Experiment: nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS22045 and ABZR86_RS22050 are separated by 106 nucleotides ABZR86_RS22050 and ABZR86_RS22055 are separated by 69 nucleotides
ABZR86_RS22045: ABZR86_RS22045 - tetratricopeptide repeat protein, at 370,728 to 372,464
_RS22045
ABZR86_RS22050: ABZR86_RS22050 - glutamyl-tRNA reductase, at 372,571 to 373,845
_RS22050
ABZR86_RS22055: ABZR86_RS22055 - peptide chain release factor 1, at 373,915 to 374,988
_RS22055
Position (kb) 372
373
374 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 371.587 kb on + strand, within ABZR86_RS22045 at 371.587 kb on + strand, within ABZR86_RS22045 at 371.587 kb on + strand, within ABZR86_RS22045 at 371.588 kb on - strand, within ABZR86_RS22045 at 371.588 kb on - strand, within ABZR86_RS22045 at 371.638 kb on + strand, within ABZR86_RS22045 at 371.638 kb on + strand, within ABZR86_RS22045 at 371.639 kb on - strand, within ABZR86_RS22045 at 371.639 kb on - strand, within ABZR86_RS22045 at 371.639 kb on - strand, within ABZR86_RS22045 at 371.639 kb on - strand, within ABZR86_RS22045 at 371.668 kb on + strand, within ABZR86_RS22045 at 371.669 kb on - strand, within ABZR86_RS22045 at 371.755 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.834 kb on - strand, within ABZR86_RS22045 at 372.223 kb on + strand, within ABZR86_RS22045 at 372.223 kb on + strand, within ABZR86_RS22045 at 372.224 kb on - strand, within ABZR86_RS22045 at 372.467 kb on + strand at 372.467 kb on + strand at 372.468 kb on - strand at 372.468 kb on - strand at 372.468 kb on - strand at 372.468 kb on - strand at 372.487 kb on + strand at 372.487 kb on + strand at 372.487 kb on + strand at 372.487 kb on + strand at 372.527 kb on + strand at 372.527 kb on + strand at 372.527 kb on + strand at 372.527 kb on + strand at 372.528 kb on - strand at 372.532 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 200 mM remove 371,587 + ABZR86_RS22045 0.49 -0.5 371,587 + ABZR86_RS22045 0.49 -1.5 371,587 + ABZR86_RS22045 0.49 -1.2 371,588 - ABZR86_RS22045 0.50 -1.1 371,588 - ABZR86_RS22045 0.50 -1.4 371,638 + ABZR86_RS22045 0.52 -1.6 371,638 + ABZR86_RS22045 0.52 -2.6 371,639 - ABZR86_RS22045 0.52 -1.1 371,639 - ABZR86_RS22045 0.52 -0.7 371,639 - ABZR86_RS22045 0.52 -1.1 371,639 - ABZR86_RS22045 0.52 +0.4 371,668 + ABZR86_RS22045 0.54 -2.6 371,669 - ABZR86_RS22045 0.54 -0.4 371,755 + ABZR86_RS22045 0.59 -0.7 371,779 + ABZR86_RS22045 0.61 -1.4 371,779 + ABZR86_RS22045 0.61 -1.6 371,779 + ABZR86_RS22045 0.61 -2.2 371,779 + ABZR86_RS22045 0.61 -1.7 371,779 + ABZR86_RS22045 0.61 +0.1 371,779 + ABZR86_RS22045 0.61 -1.9 371,779 + ABZR86_RS22045 0.61 -3.6 371,779 + ABZR86_RS22045 0.61 -1.8 371,779 + ABZR86_RS22045 0.61 -0.6 371,779 + ABZR86_RS22045 0.61 -2.0 371,779 + ABZR86_RS22045 0.61 -2.5 371,780 - ABZR86_RS22045 0.61 +0.2 371,780 - ABZR86_RS22045 0.61 -1.5 371,780 - ABZR86_RS22045 0.61 -0.2 371,780 - ABZR86_RS22045 0.61 -1.6 371,780 - ABZR86_RS22045 0.61 -0.4 371,780 - ABZR86_RS22045 0.61 -0.6 371,780 - ABZR86_RS22045 0.61 -1.1 371,780 - ABZR86_RS22045 0.61 -1.6 371,780 - ABZR86_RS22045 0.61 -0.6 371,780 - ABZR86_RS22045 0.61 -0.8 371,780 - ABZR86_RS22045 0.61 -0.6 371,780 - ABZR86_RS22045 0.61 -2.0 371,780 - ABZR86_RS22045 0.61 -0.9 371,834 - ABZR86_RS22045 0.64 -1.5 372,223 + ABZR86_RS22045 0.86 -0.4 372,223 + ABZR86_RS22045 0.86 -2.0 372,224 - ABZR86_RS22045 0.86 -0.7 372,467 + -1.7 372,467 + -1.3 372,468 - +0.0 372,468 - -0.9 372,468 - -0.8 372,468 - -0.5 372,487 + -1.4 372,487 + -1.0 372,487 + -0.5 372,487 + -0.6 372,527 + -0.3 372,527 + +0.1 372,527 + +0.2 372,527 + +0.4 372,528 - -0.7 372,532 + +0.5
Or see this region's nucleotide sequence