Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS11005

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
2,442,577	-				-0.9
2,442,637	+				-0.5
2,442,637	+				-0.0
2,442,638	-				+0.4
2,442,638	-				-0.6
2,442,638	-				-1.5
2,442,778	+		ABZR86_RS11000	0.18	-0.1
2,442,778	+		ABZR86_RS11000	0.18	+0.1
2,442,779	-		ABZR86_RS11000	0.18	-0.1
2,442,779	-		ABZR86_RS11000	0.18	-0.4
2,442,888	-		ABZR86_RS11000	0.30	+0.7
2,442,888	-		ABZR86_RS11000	0.30	+0.1
2,443,060	+		ABZR86_RS11000	0.48	+0.4
2,443,060	+		ABZR86_RS11000	0.48	+0.2
2,443,060	+		ABZR86_RS11000	0.48	+0.1
2,443,061	-		ABZR86_RS11000	0.48	+0.6
2,443,061	-		ABZR86_RS11000	0.48	-0.1
2,443,061	-		ABZR86_RS11000	0.48	-0.7
2,443,063	+		ABZR86_RS11000	0.48	+0.3
2,443,063	+		ABZR86_RS11000	0.48	-0.1
2,443,063	+		ABZR86_RS11000	0.48	+0.3
2,443,063	+		ABZR86_RS11000	0.48	+0.1
2,443,064	-		ABZR86_RS11000	0.48	+0.4
2,443,064	-		ABZR86_RS11000	0.48	+0.5
2,443,064	-		ABZR86_RS11000	0.48	-0.1
2,443,069	+		ABZR86_RS11000	0.49	+0.2
2,443,105	+		ABZR86_RS11000	0.53	-0.8
2,443,106	-		ABZR86_RS11000	0.53	-0.1
2,443,291	+		ABZR86_RS11000	0.72	-0.2
2,443,291	+		ABZR86_RS11000	0.72	-1.3
2,443,291	+		ABZR86_RS11000	0.72	+0.3
2,443,291	+		ABZR86_RS11000	0.72	+0.3
2,443,291	+		ABZR86_RS11000	0.72	+0.7
2,443,292	-		ABZR86_RS11000	0.72	+0.5
2,443,346	+		ABZR86_RS11000	0.78	-0.0
2,443,407	-		ABZR86_RS11000	0.84	-0.0
2,443,407	-		ABZR86_RS11000	0.84	-0.5
2,443,407	-		ABZR86_RS11000	0.84	+0.2
2,443,708	+				+0.0
2,443,708	+				+0.1
2,443,708	+				+0.9
2,443,709	-				-0.4
2,443,709	-				-1.9
2,443,719	+				+0.3
2,443,719	+				-0.4
2,443,720	-				+0.1
2,443,947	+		ABZR86_RS11005	0.17	-0.9
2,444,067	+		ABZR86_RS11005	0.22	-0.5
2,444,067	+		ABZR86_RS11005	0.22	-0.3
2,444,068	-		ABZR86_RS11005	0.22	-0.6
2,444,118	+		ABZR86_RS11005	0.24	-0.8
2,444,118	+		ABZR86_RS11005	0.24	+0.3
2,444,193	+		ABZR86_RS11005	0.27	+0.8
2,444,193	+		ABZR86_RS11005	0.27	+0.0
2,444,194	-		ABZR86_RS11005	0.27	-0.5
2,444,194	-		ABZR86_RS11005	0.27	-0.2
2,444,194	-		ABZR86_RS11005	0.27	-0.1
2,444,194	-		ABZR86_RS11005	0.27	-0.5
2,444,194	-		ABZR86_RS11005	0.27	+0.0
2,444,194	-		ABZR86_RS11005	0.27	+0.5
2,444,269	-		ABZR86_RS11005	0.30	+0.3
2,444,511	+		ABZR86_RS11005	0.40	-0.5
2,444,511	+		ABZR86_RS11005	0.40	+0.0
2,444,511	+		ABZR86_RS11005	0.40	+0.3
2,444,512	-		ABZR86_RS11005	0.41	-0.5
2,444,512	-		ABZR86_RS11005	0.41	+0.2
2,444,512	-		ABZR86_RS11005	0.41	+0.0
2,444,512	-		ABZR86_RS11005	0.41	+0.2
2,444,512	-		ABZR86_RS11005	0.41	-0.1
2,444,613	+		ABZR86_RS11005	0.45	+0.2
2,444,673	+		ABZR86_RS11005	0.47	+0.1
2,444,874	+		ABZR86_RS11005	0.56	-0.3
2,444,928	+		ABZR86_RS11005	0.58	+0.9
2,444,928	+		ABZR86_RS11005	0.58	+0.6
2,444,928	+		ABZR86_RS11005	0.58	-0.6
2,444,928	+		ABZR86_RS11005	0.58	-0.4
2,444,928	+		ABZR86_RS11005	0.58	+0.1
2,444,928	+		ABZR86_RS11005	0.58	-0.2
2,444,929	-		ABZR86_RS11005	0.58	-0.3
2,444,929	-		ABZR86_RS11005	0.58	-0.4
