Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03201 and H281DRAFT_03202 are separated by 325 nucleotides H281DRAFT_03202 and H281DRAFT_03203 are separated by 50 nucleotides H281DRAFT_03203 and H281DRAFT_03204 are separated by 26 nucleotides H281DRAFT_03204 and H281DRAFT_03205 are separated by 139 nucleotides
H281DRAFT_03201: H281DRAFT_03201 - transcriptional regulator, XRE family, at 250,524 to 251,303
_03201
H281DRAFT_03202: H281DRAFT_03202 - SnoaL-like domain-containing protein, at 251,629 to 251,997
_03202
H281DRAFT_03203: H281DRAFT_03203 - hypothetical protein, at 252,048 to 252,356
_03203
H281DRAFT_03204: H281DRAFT_03204 - L-fucose mutarotase, at 252,383 to 252,847
_03204
H281DRAFT_03205: H281DRAFT_03205 - putative oxidoreductase, at 252,987 to 253,418
_03205
Position (kb) 251
252 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 250.661 kb on + strand, within H281DRAFT_03201 at 251.001 kb on - strand, within H281DRAFT_03201 at 251.418 kb on + strand at 251.418 kb on + strand at 251.439 kb on + strand at 251.439 kb on + strand at 251.440 kb on - strand at 251.477 kb on + strand at 251.513 kb on + strand at 251.513 kb on + strand at 251.525 kb on - strand at 251.543 kb on + strand at 252.021 kb on + strand at 252.022 kb on - strand at 252.163 kb on + strand, within H281DRAFT_03203 at 252.164 kb on - strand, within H281DRAFT_03203 at 252.321 kb on + strand, within H281DRAFT_03203 at 252.322 kb on - strand, within H281DRAFT_03203 at 252.322 kb on - strand, within H281DRAFT_03203 at 252.388 kb on + strand at 252.389 kb on - strand at 252.420 kb on + strand at 252.420 kb on + strand at 252.420 kb on + strand at 252.420 kb on + strand at 252.421 kb on - strand at 252.421 kb on - strand at 252.464 kb on - strand, within H281DRAFT_03204 at 252.589 kb on + strand, within H281DRAFT_03204 at 252.590 kb on - strand, within H281DRAFT_03204 at 252.640 kb on + strand, within H281DRAFT_03204 at 252.640 kb on + strand, within H281DRAFT_03204 at 252.641 kb on - strand, within H281DRAFT_03204 at 252.755 kb on + strand, within H281DRAFT_03204 at 252.755 kb on + strand, within H281DRAFT_03204 at 252.845 kb on + strand at 252.913 kb on + strand at 252.913 kb on + strand at 252.913 kb on + strand at 252.913 kb on + strand at 252.913 kb on + strand at 252.914 kb on - strand at 252.931 kb on - strand at 252.965 kb on + strand at 252.966 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x remove 250,661 + H281DRAFT_03201 0.18 -0.4 251,001 - H281DRAFT_03201 0.61 +0.9 251,418 + -0.1 251,418 + -0.1 251,439 + -0.5 251,439 + -1.9 251,440 - +0.5 251,477 + -0.4 251,513 + +0.3 251,513 + -1.9 251,525 - -0.6 251,543 + +0.4 252,021 + -0.2 252,022 - +3.0 252,163 + H281DRAFT_03203 0.37 +0.3 252,164 - H281DRAFT_03203 0.38 -2.7 252,321 + H281DRAFT_03203 0.88 -1.4 252,322 - H281DRAFT_03203 0.89 -1.1 252,322 - H281DRAFT_03203 0.89 +0.7 252,388 + -0.1 252,389 - -0.2 252,420 + +0.3 252,420 + +3.2 252,420 + +0.7 252,420 + -0.5 252,421 - -0.8 252,421 - -0.7 252,464 - H281DRAFT_03204 0.17 -0.6 252,589 + H281DRAFT_03204 0.44 -0.1 252,590 - H281DRAFT_03204 0.45 -0.8 252,640 + H281DRAFT_03204 0.55 -0.4 252,640 + H281DRAFT_03204 0.55 -2.3 252,641 - H281DRAFT_03204 0.55 -1.1 252,755 + H281DRAFT_03204 0.80 +0.1 252,755 + H281DRAFT_03204 0.80 -0.8 252,845 + -0.1 252,913 + +0.1 252,913 + -0.4 252,913 + -0.1 252,913 + +0.3 252,913 + -0.4 252,914 - -0.2 252,931 - -0.2 252,965 + -0.1 252,966 - -0.2
Or see this region's nucleotide sequence