Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1319

Experiment: Ceftazidime 0.15 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.15 mg/ml
1,552,717	+		Pf6N2E2_1318	0.39	+0.1
1,552,969	+		Pf6N2E2_1318	0.59	+1.1
1,553,041	+		Pf6N2E2_1318	0.64	-0.2
1,553,041	+		Pf6N2E2_1318	0.64	-0.4
1,553,042	-		Pf6N2E2_1318	0.65	-0.5
1,553,042	-		Pf6N2E2_1318	0.65	+1.5
1,553,069	-		Pf6N2E2_1318	0.67	+0.5
1,553,069	-		Pf6N2E2_1318	0.67	-0.4
1,553,519	+				-1.1
1,553,519	+				-0.5
1,553,519	+				-0.5
1,553,519	+				-0.5
1,553,519	+				+0.3
1,553,520	-				-0.5
1,553,520	-				+0.0
1,553,520	-				+1.4
1,553,520	-				-1.1
1,553,520	-				+1.6
1,553,520	-				-0.0
1,553,839	-		Pf6N2E2_1319	0.42	-0.1
1,553,874	+		Pf6N2E2_1319	0.52	-0.7
1,553,874	+		Pf6N2E2_1319	0.52	-0.5
1,553,874	+		Pf6N2E2_1319	0.52	-0.7
1,553,952	+		Pf6N2E2_1319	0.73	+0.1
1,554,033	+				+0.4
1,554,033	+				-0.3
1,554,153	-				+0.7
1,554,187	-		Pf6N2E2_1320	0.13	-0.5
1,554,187	-		Pf6N2E2_1320	0.13	+0.9
1,554,258	+		Pf6N2E2_1320	0.24	-0.4
1,554,258	+		Pf6N2E2_1320	0.24	+0.6
1,554,271	-		Pf6N2E2_1320	0.26	-0.3
1,554,379	-		Pf6N2E2_1320	0.42	-0.5
1,554,716	-				-0.4
1,554,779	-				-0.5
1,554,838	+				-2.1
1,554,839	-				+0.1
1,554,839	-				+1.8