Strain Fitness in Shewanella loihica PV-4 around Shew_3792

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,511,366	+		Shew_3791	0.85	+0.3
4,511,374	-		Shew_3791	0.86	+0.4
4,511,374	-		Shew_3791	0.86	+0.2
4,511,374	-		Shew_3791	0.86	+0.1
4,511,507	+				+0.4
4,511,507	+				+0.0
4,511,611	-				-2.0
4,511,976	-				-0.5
4,511,977	+				-0.4
4,512,197	+				-0.3
4,512,343	+		Shew_3792	0.27	-2.4
4,512,351	-		Shew_3792	0.29	-0.1
4,512,490	-		Shew_3792	0.66	-0.2
4,512,503	-		Shew_3792	0.70	+0.2
4,512,529	-		Shew_3792	0.77	-1.3
4,512,572	-		Shew_3792	0.88	-0.7
4,512,577	-				-0.1
4,512,642	-				+0.3
4,512,945	+		Shew_3793	0.26	+0.1
4,513,033	-		Shew_3793	0.34	+0.1
4,513,153	-		Shew_3793	0.44	-0.5
4,513,153	-		Shew_3793	0.44	+0.2
4,513,293	-		Shew_3793	0.57	+0.1
4,513,315	+		Shew_3793	0.59	+0.0
4,513,521	+		Shew_3793	0.77	-0.2
4,513,529	-		Shew_3793	0.77	+0.0