Experiment: nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS13595 and ABZR86_RS13600 are separated by 104 nucleotides ABZR86_RS13600 and ABZR86_RS13605 are separated by 120 nucleotides ABZR86_RS13605 and ABZR86_RS13610 are separated by 125 nucleotides
ABZR86_RS13595: ABZR86_RS13595 - hypothetical protein, at 3,042,407 to 3,042,958
_RS13595
ABZR86_RS13600: ABZR86_RS13600 - F0F1 ATP synthase subunit epsilon, at 3,043,063 to 3,043,488
_RS13600
ABZR86_RS13605: ABZR86_RS13605 - F0F1 ATP synthase subunit beta, at 3,043,609 to 3,045,042
_RS13605
ABZR86_RS13610: ABZR86_RS13610 - F0F1 ATP synthase subunit gamma, at 3,045,168 to 3,046,085
_RS13610
Position (kb)
3043
3044
3045
3046 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3042.620 kb on - strand, within ABZR86_RS13595 at 3042.620 kb on - strand, within ABZR86_RS13595 at 3042.620 kb on - strand, within ABZR86_RS13595 at 3042.620 kb on - strand, within ABZR86_RS13595 at 3042.620 kb on - strand, within ABZR86_RS13595 at 3042.621 kb on + strand, within ABZR86_RS13595 at 3042.621 kb on + strand, within ABZR86_RS13595 at 3042.621 kb on + strand, within ABZR86_RS13595 at 3042.621 kb on + strand, within ABZR86_RS13595 at 3042.622 kb on - strand, within ABZR86_RS13595 at 3042.622 kb on - strand, within ABZR86_RS13595 at 3042.622 kb on - strand, within ABZR86_RS13595 at 3042.622 kb on - strand, within ABZR86_RS13595 at 3042.622 kb on - strand, within ABZR86_RS13595 at 3042.622 kb on - strand, within ABZR86_RS13595 at 3042.665 kb on + strand, within ABZR86_RS13595 at 3042.665 kb on + strand, within ABZR86_RS13595 at 3042.666 kb on - strand, within ABZR86_RS13595 at 3042.666 kb on - strand, within ABZR86_RS13595 at 3042.753 kb on + strand, within ABZR86_RS13595 at 3042.816 kb on + strand, within ABZR86_RS13595 at 3043.031 kb on + strand at 3043.031 kb on + strand at 3043.031 kb on + strand at 3043.031 kb on + strand at 3043.031 kb on + strand at 3043.031 kb on + strand at 3043.031 kb on + strand at 3043.032 kb on - strand at 3043.032 kb on - strand at 3043.032 kb on - strand at 3043.032 kb on - strand at 3043.032 kb on - strand at 3043.521 kb on - strand at 3043.535 kb on - strand at 3043.573 kb on - strand at 3043.573 kb on - strand at 3043.573 kb on - strand at 3043.573 kb on - strand at 3043.576 kb on - strand at 3043.576 kb on - strand at 3043.576 kb on - strand at 3043.583 kb on - strand at 3045.107 kb on - strand at 3045.172 kb on - strand at 3045.172 kb on - strand at 3045.172 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 200 mM remove 3,042,620 - ABZR86_RS13595 0.39 +0.1 3,042,620 - ABZR86_RS13595 0.39 -0.6 3,042,620 - ABZR86_RS13595 0.39 +0.1 3,042,620 - ABZR86_RS13595 0.39 +0.4 3,042,620 - ABZR86_RS13595 0.39 -0.3 3,042,621 + ABZR86_RS13595 0.39 -0.4 3,042,621 + ABZR86_RS13595 0.39 -0.5 3,042,621 + ABZR86_RS13595 0.39 -0.2 3,042,621 + ABZR86_RS13595 0.39 -0.4 3,042,622 - ABZR86_RS13595 0.39 -2.4 3,042,622 - ABZR86_RS13595 0.39 +0.6 3,042,622 - ABZR86_RS13595 0.39 +0.5 3,042,622 - ABZR86_RS13595 0.39 -2.0 3,042,622 - ABZR86_RS13595 0.39 -0.7 3,042,622 - ABZR86_RS13595 0.39 -0.2 3,042,665 + ABZR86_RS13595 0.47 -0.5 3,042,665 + ABZR86_RS13595 0.47 -0.0 3,042,666 - ABZR86_RS13595 0.47 -0.4 3,042,666 - ABZR86_RS13595 0.47 -0.1 3,042,753 + ABZR86_RS13595 0.63 +1.8 3,042,816 + ABZR86_RS13595 0.74 -0.1 3,043,031 + -0.1 3,043,031 + -0.7 3,043,031 + +0.5 3,043,031 + -0.3 3,043,031 + -0.4 3,043,031 + -0.1 3,043,031 + -0.8 3,043,032 - -0.3 3,043,032 - -0.1 3,043,032 - +1.3 3,043,032 - -0.2 3,043,032 - -0.3 3,043,521 - +0.2 3,043,535 - -0.5 3,043,573 - +0.2 3,043,573 - +0.0 3,043,573 - +0.5 3,043,573 - -0.5 3,043,576 - +0.3 3,043,576 - -0.2 3,043,576 - +0.0 3,043,583 - -0.6 3,045,107 - -0.2 3,045,172 - +0.2 3,045,172 - -0.4 3,045,172 - -0.6
Or see this region's nucleotide sequence