Strain Fitness in Shewanella loihica PV-4 around Shew_1339

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,549,498	+				+0.3
1,549,749	-		Shew_1338	0.13	-0.8
1,549,856	-		Shew_1338	0.30	-0.0
1,549,878	+		Shew_1338	0.34	+0.1
1,549,886	-		Shew_1338	0.35	-0.1
1,549,991	+		Shew_1338	0.52	+0.0
1,550,070	+		Shew_1338	0.64	+0.3
1,550,192	+		Shew_1338	0.84	+0.1
1,550,192	+		Shew_1338	0.84	+0.0
1,550,200	-		Shew_1338	0.85	+0.0
1,550,200	-		Shew_1338	0.85	-0.0
1,550,200	-		Shew_1338	0.85	+0.2
1,550,200	-		Shew_1338	0.85	-0.4
1,550,200	-		Shew_1338	0.85	-0.6
1,550,200	-		Shew_1338	0.85	-0.1
1,550,200	-		Shew_1338	0.85	+1.6
1,550,200	-		Shew_1338	0.85	-0.0
1,550,279	-				-0.2
1,550,610	-		Shew_1339	0.72	-0.5
1,550,613	+		Shew_1339	0.72	-1.1
1,550,862	-		Shew_1340	0.11	-0.2
1,550,898	+		Shew_1340	0.20	-0.4
1,550,898	+		Shew_1340	0.20	+0.1
1,551,053	-		Shew_1340	0.56	-0.4
1,551,053	-		Shew_1340	0.56	+0.4
1,551,182	+		Shew_1340	0.86	-0.8
1,551,182	+		Shew_1340	0.86	-0.7
1,551,182	+		Shew_1340	0.86	+1.4
1,551,182	+		Shew_1340	0.86	+0.2
1,551,190	-		Shew_1340	0.88	+0.0
1,551,190	-		Shew_1340	0.88	-0.3
1,551,190	-		Shew_1340	0.88	-0.6
1,551,190	-		Shew_1340	0.88	-0.8
1,551,190	-		Shew_1340	0.88	-0.7
1,551,515	-		Shew_1341	0.83	+1.6