Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00860 and H281DRAFT_00861 are separated by 321 nucleotides H281DRAFT_00861 and H281DRAFT_00862 are separated by 161 nucleotides
H281DRAFT_00860: H281DRAFT_00860 - phosphoserine phosphatase, at 951,225 to 952,064
_00860
H281DRAFT_00861: H281DRAFT_00861 - hypothetical protein, at 952,386 to 953,630
_00861
H281DRAFT_00862: H281DRAFT_00862 - DNA end-binding protein Ku, at 953,792 to 954,820
_00862
Position (kb) 952
953
954 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 951.570 kb on + strand, within H281DRAFT_00860 at 952.118 kb on + strand at 952.201 kb on + strand at 952.322 kb on + strand at 952.322 kb on + strand at 952.322 kb on + strand at 952.323 kb on - strand at 952.372 kb on + strand at 952.372 kb on + strand at 952.372 kb on + strand at 952.373 kb on - strand at 952.373 kb on - strand at 952.461 kb on + strand at 952.567 kb on + strand, within H281DRAFT_00861 at 952.567 kb on + strand, within H281DRAFT_00861 at 952.567 kb on + strand, within H281DRAFT_00861 at 952.623 kb on + strand, within H281DRAFT_00861 at 952.992 kb on + strand, within H281DRAFT_00861 at 953.687 kb on + strand at 953.800 kb on + strand at 953.800 kb on + strand at 953.800 kb on + strand at 953.801 kb on - strand at 953.801 kb on - strand at 953.801 kb on - strand at 953.924 kb on + strand, within H281DRAFT_00862 at 954.005 kb on + strand at 954.005 kb on + strand, within H281DRAFT_00862 at 954.005 kb on + strand, within H281DRAFT_00862 at 954.006 kb on - strand, within H281DRAFT_00862 at 954.006 kb on - strand, within H281DRAFT_00862 at 954.006 kb on - strand, within H281DRAFT_00862 at 954.068 kb on - strand, within H281DRAFT_00862 at 954.159 kb on - strand, within H281DRAFT_00862 at 954.425 kb on + strand, within H281DRAFT_00862
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x remove 951,570 + H281DRAFT_00860 0.41 -4.6 952,118 + -5.6 952,201 + +0.6 952,322 + +0.1 952,322 + -0.5 952,322 + +0.5 952,323 - +0.5 952,372 + -0.5 952,372 + -0.7 952,372 + -1.3 952,373 - +1.0 952,373 - +1.1 952,461 + +0.3 952,567 + H281DRAFT_00861 0.15 -0.6 952,567 + H281DRAFT_00861 0.15 -0.5 952,567 + H281DRAFT_00861 0.15 -0.1 952,623 + H281DRAFT_00861 0.19 +0.4 952,992 + H281DRAFT_00861 0.49 +0.5 953,687 + -0.1 953,800 + +0.4 953,800 + +0.3 953,800 + -0.5 953,801 - +0.4 953,801 - +0.4 953,801 - -0.9 953,924 + H281DRAFT_00862 0.13 -0.1 954,005 + +1.3 954,005 + H281DRAFT_00862 0.21 +0.5 954,005 + H281DRAFT_00862 0.21 -0.5 954,006 - H281DRAFT_00862 0.21 +1.6 954,006 - H281DRAFT_00862 0.21 -0.5 954,006 - H281DRAFT_00862 0.21 +0.6 954,068 - H281DRAFT_00862 0.27 +0.1 954,159 - H281DRAFT_00862 0.36 -0.3 954,425 + H281DRAFT_00862 0.62 -0.7
Or see this region's nucleotide sequence