Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03513 and H281DRAFT_03514 are separated by 40 nucleotides H281DRAFT_03514 and H281DRAFT_03515 are separated by 216 nucleotides
H281DRAFT_03513: H281DRAFT_03513 - methyl-accepting chemotaxis sensory transducer, at 12,388 to 14,361
_03513
H281DRAFT_03514: H281DRAFT_03514 - glutathione S-transferase, at 14,402 to 15,055
_03514
H281DRAFT_03515: H281DRAFT_03515 - polyhydroxyalkanoate depolymerase, intracellular, at 15,272 to 16,735
_03515
Position (kb) 14
15
16 Strain fitness (log2 ratio) -1
0
1
2 at 13.921 kb on - strand, within H281DRAFT_03513 at 13.921 kb on - strand, within H281DRAFT_03513 at 14.000 kb on + strand, within H281DRAFT_03513 at 14.499 kb on + strand, within H281DRAFT_03514 at 14.532 kb on + strand, within H281DRAFT_03514 at 14.532 kb on + strand, within H281DRAFT_03514 at 14.533 kb on - strand, within H281DRAFT_03514 at 14.562 kb on + strand, within H281DRAFT_03514 at 14.562 kb on + strand, within H281DRAFT_03514 at 14.563 kb on - strand, within H281DRAFT_03514 at 14.563 kb on - strand, within H281DRAFT_03514 at 14.563 kb on - strand, within H281DRAFT_03514 at 14.563 kb on - strand, within H281DRAFT_03514 at 14.563 kb on - strand, within H281DRAFT_03514 at 14.610 kb on + strand, within H281DRAFT_03514 at 14.611 kb on - strand, within H281DRAFT_03514 at 14.635 kb on + strand, within H281DRAFT_03514 at 14.801 kb on + strand, within H281DRAFT_03514 at 14.804 kb on + strand, within H281DRAFT_03514 at 14.805 kb on - strand, within H281DRAFT_03514 at 14.832 kb on + strand, within H281DRAFT_03514 at 14.833 kb on - strand, within H281DRAFT_03514 at 15.018 kb on + strand at 15.046 kb on + strand at 15.047 kb on - strand at 15.056 kb on - strand at 15.060 kb on - strand at 15.674 kb on + strand, within H281DRAFT_03515 at 15.706 kb on - strand, within H281DRAFT_03515 at 15.825 kb on + strand, within H281DRAFT_03515
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x remove 13,921 - H281DRAFT_03513 0.78 +0.5 13,921 - H281DRAFT_03513 0.78 +0.4 14,000 + H281DRAFT_03513 0.82 -0.2 14,499 + H281DRAFT_03514 0.15 +0.2 14,532 + H281DRAFT_03514 0.20 -0.1 14,532 + H281DRAFT_03514 0.20 -0.2 14,533 - H281DRAFT_03514 0.20 +0.8 14,562 + H281DRAFT_03514 0.24 -0.3 14,562 + H281DRAFT_03514 0.24 +0.2 14,563 - H281DRAFT_03514 0.25 +0.1 14,563 - H281DRAFT_03514 0.25 +0.0 14,563 - H281DRAFT_03514 0.25 -0.7 14,563 - H281DRAFT_03514 0.25 +0.9 14,563 - H281DRAFT_03514 0.25 +0.9 14,610 + H281DRAFT_03514 0.32 +0.7 14,611 - H281DRAFT_03514 0.32 +0.5 14,635 + H281DRAFT_03514 0.36 -0.8 14,801 + H281DRAFT_03514 0.61 -0.4 14,804 + H281DRAFT_03514 0.61 +0.3 14,805 - H281DRAFT_03514 0.62 +0.2 14,832 + H281DRAFT_03514 0.66 -0.1 14,833 - H281DRAFT_03514 0.66 -0.8 15,018 + +1.4 15,046 + -0.2 15,047 - +0.5 15,056 - -0.2 15,060 - +1.9 15,674 + H281DRAFT_03515 0.27 +0.9 15,706 - H281DRAFT_03515 0.30 +0.7 15,825 + H281DRAFT_03515 0.38 +0.4
Or see this region's nucleotide sequence