Experiment: nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS03030 and ABZR86_RS03035 are separated by 59 nucleotides ABZR86_RS03035 and ABZR86_RS03040 are separated by 74 nucleotides ABZR86_RS03040 and ABZR86_RS03045 are separated by 29 nucleotides ABZR86_RS03045 and ABZR86_RS03050 overlap by 4 nucleotides
ABZR86_RS03030: ABZR86_RS03030 - KGG domain-containing protein, at 620,272 to 620,472
_RS03030
ABZR86_RS03035: ABZR86_RS03035 - CBS domain-containing protein, at 620,532 to 620,966
_RS03035
ABZR86_RS03040: ABZR86_RS03040 - hypothetical protein, at 621,041 to 621,292
_RS03040
ABZR86_RS03045: ABZR86_RS03045 - hypothetical protein, at 621,322 to 621,630
_RS03045
ABZR86_RS03050: ABZR86_RS03050 - excinuclease ABC subunit UvrA, at 621,627 to 624,035
_RS03050
Position (kb) 621
622 Strain fitness (log2 ratio) -1
0
1 at 620.848 kb on + strand, within ABZR86_RS03035 at 621.628 kb on + strand at 621.628 kb on + strand at 621.685 kb on + strand at 621.685 kb on + strand at 621.685 kb on + strand at 621.685 kb on + strand at 621.940 kb on + strand, within ABZR86_RS03050 at 621.940 kb on + strand, within ABZR86_RS03050 at 621.940 kb on + strand, within ABZR86_RS03050 at 621.940 kb on + strand, within ABZR86_RS03050 at 621.941 kb on - strand, within ABZR86_RS03050 at 621.941 kb on - strand, within ABZR86_RS03050 at 621.941 kb on - strand, within ABZR86_RS03050 at 621.941 kb on - strand, within ABZR86_RS03050 at 621.941 kb on - strand, within ABZR86_RS03050 at 621.941 kb on - strand, within ABZR86_RS03050 at 622.171 kb on + strand, within ABZR86_RS03050 at 622.172 kb on - strand, within ABZR86_RS03050 at 622.172 kb on - strand, within ABZR86_RS03050 at 622.172 kb on - strand, within ABZR86_RS03050 at 622.172 kb on - strand, within ABZR86_RS03050 at 622.172 kb on - strand, within ABZR86_RS03050 at 622.172 kb on - strand, within ABZR86_RS03050 at 622.172 kb on - strand, within ABZR86_RS03050 at 622.172 kb on - strand, within ABZR86_RS03050 at 622.254 kb on - strand, within ABZR86_RS03050 at 622.255 kb on + strand, within ABZR86_RS03050 at 622.255 kb on + strand, within ABZR86_RS03050 at 622.255 kb on + strand, within ABZR86_RS03050 at 622.256 kb on - strand, within ABZR86_RS03050 at 622.256 kb on - strand, within ABZR86_RS03050 at 622.256 kb on - strand, within ABZR86_RS03050 at 622.256 kb on - strand, within ABZR86_RS03050 at 622.256 kb on - strand, within ABZR86_RS03050 at 622.256 kb on - strand, within ABZR86_RS03050 at 622.256 kb on - strand, within ABZR86_RS03050 at 622.256 kb on - strand, within ABZR86_RS03050 at 622.281 kb on - strand, within ABZR86_RS03050 at 622.281 kb on - strand, within ABZR86_RS03050 at 622.373 kb on + strand, within ABZR86_RS03050 at 622.373 kb on + strand, within ABZR86_RS03050 at 622.373 kb on + strand, within ABZR86_RS03050 at 622.375 kb on + strand, within ABZR86_RS03050 at 622.375 kb on + strand, within ABZR86_RS03050 at 622.375 kb on + strand, within ABZR86_RS03050 at 622.376 kb on - strand, within ABZR86_RS03050 at 622.376 kb on - strand, within ABZR86_RS03050 at 622.376 kb on - strand, within ABZR86_RS03050 at 622.376 kb on - strand, within ABZR86_RS03050 at 622.376 kb on - strand, within ABZR86_RS03050 at 622.376 kb on - strand, within ABZR86_RS03050 at 622.376 kb on - strand, within ABZR86_RS03050 at 622.376 kb on - strand, within ABZR86_RS03050 at 622.376 kb on - strand, within ABZR86_RS03050
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 200 mM remove 620,848 + ABZR86_RS03035 0.73 -0.6 621,628 + -0.3 621,628 + -0.1 621,685 + -0.3 621,685 + +0.6 621,685 + +0.2 621,685 + +0.1 621,940 + ABZR86_RS03050 0.13 +1.0 621,940 + ABZR86_RS03050 0.13 +0.9 621,940 + ABZR86_RS03050 0.13 -0.3 621,940 + ABZR86_RS03050 0.13 +0.1 621,941 - ABZR86_RS03050 0.13 -0.8 621,941 - ABZR86_RS03050 0.13 -0.3 621,941 - ABZR86_RS03050 0.13 -0.1 621,941 - ABZR86_RS03050 0.13 +0.2 621,941 - ABZR86_RS03050 0.13 -0.1 621,941 - ABZR86_RS03050 0.13 +0.4 622,171 + ABZR86_RS03050 0.23 -0.1 622,172 - ABZR86_RS03050 0.23 -0.3 622,172 - ABZR86_RS03050 0.23 +0.4 622,172 - ABZR86_RS03050 0.23 +0.5 622,172 - ABZR86_RS03050 0.23 -0.2 622,172 - ABZR86_RS03050 0.23 +0.2 622,172 - ABZR86_RS03050 0.23 +0.4 622,172 - ABZR86_RS03050 0.23 -0.3 622,172 - ABZR86_RS03050 0.23 -0.1 622,254 - ABZR86_RS03050 0.26 -0.2 622,255 + ABZR86_RS03050 0.26 -1.1 622,255 + ABZR86_RS03050 0.26 -0.7 622,255 + ABZR86_RS03050 0.26 -0.3 622,256 - ABZR86_RS03050 0.26 -0.1 622,256 - ABZR86_RS03050 0.26 +0.3 622,256 - ABZR86_RS03050 0.26 +0.8 622,256 - ABZR86_RS03050 0.26 -0.8 622,256 - ABZR86_RS03050 0.26 +0.4 622,256 - ABZR86_RS03050 0.26 +1.5 622,256 - ABZR86_RS03050 0.26 -0.4 622,256 - ABZR86_RS03050 0.26 +0.8 622,281 - ABZR86_RS03050 0.27 -0.0 622,281 - ABZR86_RS03050 0.27 +0.0 622,373 + ABZR86_RS03050 0.31 -0.3 622,373 + ABZR86_RS03050 0.31 -0.1 622,373 + ABZR86_RS03050 0.31 -0.0 622,375 + ABZR86_RS03050 0.31 +0.3 622,375 + ABZR86_RS03050 0.31 +0.3 622,375 + ABZR86_RS03050 0.31 +0.8 622,376 - ABZR86_RS03050 0.31 +0.6 622,376 - ABZR86_RS03050 0.31 -0.3 622,376 - ABZR86_RS03050 0.31 +0.0 622,376 - ABZR86_RS03050 0.31 +0.2 622,376 - ABZR86_RS03050 0.31 +0.3 622,376 - ABZR86_RS03050 0.31 +0.9 622,376 - ABZR86_RS03050 0.31 -0.2 622,376 - ABZR86_RS03050 0.31 +0.6 622,376 - ABZR86_RS03050 0.31 -0.1
Or see this region's nucleotide sequence