Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05932 and H281DRAFT_05933 are separated by 105 nucleotides H281DRAFT_05933 and H281DRAFT_05934 are separated by 127 nucleotides
H281DRAFT_05932: H281DRAFT_05932 - MFS transporter, DHA2 family, multidrug resistance protein, at 69,332 to 70,918
_05932
H281DRAFT_05933: H281DRAFT_05933 - L-glutaminase, at 71,024 to 71,938
_05933
H281DRAFT_05934: H281DRAFT_05934 - Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains, at 72,066 to 72,935
_05934
Position (kb) 71
72 Strain fitness (log2 ratio) -1
0
1 at 70.220 kb on + strand, within H281DRAFT_05932 at 70.220 kb on + strand, within H281DRAFT_05932 at 70.424 kb on + strand, within H281DRAFT_05932 at 70.425 kb on - strand, within H281DRAFT_05932 at 70.425 kb on - strand, within H281DRAFT_05932 at 70.426 kb on + strand, within H281DRAFT_05932 at 70.741 kb on + strand, within H281DRAFT_05932 at 70.786 kb on + strand at 70.826 kb on - strand at 70.826 kb on - strand at 71.031 kb on - strand at 71.031 kb on - strand at 71.031 kb on - strand at 71.468 kb on + strand, within H281DRAFT_05933 at 71.585 kb on + strand, within H281DRAFT_05933 at 71.585 kb on + strand, within H281DRAFT_05933 at 71.585 kb on + strand, within H281DRAFT_05933 at 71.586 kb on - strand, within H281DRAFT_05933 at 71.586 kb on - strand, within H281DRAFT_05933 at 71.742 kb on - strand, within H281DRAFT_05933 at 71.742 kb on - strand, within H281DRAFT_05933 at 72.124 kb on - strand at 72.124 kb on - strand at 72.622 kb on - strand, within H281DRAFT_05934 at 72.736 kb on - strand, within H281DRAFT_05934 at 72.931 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x remove 70,220 + H281DRAFT_05932 0.56 +0.6 70,220 + H281DRAFT_05932 0.56 +0.3 70,424 + H281DRAFT_05932 0.69 +0.2 70,425 - H281DRAFT_05932 0.69 +0.5 70,425 - H281DRAFT_05932 0.69 +0.9 70,426 + H281DRAFT_05932 0.69 +0.0 70,741 + H281DRAFT_05932 0.89 +0.1 70,786 + -0.4 70,826 - +0.8 70,826 - -0.1 71,031 - +1.3 71,031 - +0.7 71,031 - +0.4 71,468 + H281DRAFT_05933 0.49 -0.6 71,585 + H281DRAFT_05933 0.61 -0.8 71,585 + H281DRAFT_05933 0.61 +1.6 71,585 + H281DRAFT_05933 0.61 +0.0 71,586 - H281DRAFT_05933 0.61 -0.3 71,586 - H281DRAFT_05933 0.61 -0.5 71,742 - H281DRAFT_05933 0.78 -0.0 71,742 - H281DRAFT_05933 0.78 -0.4 72,124 - -0.5 72,124 - -0.4 72,622 - H281DRAFT_05934 0.64 +0.5 72,736 - H281DRAFT_05934 0.77 +1.0 72,931 + +0.4
Or see this region's nucleotide sequence