Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00072 and H281DRAFT_00073 overlap by 50 nucleotides H281DRAFT_00073 and H281DRAFT_00074 are separated by 292 nucleotides H281DRAFT_00074 and H281DRAFT_00075 are separated by 12 nucleotides
H281DRAFT_00072: H281DRAFT_00072 - hypothetical protein, at 73,807 to 74,418
_00072
H281DRAFT_00073: H281DRAFT_00073 - hypothetical protein, at 74,369 to 74,494
_00073
H281DRAFT_00074: H281DRAFT_00074 - UDP-galactose 4-epimerase, at 74,787 to 75,809
_00074
H281DRAFT_00075: H281DRAFT_00075 - Glycosyltransferase involved in cell wall bisynthesis, at 75,822 to 76,970
_00075
Position (kb) 74
75
76 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 73.851 kb on - strand at 73.983 kb on - strand, within H281DRAFT_00072 at 74.107 kb on + strand, within H281DRAFT_00072 at 74.107 kb on + strand, within H281DRAFT_00072 at 74.108 kb on - strand, within H281DRAFT_00072 at 74.108 kb on - strand, within H281DRAFT_00072 at 74.327 kb on - strand, within H281DRAFT_00072 at 74.385 kb on + strand at 74.385 kb on + strand at 74.399 kb on - strand at 74.416 kb on + strand at 74.417 kb on - strand at 74.451 kb on + strand, within H281DRAFT_00073 at 74.620 kb on + strand at 74.620 kb on + strand at 74.646 kb on + strand at 74.647 kb on - strand at 74.647 kb on - strand at 75.101 kb on + strand, within H281DRAFT_00074 at 75.102 kb on - strand, within H281DRAFT_00074 at 75.102 kb on - strand, within H281DRAFT_00074 at 75.193 kb on + strand, within H281DRAFT_00074 at 75.416 kb on - strand, within H281DRAFT_00074 at 75.509 kb on - strand, within H281DRAFT_00074 at 75.693 kb on - strand, within H281DRAFT_00074 at 75.693 kb on - strand, within H281DRAFT_00074 at 75.824 kb on - strand at 76.164 kb on + strand, within H281DRAFT_00075 at 76.657 kb on + strand, within H281DRAFT_00075 at 76.730 kb on - strand, within H281DRAFT_00075
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x remove 73,851 - +1.7 73,983 - H281DRAFT_00072 0.29 -0.5 74,107 + H281DRAFT_00072 0.49 +0.8 74,107 + H281DRAFT_00072 0.49 -2.1 74,108 - H281DRAFT_00072 0.49 +0.6 74,108 - H281DRAFT_00072 0.49 -0.3 74,327 - H281DRAFT_00072 0.85 -1.0 74,385 + -0.2 74,385 + -0.2 74,399 - -3.9 74,416 + -0.3 74,417 - -1.0 74,451 + H281DRAFT_00073 0.65 +0.6 74,620 + -0.2 74,620 + +0.5 74,646 + +0.4 74,647 - -0.7 74,647 - +0.3 75,101 + H281DRAFT_00074 0.31 -1.4 75,102 - H281DRAFT_00074 0.31 +2.8 75,102 - H281DRAFT_00074 0.31 -0.7 75,193 + H281DRAFT_00074 0.40 +1.3 75,416 - H281DRAFT_00074 0.61 -1.2 75,509 - H281DRAFT_00074 0.71 -1.8 75,693 - H281DRAFT_00074 0.89 -0.8 75,693 - H281DRAFT_00074 0.89 -1.6 75,824 - +0.8 76,164 + H281DRAFT_00075 0.30 +0.8 76,657 + H281DRAFT_00075 0.73 -1.3 76,730 - H281DRAFT_00075 0.79 -0.7
Or see this region's nucleotide sequence