Strain Fitness in Shewanella loihica PV-4 around Shew_3580

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,275,839	-		Shew_3578	0.86	+0.2
4,275,839	-		Shew_3578	0.86	-0.1
4,275,972	+		Shew_3579	0.14	-0.6
4,275,980	-		Shew_3579	0.16	+0.0
4,276,096	+		Shew_3579	0.37	-0.0
4,276,096	+		Shew_3579	0.37	-0.3
4,276,291	+		Shew_3579	0.72	-0.3
4,276,299	-		Shew_3579	0.74	-0.2
4,276,363	+		Shew_3579	0.85	+0.2
4,276,371	-		Shew_3579	0.87	-1.3
4,276,475	-				-0.3
4,276,476	+				-0.5
4,276,767	-				+0.9
4,276,816	-		Shew_3580	0.11	-0.3
4,276,944	-		Shew_3580	0.20	+0.1
4,276,949	-		Shew_3580	0.20	-1.2
4,277,080	-		Shew_3580	0.29	-0.3
4,277,104	+		Shew_3580	0.31	-0.5
4,277,104	+		Shew_3580	0.31	-0.6
4,277,104	+		Shew_3580	0.31	+0.1
4,277,112	-		Shew_3580	0.31	-0.9
4,277,112	-		Shew_3580	0.31	-0.7
4,277,112	-		Shew_3580	0.31	-0.7
4,277,341	-		Shew_3580	0.47	+0.9
4,277,593	-		Shew_3580	0.65	-1.7
4,277,840	+		Shew_3580	0.82	+0.6
4,277,840	+		Shew_3580	0.82	-0.1
4,277,840	+		Shew_3580	0.82	-1.5
4,277,840	+		Shew_3580	0.82	-0.3
4,277,848	-		Shew_3580	0.82	-0.2
4,278,026	-				+0.5
4,278,034	-				-0.8
4,278,116	-				-0.2
4,278,270	+		Shew_3581	0.12	+0.2
4,278,278	-		Shew_3581	0.13	-1.4
4,278,449	+		Shew_3581	0.25	-0.3
4,278,460	+		Shew_3581	0.26	-0.6
4,278,460	+		Shew_3581	0.26	+2.9
4,278,587	-		Shew_3581	0.35	+0.0
4,278,655	-		Shew_3581	0.40	-0.8
4,278,680	-		Shew_3581	0.42	-0.3
4,278,684	+		Shew_3581	0.42	-0.1
4,278,924	+		Shew_3581	0.59	-0.3
4,278,937	+		Shew_3581	0.60	-0.1
4,278,945	-		Shew_3581	0.61	+1.3