Experiment: MoYLS4 with benzoic 0.54 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1857 and DvMF_1858 are separated by 576 nucleotides DvMF_1858 and DvMF_1859 are separated by 5 nucleotides
DvMF_1857: DvMF_1857 - hypothetical protein (RefSeq), at 2,270,876 to 2,271,508
_1857
DvMF_1858: DvMF_1858 - multi-sensor hybrid histidine kinase (RefSeq), at 2,272,085 to 2,275,660
_1858
DvMF_1859: DvMF_1859 - putative two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 2,275,666 to 2,277,165
_1859
Position (kb)
2272
2273
2274
2275
2276 Strain fitness (log2 ratio)
-2
-1
0
1 at 2271.271 kb on - strand, within DvMF_1857 at 2271.392 kb on + strand, within DvMF_1857 at 2271.392 kb on + strand, within DvMF_1857 at 2271.392 kb on + strand, within DvMF_1857 at 2271.488 kb on - strand at 2271.594 kb on + strand at 2271.594 kb on + strand at 2271.594 kb on + strand at 2271.594 kb on + strand at 2271.594 kb on + strand at 2271.594 kb on + strand at 2271.602 kb on - strand at 2271.602 kb on - strand at 2271.602 kb on - strand at 2271.602 kb on - strand at 2271.602 kb on - strand at 2271.642 kb on - strand at 2271.684 kb on - strand at 2271.686 kb on + strand at 2271.913 kb on - strand at 2272.042 kb on - strand at 2272.345 kb on - strand at 2272.615 kb on + strand, within DvMF_1858 at 2272.623 kb on - strand, within DvMF_1858 at 2272.683 kb on + strand, within DvMF_1858 at 2272.830 kb on + strand, within DvMF_1858 at 2272.890 kb on + strand, within DvMF_1858 at 2272.924 kb on + strand, within DvMF_1858 at 2272.962 kb on - strand, within DvMF_1858 at 2273.593 kb on + strand, within DvMF_1858 at 2273.948 kb on + strand, within DvMF_1858 at 2274.047 kb on + strand, within DvMF_1858 at 2274.193 kb on + strand, within DvMF_1858 at 2274.238 kb on - strand, within DvMF_1858 at 2274.283 kb on - strand, within DvMF_1858 at 2274.396 kb on - strand, within DvMF_1858 at 2274.405 kb on + strand, within DvMF_1858 at 2274.451 kb on - strand, within DvMF_1858 at 2274.473 kb on + strand, within DvMF_1858 at 2275.001 kb on - strand, within DvMF_1858 at 2275.003 kb on + strand, within DvMF_1858 at 2275.134 kb on + strand, within DvMF_1858 at 2275.335 kb on - strand at 2275.360 kb on + strand at 2275.368 kb on - strand at 2275.473 kb on + strand at 2275.481 kb on - strand at 2275.994 kb on + strand, within DvMF_1859 at 2276.068 kb on + strand, within DvMF_1859 at 2276.519 kb on + strand, within DvMF_1859
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with benzoic 0.54 mg/ml remove 2,271,271 - DvMF_1857 0.62 +0.2 2,271,392 + DvMF_1857 0.82 -0.7 2,271,392 + DvMF_1857 0.82 -1.6 2,271,392 + DvMF_1857 0.82 -1.0 2,271,488 - -1.9 2,271,594 + +0.2 2,271,594 + -0.4 2,271,594 + +0.0 2,271,594 + -0.3 2,271,594 + +0.1 2,271,594 + -0.0 2,271,602 - +0.3 2,271,602 - -0.1 2,271,602 - +0.2 2,271,602 - +0.3 2,271,602 - -0.0 2,271,642 - +0.2 2,271,684 - -0.6 2,271,686 + -0.1 2,271,913 - +0.2 2,272,042 - -0.0 2,272,345 - -0.6 2,272,615 + DvMF_1858 0.15 -1.0 2,272,623 - DvMF_1858 0.15 +0.4 2,272,683 + DvMF_1858 0.17 -1.0 2,272,830 + DvMF_1858 0.21 -0.5 2,272,890 + DvMF_1858 0.23 -0.8 2,272,924 + DvMF_1858 0.23 -0.2 2,272,962 - DvMF_1858 0.25 +0.2 2,273,593 + DvMF_1858 0.42 -1.4 2,273,948 + DvMF_1858 0.52 +0.0 2,274,047 + DvMF_1858 0.55 -0.4 2,274,193 + DvMF_1858 0.59 -1.6 2,274,238 - DvMF_1858 0.60 -0.1 2,274,283 - DvMF_1858 0.61 -1.7 2,274,396 - DvMF_1858 0.65 -0.6 2,274,405 + DvMF_1858 0.65 -0.1 2,274,451 - DvMF_1858 0.66 -1.3 2,274,473 + DvMF_1858 0.67 -2.4 2,275,001 - DvMF_1858 0.82 -1.1 2,275,003 + DvMF_1858 0.82 +0.9 2,275,134 + DvMF_1858 0.85 -0.5 2,275,335 - -1.0 2,275,360 + -0.6 2,275,368 - -0.3 2,275,473 + -0.9 2,275,481 - -0.7 2,275,994 + DvMF_1859 0.22 -0.3 2,276,068 + DvMF_1859 0.27 +1.0 2,276,519 + DvMF_1859 0.57 -0.4
Or see this region's nucleotide sequence