Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01711 and H281DRAFT_01712 are separated by 271 nucleotides H281DRAFT_01712 and H281DRAFT_01713 are separated by 198 nucleotides
H281DRAFT_01711: H281DRAFT_01711 - Na/Pi-cotransporter, at 596,837 to 597,793
_01711
H281DRAFT_01712: H281DRAFT_01712 - polyphosphate kinase 2, PA0141 family, at 598,065 to 598,889
_01712
H281DRAFT_01713: H281DRAFT_01713 - Lysophospholipase, at 599,088 to 600,695
_01713
Position (kb) 598
599 Strain fitness (log2 ratio) -1
0
1 at 597.146 kb on - strand, within H281DRAFT_01711 at 597.885 kb on + strand at 597.890 kb on - strand at 598.066 kb on + strand at 598.100 kb on - strand at 598.189 kb on - strand at 598.306 kb on + strand, within H281DRAFT_01712 at 598.420 kb on + strand, within H281DRAFT_01712 at 598.543 kb on + strand, within H281DRAFT_01712 at 598.610 kb on - strand, within H281DRAFT_01712 at 598.743 kb on + strand, within H281DRAFT_01712 at 598.744 kb on - strand, within H281DRAFT_01712 at 598.744 kb on - strand, within H281DRAFT_01712 at 598.744 kb on - strand, within H281DRAFT_01712 at 598.934 kb on - strand at 598.934 kb on - strand at 598.953 kb on - strand at 598.960 kb on + strand at 599.054 kb on - strand at 599.105 kb on + strand at 599.179 kb on - strand at 599.536 kb on + strand, within H281DRAFT_01713
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x remove 597,146 - H281DRAFT_01711 0.32 +0.1 597,885 + -1.1 597,890 - -0.5 598,066 + -0.4 598,100 - +0.1 598,189 - +1.5 598,306 + H281DRAFT_01712 0.29 +0.4 598,420 + H281DRAFT_01712 0.43 +0.4 598,543 + H281DRAFT_01712 0.58 -0.4 598,610 - H281DRAFT_01712 0.66 -0.5 598,743 + H281DRAFT_01712 0.82 -0.0 598,744 - H281DRAFT_01712 0.82 -0.1 598,744 - H281DRAFT_01712 0.82 -0.0 598,744 - H281DRAFT_01712 0.82 +0.5 598,934 - -0.1 598,934 - -0.1 598,953 - -0.0 598,960 + -0.7 599,054 - +0.2 599,105 + +0.5 599,179 - +0.4 599,536 + H281DRAFT_01713 0.28 -0.1
Or see this region's nucleotide sequence