Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31415 and AZOBR_RS31420 are separated by 285 nucleotides AZOBR_RS31420 and AZOBR_RS31425 are separated by 209 nucleotides
AZOBR_RS31415: AZOBR_RS31415 - GntR family transcriptional regulator, at 415,601 to 416,383
_RS31415
AZOBR_RS31420: AZOBR_RS31420 - methylglyoxal synthase, at 416,669 to 417,103
_RS31420
AZOBR_RS31425: AZOBR_RS31425 - glucuronate isomerase, at 417,313 to 418,716
_RS31425
Position (kb) 416
417
418 Strain fitness (log2 ratio) -1
0
1 at 415.687 kb on - strand, within AZOBR_RS31415 at 415.687 kb on - strand, within AZOBR_RS31415 at 415.687 kb on - strand, within AZOBR_RS31415 at 415.687 kb on - strand, within AZOBR_RS31415 at 416.178 kb on + strand, within AZOBR_RS31415 at 416.179 kb on - strand, within AZOBR_RS31415 at 416.259 kb on + strand, within AZOBR_RS31415 at 416.259 kb on + strand, within AZOBR_RS31415 at 416.507 kb on + strand at 416.509 kb on + strand at 416.509 kb on + strand at 416.509 kb on + strand at 416.510 kb on - strand at 416.510 kb on - strand at 416.510 kb on - strand at 416.513 kb on - strand at 416.513 kb on - strand at 416.513 kb on - strand at 416.513 kb on - strand at 416.610 kb on + strand at 416.619 kb on - strand at 416.981 kb on + strand, within AZOBR_RS31420 at 416.981 kb on + strand, within AZOBR_RS31420 at 416.982 kb on - strand, within AZOBR_RS31420 at 417.204 kb on - strand at 417.494 kb on - strand, within AZOBR_RS31425 at 417.511 kb on + strand, within AZOBR_RS31425 at 417.512 kb on - strand, within AZOBR_RS31425 at 417.512 kb on - strand, within AZOBR_RS31425 at 417.512 kb on - strand, within AZOBR_RS31425 at 417.512 kb on - strand, within AZOBR_RS31425 at 418.015 kb on + strand, within AZOBR_RS31425
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 415,687 - AZOBR_RS31415 0.11 -0.6 415,687 - AZOBR_RS31415 0.11 +0.1 415,687 - AZOBR_RS31415 0.11 -0.4 415,687 - AZOBR_RS31415 0.11 +0.9 416,178 + AZOBR_RS31415 0.74 +0.2 416,179 - AZOBR_RS31415 0.74 +0.2 416,259 + AZOBR_RS31415 0.84 +0.2 416,259 + AZOBR_RS31415 0.84 +0.1 416,507 + -0.1 416,509 + +0.3 416,509 + +0.8 416,509 + +0.1 416,510 - -0.2 416,510 - -0.3 416,510 - -0.3 416,513 - +0.5 416,513 - +0.6 416,513 - +0.5 416,513 - +0.3 416,610 + -0.8 416,619 - -0.5 416,981 + AZOBR_RS31420 0.72 +0.2 416,981 + AZOBR_RS31420 0.72 -0.0 416,982 - AZOBR_RS31420 0.72 -0.1 417,204 - -0.7 417,494 - AZOBR_RS31425 0.13 -0.8 417,511 + AZOBR_RS31425 0.14 +0.6 417,512 - AZOBR_RS31425 0.14 -0.0 417,512 - AZOBR_RS31425 0.14 +0.1 417,512 - AZOBR_RS31425 0.14 -0.2 417,512 - AZOBR_RS31425 0.14 +0.3 418,015 + AZOBR_RS31425 0.50 +0.5
Or see this region's nucleotide sequence