Experiment: MoYLS4 with benzoic 0.54 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2608 and DvMF_2609 are separated by 281 nucleotides DvMF_2609 and DvMF_2610 overlap by 1 nucleotides DvMF_2610 and DvMF_2611 overlap by 8 nucleotides
DvMF_2608: DvMF_2608 - inner-membrane translocator (RefSeq), at 3,295,961 to 3,296,869
_2608
DvMF_2609: DvMF_2609 - inner-membrane translocator (RefSeq), at 3,297,151 to 3,298,398
_2609
DvMF_2610: DvMF_2610 - ABC transporter related (RefSeq), at 3,298,398 to 3,299,210
_2610
DvMF_2611: DvMF_2611 - ABC transporter related (RefSeq), at 3,299,203 to 3,299,907
_2611
Position (kb)
3297
3298
3299 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3296.538 kb on - strand, within DvMF_2608 at 3296.848 kb on + strand at 3296.871 kb on - strand at 3296.871 kb on - strand at 3296.999 kb on - strand at 3297.127 kb on - strand at 3297.436 kb on + strand, within DvMF_2609 at 3297.568 kb on + strand, within DvMF_2609 at 3297.754 kb on - strand, within DvMF_2609 at 3298.114 kb on + strand, within DvMF_2609 at 3298.192 kb on - strand, within DvMF_2609 at 3298.714 kb on + strand, within DvMF_2610 at 3298.714 kb on - strand, within DvMF_2610 at 3298.794 kb on + strand, within DvMF_2610 at 3298.802 kb on - strand, within DvMF_2610 at 3298.915 kb on + strand, within DvMF_2610 at 3299.174 kb on + strand at 3299.390 kb on + strand, within DvMF_2611
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with benzoic 0.54 mg/ml remove 3,296,538 - DvMF_2608 0.63 -1.3 3,296,848 + -1.4 3,296,871 - -0.3 3,296,871 - -0.4 3,296,999 - -1.0 3,297,127 - -2.8 3,297,436 + DvMF_2609 0.23 -1.1 3,297,568 + DvMF_2609 0.33 -0.9 3,297,754 - DvMF_2609 0.48 -1.4 3,298,114 + DvMF_2609 0.77 -1.5 3,298,192 - DvMF_2609 0.83 -0.7 3,298,714 + DvMF_2610 0.39 -1.0 3,298,714 - DvMF_2610 0.39 +0.0 3,298,794 + DvMF_2610 0.49 -1.4 3,298,802 - DvMF_2610 0.50 -1.4 3,298,915 + DvMF_2610 0.64 -1.1 3,299,174 + -1.6 3,299,390 + DvMF_2611 0.27 -0.4
Or see this region's nucleotide sequence