Experiment: Chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_2691 and Shewana3_2692 are separated by 106 nucleotides Shewana3_2692 and Shewana3_2693 are separated by 169 nucleotides
Shewana3_2691: Shewana3_2691 - DNA-O6-methylguanine--protein-cysteine S-methyltransferase / transcriptional regulator Ada (RefSeq), at 3,217,902 to 3,218,795
_2691
Shewana3_2692: Shewana3_2692 - streptogramin A acetyl transferase (RefSeq), at 3,218,902 to 3,219,576
_2692
Shewana3_2693: Shewana3_2693 - AraC family transcriptional regulator (RefSeq), at 3,219,746 to 3,220,582
_2693
Position (kb)
3218
3219
3220 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3218.085 kb on - strand, within Shewana3_2691 at 3218.140 kb on + strand, within Shewana3_2691 at 3218.148 kb on - strand, within Shewana3_2691 at 3218.153 kb on - strand, within Shewana3_2691 at 3218.184 kb on - strand, within Shewana3_2691 at 3218.222 kb on + strand, within Shewana3_2691 at 3218.363 kb on + strand, within Shewana3_2691 at 3218.478 kb on + strand, within Shewana3_2691 at 3218.509 kb on - strand, within Shewana3_2691 at 3218.527 kb on + strand, within Shewana3_2691 at 3218.535 kb on - strand, within Shewana3_2691 at 3218.535 kb on - strand, within Shewana3_2691 at 3218.535 kb on - strand, within Shewana3_2691 at 3218.535 kb on - strand, within Shewana3_2691 at 3218.673 kb on - strand, within Shewana3_2691 at 3218.788 kb on - strand at 3218.822 kb on - strand at 3218.864 kb on + strand at 3218.930 kb on + strand at 3219.041 kb on + strand, within Shewana3_2692 at 3219.175 kb on + strand, within Shewana3_2692 at 3219.183 kb on - strand, within Shewana3_2692 at 3219.286 kb on - strand, within Shewana3_2692 at 3219.303 kb on - strand, within Shewana3_2692 at 3219.320 kb on + strand, within Shewana3_2692 at 3219.598 kb on + strand at 3219.785 kb on - strand at 3219.792 kb on + strand at 3219.802 kb on + strand at 3219.810 kb on - strand at 3219.859 kb on - strand, within Shewana3_2693 at 3219.938 kb on - strand, within Shewana3_2693 at 3220.127 kb on - strand, within Shewana3_2693 at 3220.142 kb on - strand, within Shewana3_2693 at 3220.169 kb on + strand, within Shewana3_2693 at 3220.382 kb on - strand, within Shewana3_2693 at 3220.446 kb on + strand, within Shewana3_2693
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.16 mM remove 3,218,085 - Shewana3_2691 0.20 -1.0 3,218,140 + Shewana3_2691 0.27 -0.1 3,218,148 - Shewana3_2691 0.28 -0.4 3,218,153 - Shewana3_2691 0.28 -2.2 3,218,184 - Shewana3_2691 0.32 +2.8 3,218,222 + Shewana3_2691 0.36 -0.3 3,218,363 + Shewana3_2691 0.52 +1.2 3,218,478 + Shewana3_2691 0.64 +1.4 3,218,509 - Shewana3_2691 0.68 -1.1 3,218,527 + Shewana3_2691 0.70 +0.1 3,218,535 - Shewana3_2691 0.71 -0.7 3,218,535 - Shewana3_2691 0.71 -1.8 3,218,535 - Shewana3_2691 0.71 +0.2 3,218,535 - Shewana3_2691 0.71 -0.6 3,218,673 - Shewana3_2691 0.86 -0.7 3,218,788 - +0.4 3,218,822 - -0.4 3,218,864 + -0.7 3,218,930 + -0.5 3,219,041 + Shewana3_2692 0.21 -0.5 3,219,175 + Shewana3_2692 0.40 -0.2 3,219,183 - Shewana3_2692 0.42 -0.2 3,219,286 - Shewana3_2692 0.57 +0.2 3,219,303 - Shewana3_2692 0.59 -0.6 3,219,320 + Shewana3_2692 0.62 -1.0 3,219,598 + +0.0 3,219,785 - -0.3 3,219,792 + -1.3 3,219,802 + -1.5 3,219,810 - -0.5 3,219,859 - Shewana3_2693 0.14 +0.6 3,219,938 - Shewana3_2693 0.23 -0.1 3,220,127 - Shewana3_2693 0.46 +0.2 3,220,142 - Shewana3_2693 0.47 +0.4 3,220,169 + Shewana3_2693 0.51 -0.5 3,220,382 - Shewana3_2693 0.76 -0.4 3,220,446 + Shewana3_2693 0.84 +0.1
Or see this region's nucleotide sequence