Strain Fitness in Shewanella loihica PV-4 around Shew_3302

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,944,446	-		Shew_3301	0.54	-0.5
3,944,513	-		Shew_3301	0.64	-0.2
3,944,569	-		Shew_3301	0.72	-2.3
3,944,579	-		Shew_3301	0.74	-0.3
3,944,669	+		Shew_3301	0.88	-0.4
3,944,901	+		Shew_3302	0.30	+0.7
3,945,133	-		Shew_3302	0.79	-0.9
3,945,250	+				+0.3
3,945,250	+				-0.5
3,945,250	+				+0.1
3,945,258	-				+0.5
3,945,258	-				+0.2
3,945,258	-				-0.3
3,945,258	-				+0.1
3,945,258	-				-0.0
3,945,258	-				-0.3
3,945,258	-				-0.8
3,945,439	-		Shew_3303	0.17	-0.5
3,945,439	-		Shew_3303	0.17	-0.2
3,945,483	-		Shew_3303	0.23	-0.2
3,945,491	-		Shew_3303	0.24	-1.0
3,945,518	+		Shew_3303	0.27	-1.5
3,945,518	-		Shew_3303	0.27	-0.3
3,945,639	+		Shew_3303	0.42	+0.1
3,945,647	-		Shew_3303	0.44	+0.3
3,945,831	-		Shew_3303	0.67	+0.0
3,945,880	+		Shew_3303	0.73	+0.1