	-				+1.3
2,549,938	-				-0.9
2,549,938	-				+1.0
2,550,080	+		Pf6N2E2_2144	0.17	-0.4
2,550,095	+		Pf6N2E2_2144	0.20	-0.8
2,550,095	+		Pf6N2E2_2144	0.20	-1.3
2,550,095	+		Pf6N2E2_2144	0.20	-1.1
2,550,095	+		Pf6N2E2_2144	0.20	+0.3
2,550,095	+		Pf6N2E2_2144	0.20	-0.5
2,550,096	-		Pf6N2E2_2144	0.20	-0.7
2,550,552	-				-0.3
2,550,723	+				+0.2
2,550,946	+		Pf6N2E2_2145	0.16	+0.5
2,550,946	+		Pf6N2E2_2145	0.16	+0.4
2,550,947	-		Pf6N2E2_2145	0.16	-0.1
2,550,947	-		Pf6N2E2_2145	0.16	-0.7
2,551,122	+		Pf6N2E2_2145	0.32	+0.7
2,551,123	-		Pf6N2E2_2145	0.32	-0.5
2,551,193	-		Pf6N2E2_2145	0.39	+0.1
2,551,207	+		Pf6N2E2_2145	0.40	-0.2
2,551,207	+		Pf6N2E2_2145	0.40	-1.9
2,551,207	+		Pf6N2E2_2145	0.40	+1.3
2,551,208	-		Pf6N2E2_2145	0.40	+0.4
2,551,208	-		Pf6N2E2_2145	0.40	-0.0
2,551,247	-		Pf6N2E2_2145	0.43	+0.1
2,551,247	-		Pf6N2E2_2145	0.43	-0.3
2,551,306	+		Pf6N2E2_2145	0.49	+1.9
2,551,306	+		Pf6N2E2_2145	0.49	-0.9
2,551,307	-		Pf6N2E2_2145	0.49	+1.3
2,551,477	+		Pf6N2E2_2145	0.64	+0.7