2,444,929	-		ABZR86_RS11005	0.58	-0.7
2,444,929	-		ABZR86_RS11005	0.58	+0.3
2,444,929	-		ABZR86_RS11005	0.58	-0.0
2,444,929	-		ABZR86_RS11005	0.58	+0.2
2,444,967	+		ABZR86_RS11005	0.60	+0.2
2,444,967	+		ABZR86_RS11005	0.60	-0.6
2,444,968	-		ABZR86_RS11005	0.60	-0.5
2,444,968	-		ABZR86_RS11005	0.60	-0.1
2,444,968	-		ABZR86_RS11005	0.60	-1.0
2,444,968	-		ABZR86_RS11005	0.60	+0.1
2,445,114	+		ABZR86_RS11005	0.66	+0.4
2,445,114	+		ABZR86_RS11005	0.66	-0.4
2,445,114	+		ABZR86_RS11005	0.66	+0.3
2,445,114	+		ABZR86_RS11005	0.66	-0.1
2,445,115	-		ABZR86_RS11005	0.66	+0.0
2,445,115	-		ABZR86_RS11005	0.66	+0.1
2,445,115	-		ABZR86_RS11005	0.66	+0.4
2,445,115	-		ABZR86_RS11005	0.66	+0.3
2,445,321	+		ABZR86_RS11005	0.75	+0.6
2,445,322	-		ABZR86_RS11005	0.75	-0.3
2,445,330	+		ABZR86_RS11005	0.75	-0.2
2,445,330	+		ABZR86_RS11005	0.75	+0.0
2,445,330	+		ABZR86_RS11005	0.75	-0.5
2,445,330	+		ABZR86_RS11005	0.75	-0.0
2,445,330	+		ABZR86_RS11005	0.75	-0.2
2,445,330	+		ABZR86_RS11005	0.75	+0.6
2,445,330	+		ABZR86_RS11005	0.75	+0.3
2,445,330	+		ABZR86_RS11005	0.75	+0.2
2,445,330	+		ABZR86_RS11005	0.75	+0.2
2,445,330	+		ABZR86_RS11005	0.75	-0.1
2,445,331	-		ABZR86_RS11005	0.75	+0.4
2,445,331	-		ABZR86_RS11005	0.75	+0.0
2,445,331	-		ABZR86_RS11005	0.75	+0.2
2,445,331	-		ABZR86_RS11005	0.75	-0.1
2,445,354	+		ABZR86_RS11005	0.76	-0.1
2,445,355	-		ABZR86_RS11005	0.76	+0.2
2,445,396	+		ABZR86_RS11005	0.78	-0.2
2,445,447	+		ABZR86_RS11005	0.80	+0.6
2,445,448	-		ABZR86_RS11005	0.80	-0.4
2,445,448	-		ABZR86_RS11005	0.80	-0.9
2,445,448	-		ABZR86_RS11005	0.80	+0.0
2,445,456	+		ABZR86_RS11005	0.80	-0.6
2,445,456	+		ABZR86_RS11005	0.80	+0.7
2,445,456	+		ABZR86_RS11005	0.80	+0.5
2,445,457	-		ABZR86_RS11005	0.80	-0.4
2,445,457	-		ABZR86_RS11005	0.80	+0.3
2,445,457	-		ABZR86_RS11005	0.80	+0.3
2,445,457	-		ABZR86_RS11005	0.80	-0.2
2,445,553	+		ABZR86_RS11005	0.84	-0.3
2,445,553	+		ABZR86_RS11005	0.84	+0.6
2,445,554	-		ABZR86_RS11005	0.85	-0.4
2,445,588	+		ABZR86_RS11005	0.86	+0.4
2,445,588	+		ABZR86_RS11005	0.86	-0.5
2,445,589	-		ABZR86_RS11005	0.86	-0.7
2,445,983	+				+0.2
2,445,983	+				-0.1
2,445,983	+				-0.1
2,446,252	-		ABZR86_RS11010	0.46	-0.3
2,446,323	+		ABZR86_RS11010	0.56	+0.2
2,446,323	+		ABZR86_RS11010	0.56	+1.0
2,446,324	-		ABZR86_RS11010	0.56	-0.5
2,446,324	-		ABZR86_RS11010	0.56	+1.0
2,446,324	-		ABZR86_RS11010	0.56	+0.1
2,446,324	-		ABZR86_RS11010	0.56	+0.1
2,446,491	+		ABZR86_RS11010	0.79	-0.1
2,446,492	-		ABZR86_RS11010	0.79	-0.5
2,446,492	-		ABZR86_RS11010	0.79	-0.6
2,446,492	-		ABZR86_RS11010	0.79	+0.1
2,446,654	+				-3.0
2,446,681	+				+0.6
2,446,681	+				+0.1
2,446,681	+				+0.0
2,446,682	-				+0.1
2,446,682	-				-0.7
2,446,682	-				-0.1
2,446,682	-				+0.7
2,446,784	+		ABZR86_RS11015	0.27	-0.1
2,446,784	+		ABZR86_RS11015	0.27	+0.5
2,446,784	+		ABZR86_RS11015	0.27	+0.2
2,446,785	-		ABZR86_RS11015	0.27	+0.1
2,446,785	-		ABZR86_RS11015	0.27	+0.4
2,446,819	+		ABZR86_RS11015	0.33	-0.2