Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05221 and H281DRAFT_05222 are separated by 102 nucleotides H281DRAFT_05222 and H281DRAFT_05223 overlap by 4 nucleotides H281DRAFT_05223 and H281DRAFT_05224 are separated by 69 nucleotides
H281DRAFT_05221: H281DRAFT_05221 - Saccharopine dehydrogenase, NADP-dependent, at 182,574 to 183,680
_05221
H281DRAFT_05222: H281DRAFT_05222 - Dephospho-CoA kinase, at 183,783 to 184,403
_05222
H281DRAFT_05223: H281DRAFT_05223 - hypothetical protein, at 184,400 to 184,699
_05223
H281DRAFT_05224: H281DRAFT_05224 - magnesium transporter, at 184,769 to 185,746
_05224
Position (kb) 183
184
185 Strain fitness (log2 ratio) -2
-1
0
1
2 at 182.845 kb on - strand, within H281DRAFT_05221 at 183.090 kb on + strand, within H281DRAFT_05221 at 183.259 kb on - strand, within H281DRAFT_05221 at 183.259 kb on - strand, within H281DRAFT_05221 at 183.268 kb on + strand at 183.633 kb on + strand at 183.941 kb on - strand, within H281DRAFT_05222 at 184.266 kb on - strand, within H281DRAFT_05222 at 184.268 kb on - strand, within H281DRAFT_05222 at 184.268 kb on - strand, within H281DRAFT_05222 at 184.268 kb on - strand, within H281DRAFT_05222 at 184.276 kb on + strand, within H281DRAFT_05222 at 184.385 kb on + strand at 184.386 kb on - strand at 184.462 kb on + strand, within H281DRAFT_05223 at 184.462 kb on + strand, within H281DRAFT_05223 at 184.462 kb on + strand, within H281DRAFT_05223 at 184.652 kb on - strand, within H281DRAFT_05223 at 184.652 kb on - strand, within H281DRAFT_05223 at 184.722 kb on - strand at 184.879 kb on - strand, within H281DRAFT_05224 at 185.017 kb on + strand, within H281DRAFT_05224 at 185.018 kb on - strand, within H281DRAFT_05224 at 185.067 kb on + strand at 185.080 kb on + strand, within H281DRAFT_05224 at 185.080 kb on + strand, within H281DRAFT_05224 at 185.081 kb on - strand, within H281DRAFT_05224 at 185.081 kb on - strand, within H281DRAFT_05224 at 185.084 kb on + strand, within H281DRAFT_05224 at 185.085 kb on - strand, within H281DRAFT_05224 at 185.189 kb on + strand, within H281DRAFT_05224 at 185.325 kb on - strand, within H281DRAFT_05224
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x remove 182,845 - H281DRAFT_05221 0.24 -0.5 183,090 + H281DRAFT_05221 0.47 +0.9 183,259 - H281DRAFT_05221 0.62 -0.9 183,259 - H281DRAFT_05221 0.62 -0.1 183,268 + +1.8 183,633 + +0.2 183,941 - H281DRAFT_05222 0.25 -0.1 184,266 - H281DRAFT_05222 0.78 +0.1 184,268 - H281DRAFT_05222 0.78 +0.0 184,268 - H281DRAFT_05222 0.78 -0.4 184,268 - H281DRAFT_05222 0.78 -0.1 184,276 + H281DRAFT_05222 0.79 -0.2 184,385 + -0.1 184,386 - +1.4 184,462 + H281DRAFT_05223 0.21 -0.6 184,462 + H281DRAFT_05223 0.21 -1.3 184,462 + H281DRAFT_05223 0.21 +0.0 184,652 - H281DRAFT_05223 0.84 -0.0 184,652 - H281DRAFT_05223 0.84 -0.2 184,722 - -0.4 184,879 - H281DRAFT_05224 0.11 +0.0 185,017 + H281DRAFT_05224 0.25 -2.1 185,018 - H281DRAFT_05224 0.25 -0.5 185,067 + +1.8 185,080 + H281DRAFT_05224 0.32 +0.2 185,080 + H281DRAFT_05224 0.32 +0.5 185,081 - H281DRAFT_05224 0.32 +1.3 185,081 - H281DRAFT_05224 0.32 +1.0 185,084 + H281DRAFT_05224 0.32 +0.1 185,085 - H281DRAFT_05224 0.32 +0.3 185,189 + H281DRAFT_05224 0.43 +1.0 185,325 - H281DRAFT_05224 0.57 +0.6
Or see this region's nucleotide sequence